Click here to switch to the map view.

The map label for this gene is pimB [H]

Identifier: 119715799

GI number: 119715799

Start: 1657333

End: 1659564

Strand: Direct

Name: pimB [H]

Synonym: Noca_1563

Alternate gene names: 119715799

Gene position: 1657333-1659564 (Clockwise)

Preceding gene: 119715798

Following gene: 119715800

Centisome position: 33.24

GC content: 70.52

Gene sequence:

>2232_bases
ATGACTGGGACCTACGCGGCCGAACACTCGCCCGACGCGCTCGCCGGCGCCGCGCTTTCCCCCGCGCGCCGTTCACAGAT
GTGGGGGCGCCTGCGGTTCCTCGGCTCCTGGATTCTCGCGCTCATCCTGGTTGCGGTTGCCCTGCCTCGGACCGTCGACG
TCTCCTGGCACGGCCTGCTTCCGGCGTTGCGGGCCGTGCACTGGCCGGCCCTGCTGGCCCTTGTGGCCTTGTGGCTCCTT
GGGCTCTTCGTCCACTCCTTCGTCCTGACTGCGGCAGCACCCGCCCTGACCCACCGCCGTGCCCTGACCCTCAACGTGAC
CGGCAGCGCCGTCGCCAACGTGGTCCCCCTGGGCGGGGCCGCAGGTGTCGAGCTCAACCGCCGGATGATGAAGGCCTGGG
GCATCGACACCCGTGCCTTCGCCGGCTACACCTTTCTCACCAACCTGTGGGACGTCGCGTCCAAGCTGCTCCTGCCCATG
ATTGGCGTCATCGCACTCGTCCACGCAGGCGAGACGATCACGCCCCAACTCAAGACCGCCTCAGTGCTCGCCGGCATCGC
CTTCCTCGGGCTTGCCGCTTTCGCAACGGTGCTCCTTCTCAGCCCGAGAGGAACCGCTCAACTCGGACACGGGATCGAGC
AGACGCTGCGGTTCGGGCTGCGGCTGATCGGCCGCGACCGTGCACTGGATCTGGCCGGCCGGCTCAACGACGTCCGCTCC
GAATGCGCCGGCCTGGTCGCCTCCGGATGGGTTCGAATGACGGCCGGCATCACCGGGTACGTCGCCCTGCAATGGCTCCT
CCTCGGGTTCTGCCTGCAGCTGACCGGCGCCGGAACCACCTGGCCCGAAGTGCTCGCCGGCTTCGCCGTCGAACGGCTCT
TCACGATCGTCCCCCTCACCCCAGGCGGAGTCGGCGTCGCGGACCTCGGCCTCGTCGGCGTCCTGCTGACCCTCGGCGGT
GACCCGGCCGGCGTCACCGCCGCGGCCGTGCTCTATCGCCTGTTCGTCTTCGCCGTCGAGATCCCCGTCGGCGGCGGCGT
CCTCGGAATCTGGTTCCTCGCCCAGCGCCGAACTCCCGCGCGTCCGCAGGACGCGGTGCGGTCGCTCGGCCCGACCCGCC
GGATCGCGCACGTCACCGACGTCTTCCTGCCGCGGCTCGGCGGGATCGAGACCCACGTCGACGACCTCGTCCGACACCAG
CGGGCAACCGGGCTCGACGCCCACGTCCTAACCCCCACCCCTGGCAACGGCCCCGACCCGGCATGGGTGCGCCGGATGCC
CGCCGTCGTCGCGCGCGGCACCGTCACCGAGTACGACACCATCCACGTCCACATCTCCATGTGGTCGCCCTACGGGATCG
CGGTCGCTCGCGCCGCGATGGCCGCCGGGATGCCCACCCTCATCACCGTGCACTCGATGTGGGCCGGCGCCGGCGGACTC
CTCCGGCTCATCGCGCTCGCCGGCCTCCGACGCTGGCCCGTCGCCTGGTCCGCGGTCAGCGGAGCCGCCGCCGAAGCATT
CCGACGCTCGCTGAACGGAGCCGAGGTAGCGGTGCTACCCAACGCGATCGATATCGACTCCTGGCGACCGCGTCCGGCCC
CCATCGCTCGGCGCGAGCCGCAGGCCGCTGAGGGGCCGCTCACCGTGGTGAGCGTGATGCGCCTGATGCCGCGCAAACGA
CCCCTCCAACTGCTCGACATGTTCGAGCGGATCCGCGCACTCACTCCGAACGACGATGTTCGGCTGGTCATCGTCGGTGA
CGGCCCGCTCCACAGACGGCTGCAACGCGCGGTGCGCCGACGCGGCCTCGACGAGCGCGTGCGGATCACCGGGCGCATCC
CTCGACACCAGGTGCTCGAGGAGCTACAGGCCGCCTCGCTGTACGTCGCACCCGCCCCCAAGGAATCCTTCGGAATCGCC
GCACTCGAAGCACGCTGCGCCGGCCTGCCCGTCGTCGCACACCGCCGCAGCGGCGTCGGCGAGTTCGTCCGCGACCGCGT
CGACGGCATCCTGGTCGCCAACGACACCGAGATGGTCGTCGCGATCGCCGACCTGGTGCGCGACCCGAGCCTCCGCAACC
GGTTCACCGCGCACAACCGACGCGTCGCCCCGAAGCTCGACTGGAGCGACATTCTCCGGCAAACCGATGCGCTCTACCTG
AAGGCCGCCAGCCGCGCCGTTCTCTTGACCCAAGAAATTGCCGCGCCGGTGCCAGTGATGGCGGAAGCCTGA

