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The map label for this gene is ybfF [C]

Identifier: 119715798

GI number: 119715798

Start: 1656560

End: 1657336

Strand: Direct

Name: ybfF [C]

Synonym: Noca_1562

Alternate gene names: 119715798

Gene position: 1656560-1657336 (Clockwise)

Preceding gene: 119715797

Following gene: 119715799

Centisome position: 33.23

GC content: 71.69

Gene sequence:

>777_bases
ATGCGGTGCGTGATCGTCATCCCGACCTACAACGAGGCCAGCGCACTTCCCGGGCTGCTCGCGGCTCTCGAAGCGCTCCG
AGGCACCGCGCAGCGCCCGGCGGTCGACGTCCTGGTCGTCGATGACAACAGCCCCGACGGCACCGGAGACCTGGTCCGCG
CCCACCACGGCTTCGGGAACTGGCTCAGCCTGCTCACCCGCACGTCCAAGGACGGCCTCGGTGCCGCCTACCGTGCCGGC
TTCGCCGCGGCCATCGCCGCCGGCTACGACGCGGTCGTCCAGATGGACGCCGACGGCTCCCACCCGGTCGCCGCGGTTCC
GGAGATGCTGGCGCTGCTGGACACCCACGAGGTGGTGCTCGGCTCCCGGTACGTCCCCGGTGGCGCAACCGAGAACTGGC
CGGTTCGCCGACGGGTCCTGTCCTGGTGCGCCAACTTCTATGCCCGCCGCGTACTCGCCCTGTCCACCCGGGACACCACC
TCGGGTTTCCGGGCCTGGCGCACCGACGCACTCGTCAGGGCCGGAGTCCTAGACACCGCCTCCAACGGCTACGGGTTCCA
GGTGGAGAACACGTGGCGCTGCGAACGCCTCGGTCTGCGGGTAGCCGAGCACCCGATCACGTTCACCGAGCGCACCGCCG
GCGCCTCCAAGATGAGCCCCGAGGTCGCCCGCGAGGCCGCCGCGCTCGTGCTCCGCTGGCGGATCGGCGAGATCACGCAT
CGCTCCAGCGCGCCGGGAGCCCAGTCCGCCCAAGCGACCGGCGTGAGGCCACGATGA

Upstream 100 bases:

>100_bases
GGGTACGCCGCCGACCATCCCCGGCACGGCAATGCGAGGACTAACCGAACCGGGTCCCGGCTTCATGCTTGCTTCATCGG
CGCCCGCCTACGGTCCGGTC

Downstream 100 bases:

>100_bases
CTGGGACCTACGCGGCCGAACACTCGCCCGACGCGCTCGCCGGCGCCGCGCTTTCCCCCGCGCGCCGTTCACAGATGTGG
GGGCGCCTGCGGTTCCTCGG

Product: dolichyl-phosphate beta-D-mannosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MRCVIVIPTYNEASALPGLLAALEALRGTAQRPAVDVLVVDDNSPDGTGDLVRAHHGFGNWLSLLTRTSKDGLGAAYRAG
FAAAIAAGYDAVVQMDADGSHPVAAVPEMLALLDTHEVVLGSRYVPGGATENWPVRRRVLSWCANFYARRVLALSTRDTT
SGFRAWRTDALVRAGVLDTASNGYGFQVENTWRCERLGLRVAEHPITFTERTAGASKMSPEVAREAAALVLRWRIGEITH
RSSAPGAQSAQATGVRPR

Sequences:

>Translated_258_residues
MRCVIVIPTYNEASALPGLLAALEALRGTAQRPAVDVLVVDDNSPDGTGDLVRAHHGFGNWLSLLTRTSKDGLGAAYRAG
FAAAIAAGYDAVVQMDADGSHPVAAVPEMLALLDTHEVVLGSRYVPGGATENWPVRRRVLSWCANFYARRVLALSTRDTT
SGFRAWRTDALVRAGVLDTASNGYGFQVENTWRCERLGLRVAEHPITFTERTAGASKMSPEVAREAAALVLRWRIGEITH
RSSAPGAQSAQATGVRPR
>Mature_258_residues
MRCVIVIPTYNEASALPGLLAALEALRGTAQRPAVDVLVVDDNSPDGTGDLVRAHHGFGNWLSLLTRTSKDGLGAAYRAG
FAAAIAAGYDAVVQMDADGSHPVAAVPEMLALLDTHEVVLGSRYVPGGATENWPVRRRVLSWCANFYARRVLALSTRDTT
SGFRAWRTDALVRAGVLDTASNGYGFQVENTWRCERLGLRVAEHPITFTERTAGASKMSPEVAREAAALVLRWRIGEITH
RSSAPGAQSAQATGVRPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=218, Percent_Identity=31.651376146789, Blast_Score=111, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI71999402, Length=232, Percent_Identity=34.9137931034483, Blast_Score=135, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6325441, Length=227, Percent_Identity=34.3612334801762, Blast_Score=101, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24585265, Length=231, Percent_Identity=35.0649350649351, Blast_Score=122, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 27678; Mature: 27678

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCVIVIPTYNEASALPGLLAALEALRGTAQRPAVDVLVVDDNSPDGTGDLVRAHHGFGN
CEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHCCHHH
WLSLLTRTSKDGLGAAYRAGFAAAIAAGYDAVVQMDADGSHPVAAVPEMLALLDTHEVVL
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
GSRYVPGGATENWPVRRRVLSWCANFYARRVLALSTRDTTSGFRAWRTDALVRAGVLDTA
CCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCC
SNGYGFQVENTWRCERLGLRVAEHPITFTERTAGASKMSPEVAREAAALVLRWRIGEITH
CCCCCEEECCCCCHHHHCCCHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
RSSAPGAQSAQATGVRPR
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRCVIVIPTYNEASALPGLLAALEALRGTAQRPAVDVLVVDDNSPDGTGDLVRAHHGFGN
CEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHCCHHH
WLSLLTRTSKDGLGAAYRAGFAAAIAAGYDAVVQMDADGSHPVAAVPEMLALLDTHEVVL
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
GSRYVPGGATENWPVRRRVLSWCANFYARRVLALSTRDTTSGFRAWRTDALVRAGVLDTA
CCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCC
SNGYGFQVENTWRCERLGLRVAEHPITFTERTAGASKMSPEVAREAAALVLRWRIGEITH
CCCCCEEECCCCCHHHHCCCHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
RSSAPGAQSAQATGVRPR
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]