Upstream 100 bases:

>100_bases
AGGCCGCCGCGCTCGTGCTCCGCTGGCGGATCGGCGAGATCACGCATCGCTCCAGCGCGCCGGGAGCCCAGTCCGCCCAA
GCGACCGGCGTGAGGCCACG

Downstream 100 bases:

>100_bases
GCTCACCATGGCCACCATCGTCTCCCTGCACGCCCACCCCGACGACGAGGCACTCCTGACCGGCGGCTGGTTGGCCCAAC
GAGCCGCCGCCGGCGACCGC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: Alpha-D-mannose-alpha-(1-6)-phosphatidylmyo-inositol-mannosyltransferase; Alpha-mannosyltransferase; Alpha-manT; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]

Number of amino acids: Translated: 743; Mature: 742

Protein sequence:

>743_residues
MTGTYAAEHSPDALAGAALSPARRSQMWGRLRFLGSWILALILVAVALPRTVDVSWHGLLPALRAVHWPALLALVALWLL
GLFVHSFVLTAAAPALTHRRALTLNVTGSAVANVVPLGGAAGVELNRRMMKAWGIDTRAFAGYTFLTNLWDVASKLLLPM
IGVIALVHAGETITPQLKTASVLAGIAFLGLAAFATVLLLSPRGTAQLGHGIEQTLRFGLRLIGRDRALDLAGRLNDVRS
ECAGLVASGWVRMTAGITGYVALQWLLLGFCLQLTGAGTTWPEVLAGFAVERLFTIVPLTPGGVGVADLGLVGVLLTLGG
DPAGVTAAAVLYRLFVFAVEIPVGGGVLGIWFLAQRRTPARPQDAVRSLGPTRRIAHVTDVFLPRLGGIETHVDDLVRHQ
RATGLDAHVLTPTPGNGPDPAWVRRMPAVVARGTVTEYDTIHVHISMWSPYGIAVARAAMAAGMPTLITVHSMWAGAGGL
LRLIALAGLRRWPVAWSAVSGAAAEAFRRSLNGAEVAVLPNAIDIDSWRPRPAPIARREPQAAEGPLTVVSVMRLMPRKR
PLQLLDMFERIRALTPNDDVRLVIVGDGPLHRRLQRAVRRRGLDERVRITGRIPRHQVLEELQAASLYVAPAPKESFGIA
ALEARCAGLPVVAHRRSGVGEFVRDRVDGILVANDTEMVVAIADLVRDPSLRNRFTAHNRRVAPKLDWSDILRQTDALYL
KAASRAVLLTQEIAAPVPVMAEA

Sequences:

>Translated_743_residues
MTGTYAAEHSPDALAGAALSPARRSQMWGRLRFLGSWILALILVAVALPRTVDVSWHGLLPALRAVHWPALLALVALWLL
GLFVHSFVLTAAAPALTHRRALTLNVTGSAVANVVPLGGAAGVELNRRMMKAWGIDTRAFAGYTFLTNLWDVASKLLLPM
IGVIALVHAGETITPQLKTASVLAGIAFLGLAAFATVLLLSPRGTAQLGHGIEQTLRFGLRLIGRDRALDLAGRLNDVRS
ECAGLVASGWVRMTAGITGYVALQWLLLGFCLQLTGAGTTWPEVLAGFAVERLFTIVPLTPGGVGVADLGLVGVLLTLGG
DPAGVTAAAVLYRLFVFAVEIPVGGGVLGIWFLAQRRTPARPQDAVRSLGPTRRIAHVTDVFLPRLGGIETHVDDLVRHQ
RATGLDAHVLTPTPGNGPDPAWVRRMPAVVARGTVTEYDTIHVHISMWSPYGIAVARAAMAAGMPTLITVHSMWAGAGGL
LRLIALAGLRRWPVAWSAVSGAAAEAFRRSLNGAEVAVLPNAIDIDSWRPRPAPIARREPQAAEGPLTVVSVMRLMPRKR
PLQLLDMFERIRALTPNDDVRLVIVGDGPLHRRLQRAVRRRGLDERVRITGRIPRHQVLEELQAASLYVAPAPKESFGIA
ALEARCAGLPVVAHRRSGVGEFVRDRVDGILVANDTEMVVAIADLVRDPSLRNRFTAHNRRVAPKLDWSDILRQTDALYL
KAASRAVLLTQEIAAPVPVMAEA
>Mature_742_residues
TGTYAAEHSPDALAGAALSPARRSQMWGRLRFLGSWILALILVAVALPRTVDVSWHGLLPALRAVHWPALLALVALWLLG
LFVHSFVLTAAAPALTHRRALTLNVTGSAVANVVPLGGAAGVELNRRMMKAWGIDTRAFAGYTFLTNLWDVASKLLLPMI
GVIALVHAGETITPQLKTASVLAGIAFLGLAAFATVLLLSPRGTAQLGHGIEQTLRFGLRLIGRDRALDLAGRLNDVRSE
CAGLVASGWVRMTAGITGYVALQWLLLGFCLQLTGAGTTWPEVLAGFAVERLFTIVPLTPGGVGVADLGLVGVLLTLGGD
PAGVTAAAVLYRLFVFAVEIPVGGGVLGIWFLAQRRTPARPQDAVRSLGPTRRIAHVTDVFLPRLGGIETHVDDLVRHQR
ATGLDAHVLTPTPGNGPDPAWVRRMPAVVARGTVTEYDTIHVHISMWSPYGIAVARAAMAAGMPTLITVHSMWAGAGGLL
RLIALAGLRRWPVAWSAVSGAAAEAFRRSLNGAEVAVLPNAIDIDSWRPRPAPIARREPQAAEGPLTVVSVMRLMPRKRP
LQLLDMFERIRALTPNDDVRLVIVGDGPLHRRLQRAVRRRGLDERVRITGRIPRHQVLEELQAASLYVAPAPKESFGIAA
LEARCAGLPVVAHRRSGVGEFVRDRVDGILVANDTEMVVAIADLVRDPSLRNRFTAHNRRVAPKLDWSDILRQTDALYLK
AASRAVLLTQEIAAPVPVMAEA

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 6 of a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose resid

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17532709, Length=399, Percent_Identity=26.3157894736842, Blast_Score=96, Evalue=5e-20,
Organism=Saccharomyces cerevisiae, GI9755344, Length=394, Percent_Identity=23.3502538071066, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.57 [H]

Molecular weight: Translated: 79723; Mature: 79592

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTYAAEHSPDALAGAALSPARRSQMWGRLRFLGSWILALILVAVALPRTVDVSWHGLL
CCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHH
PALRAVHWPALLALVALWLLGLFVHSFVLTAAAPALTHRRALTLNVTGSAVANVVPLGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHEECCCCC
AGVELNRRMMKAWGIDTRAFAGYTFLTNLWDVASKLLLPMIGVIALVHAGETITPQLKTA
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
SVLAGIAFLGLAAFATVLLLSPRGTAQLGHGIEQTLRFGLRLIGRDRALDLAGRLNDVRS
HHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ECAGLVASGWVRMTAGITGYVALQWLLLGFCLQLTGAGTTWPEVLAGFAVERLFTIVPLT
HHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECC
PGGVGVADLGLVGVLLTLGGDPAGVTAAAVLYRLFVFAVEIPVGGGVLGIWFLAQRRTPA
CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC
RPQDAVRSLGPTRRIAHVTDVFLPRLGGIETHVDDLVRHQRATGLDAHVLTPTPGNGPDP
CHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCH
AWVRRMPAVVARGTVTEYDTIHVHISMWSPYGIAVARAAMAAGMPTLITVHSMWAGAGGL
HHHHHHHHHHHCCCCEECEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHH
LRLIALAGLRRWPVAWSAVSGAAAEAFRRSLNGAEVAVLPNAIDIDSWRPRPAPIARREP
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
QAAEGPLTVVSVMRLMPRKRPLQLLDMFERIRALTPNDDVRLVIVGDGPLHRRLQRAVRR
CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHH
RGLDERVRITGRIPRHQVLEELQAASLYVAPAPKESFGIAALEARCAGLPVVAHRRSGVG
CCCCCCEEEECCCCHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHCCCCEEHHCCCCHH
EFVRDRVDGILVANDTEMVVAIADLVRDPSLRNRFTAHNRRVAPKLDWSDILRQTDALYL
HHHHHHHCEEEEECCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
KAASRAVLLTQEIAAPVPVMAEA
HHCCCHHEEEHHHCCCCCCCCCC
>Mature Secondary Structure 
TGTYAAEHSPDALAGAALSPARRSQMWGRLRFLGSWILALILVAVALPRTVDVSWHGLL
CCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHH
PALRAVHWPALLALVALWLLGLFVHSFVLTAAAPALTHRRALTLNVTGSAVANVVPLGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHEECCCCC
AGVELNRRMMKAWGIDTRAFAGYTFLTNLWDVASKLLLPMIGVIALVHAGETITPQLKTA
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
SVLAGIAFLGLAAFATVLLLSPRGTAQLGHGIEQTLRFGLRLIGRDRALDLAGRLNDVRS
HHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ECAGLVASGWVRMTAGITGYVALQWLLLGFCLQLTGAGTTWPEVLAGFAVERLFTIVPLT
HHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECC
PGGVGVADLGLVGVLLTLGGDPAGVTAAAVLYRLFVFAVEIPVGGGVLGIWFLAQRRTPA
CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC
RPQDAVRSLGPTRRIAHVTDVFLPRLGGIETHVDDLVRHQRATGLDAHVLTPTPGNGPDP
CHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCH
AWVRRMPAVVARGTVTEYDTIHVHISMWSPYGIAVARAAMAAGMPTLITVHSMWAGAGGL
HHHHHHHHHHHCCCCEECEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHH
LRLIALAGLRRWPVAWSAVSGAAAEAFRRSLNGAEVAVLPNAIDIDSWRPRPAPIARREP
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
QAAEGPLTVVSVMRLMPRKRPLQLLDMFERIRALTPNDDVRLVIVGDGPLHRRLQRAVRR
CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHH
RGLDERVRITGRIPRHQVLEELQAASLYVAPAPKESFGIAALEARCAGLPVVAHRRSGVG
CCCCCCEEEECCCCHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHCCCCEEHHCCCCHH
EFVRDRVDGILVANDTEMVVAIADLVRDPSLRNRFTAHNRRVAPKLDWSDILRQTDALYL
HHHHHHHCEEEEECCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
KAASRAVLLTQEIAAPVPVMAEA
HHCCCHHEEEHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA