| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is echA12 [H]
Identifier: 119715757
GI number: 119715757
Start: 1615060
End: 1615899
Strand: Direct
Name: echA12 [H]
Synonym: Noca_1521
Alternate gene names: 119715757
Gene position: 1615060-1615899 (Clockwise)
Preceding gene: 119715753
Following gene: 119715758
Centisome position: 32.39
GC content: 74.64
Gene sequence:
>840_bases ATGCCTGAGCCCACGACCGCGTCCGCGACCGCCCCGACGCCCACCCCACCGGACCTCACCGACCTGCGCCTCGAGCGGCC CTCCGACGGGGTCGCCGTGCTCACCCTCGACAACCCCGACCAGCGCAACGCGATGTCGGATGCGATGACCTCCTCATGGG TCCGGGCGATCGACGCCCTGGCCGCCGACTCGTCGGTGCGGGTCGTGGTGGTCACCGGCGGGGGCTCGGCGTTCTGCTCC GGCGGCAACACCTCGTGGATCGCGAGCGAGCCGGACGCGACCGTCGACGAGCTGCGCACCCGGATGGTCGCGTTCTACCG GGCCTGGCTGTCGATCCGGCGCCTCGAGGTGCCGACGATCGCGGCCGTCAACGGCCCCGCGATCGGCGCGGGCCTGTGCC TGGCCCTCGCCTGCGACGTGCGGTACGCCGCCGCCGGCGCGCGGCTCGGCGCTCCGTTCGTCAAGCTCGGCATGCACGCC GGCATGGCCGGGACCTACCTGCTGCCGAACGTCGTGGGGGAGGCACACGCCCGCGACCTCCTGCTGACCGGGCGGGTCGT CGACGCCGACGAGGCACTGCGCCTGGGCCTGGTCTCCCGGGTGATCGAGCCGGAGTCCTTCCGCGACGAGGTCCTGGCGA CCGCCGCGGGGATCGCGGCCACCGCCCCGATCGCCAGCCGACTCACCAAGCTGGCGCTCGCCGACGGCGGCCACGCGGAC TTCGAGAGCTGCCTGCAGTGGGAGGCGCTCGCCCAGCCCGTCACGCTGGCCACCGCGGACCTCCAGGAGGGCATCCGGGC CGCGCAGGAGAAGCGGGCGGCGGTCTTCACCGGCCGTTGA
Upstream 100 bases:
>100_bases ACAGACCCTACGGCACCAGCGGTGAGATGCGTGTCAGGCGCACCGTGAGCGGTGAATCGGGTCACGGCGCGTCGCGGCGG CGATCAGTACGTTGGGCCCC
Downstream 100 bases:
>100_bases CGTGAGCAGGGACGTGAGGAGGCCCCCGGCCGCATCTGGACACTTGCCTTCCCCTTGCGAGTGTCCGTCCGCGGCCGAGG GCCTCATCTGCGCCCCACGC
Product: short chain enoyl-CoA hydratase / enoyl-CoA hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MPEPTTASATAPTPTPPDLTDLRLERPSDGVAVLTLDNPDQRNAMSDAMTSSWVRAIDALAADSSVRVVVVTGGGSAFCS GGNTSWIASEPDATVDELRTRMVAFYRAWLSIRRLEVPTIAAVNGPAIGAGLCLALACDVRYAAAGARLGAPFVKLGMHA GMAGTYLLPNVVGEAHARDLLLTGRVVDADEALRLGLVSRVIEPESFRDEVLATAAGIAATAPIASRLTKLALADGGHAD FESCLQWEALAQPVTLATADLQEGIRAAQEKRAAVFTGR
Sequences:
>Translated_279_residues MPEPTTASATAPTPTPPDLTDLRLERPSDGVAVLTLDNPDQRNAMSDAMTSSWVRAIDALAADSSVRVVVVTGGGSAFCS GGNTSWIASEPDATVDELRTRMVAFYRAWLSIRRLEVPTIAAVNGPAIGAGLCLALACDVRYAAAGARLGAPFVKLGMHA GMAGTYLLPNVVGEAHARDLLLTGRVVDADEALRLGLVSRVIEPESFRDEVLATAAGIAATAPIASRLTKLALADGGHAD FESCLQWEALAQPVTLATADLQEGIRAAQEKRAAVFTGR >Mature_278_residues PEPTTASATAPTPTPPDLTDLRLERPSDGVAVLTLDNPDQRNAMSDAMTSSWVRAIDALAADSSVRVVVVTGGGSAFCSG GNTSWIASEPDATVDELRTRMVAFYRAWLSIRRLEVPTIAAVNGPAIGAGLCLALACDVRYAAAGARLGAPFVKLGMHAG MAGTYLLPNVVGEAHARDLLLTGRVVDADEALRLGLVSRVIEPESFRDEVLATAAGIAATAPIASRLTKLALADGGHADF ESCLQWEALAQPVTLATADLQEGIRAAQEKRAAVFTGR
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=253, Percent_Identity=30.8300395256917, Blast_Score=115, Evalue=6e-26, Organism=Homo sapiens, GI4502327, Length=269, Percent_Identity=33.0855018587361, Blast_Score=113, Evalue=1e-25, Organism=Homo sapiens, GI70995211, Length=263, Percent_Identity=31.9391634980989, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI45643119, Length=203, Percent_Identity=29.5566502463054, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI260275230, Length=203, Percent_Identity=29.5566502463054, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI260274832, Length=203, Percent_Identity=29.5566502463054, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI31542718, Length=254, Percent_Identity=29.5275590551181, Blast_Score=95, Evalue=7e-20, Organism=Homo sapiens, GI68989263, Length=186, Percent_Identity=31.7204301075269, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI221136756, Length=207, Percent_Identity=29.4685990338164, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI221136753, Length=207, Percent_Identity=29.4685990338164, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI221307494, Length=201, Percent_Identity=29.8507462686567, Blast_Score=91, Evalue=9e-19, Organism=Homo sapiens, GI4757966, Length=201, Percent_Identity=27.363184079602, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI51538581, Length=201, Percent_Identity=27.363184079602, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI25453481, Length=201, Percent_Identity=27.363184079602, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI51538573, Length=201, Percent_Identity=27.363184079602, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI116235487, Length=210, Percent_Identity=25.7142857142857, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI20127408, Length=178, Percent_Identity=30.8988764044944, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI4757968, Length=204, Percent_Identity=26.4705882352941, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI49355787, Length=204, Percent_Identity=26.4705882352941, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI150378541, Length=258, Percent_Identity=27.1317829457364, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI261878539, Length=76, Percent_Identity=48.6842105263158, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI213417737, Length=181, Percent_Identity=25.414364640884, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI157694516, Length=181, Percent_Identity=25.414364640884, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1787659, Length=251, Percent_Identity=35.4581673306773, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1788597, Length=288, Percent_Identity=29.8611111111111, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1787660, Length=262, Percent_Identity=30.5343511450382, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1790281, Length=186, Percent_Identity=32.258064516129, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI221142681, Length=253, Percent_Identity=30.8300395256917, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788682, Length=183, Percent_Identity=35.5191256830601, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI87082183, Length=260, Percent_Identity=25.3846153846154, Blast_Score=73, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17554946, Length=262, Percent_Identity=29.7709923664122, Blast_Score=120, Evalue=7e-28, Organism=Caenorhabditis elegans, GI25145438, Length=250, Percent_Identity=31.6, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17540714, Length=228, Percent_Identity=32.4561403508772, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17536985, Length=290, Percent_Identity=28.6206896551724, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17534483, Length=260, Percent_Identity=30.3846153846154, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17558304, Length=188, Percent_Identity=33.5106382978723, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI25144276, Length=195, Percent_Identity=34.8717948717949, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17508951, Length=195, Percent_Identity=34.8717948717949, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17508953, Length=195, Percent_Identity=34.8717948717949, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17560910, Length=260, Percent_Identity=29.6153846153846, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17540306, Length=243, Percent_Identity=30.8641975308642, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17535521, Length=241, Percent_Identity=24.896265560166, Blast_Score=85, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17549921, Length=211, Percent_Identity=25.5924170616114, Blast_Score=64, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6320241, Length=190, Percent_Identity=23.6842105263158, Blast_Score=66, Evalue=7e-12, Organism=Drosophila melanogaster, GI20129971, Length=277, Percent_Identity=29.9638989169675, Blast_Score=134, Evalue=5e-32, Organism=Drosophila melanogaster, GI24653477, Length=277, Percent_Identity=29.9638989169675, Blast_Score=134, Evalue=5e-32, Organism=Drosophila melanogaster, GI24653139, Length=265, Percent_Identity=32.0754716981132, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI21357171, Length=202, Percent_Identity=32.1782178217822, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24654903, Length=172, Percent_Identity=30.2325581395349, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI19920382, Length=226, Percent_Identity=32.3008849557522, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24650670, Length=244, Percent_Identity=27.0491803278689, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI19921000, Length=182, Percent_Identity=32.4175824175824, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24583077, Length=182, Percent_Identity=32.4175824175824, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24583079, Length=182, Percent_Identity=32.4175824175824, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI19922422, Length=261, Percent_Identity=26.0536398467433, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 29074; Mature: 28943
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPTTASATAPTPTPPDLTDLRLERPSDGVAVLTLDNPDQRNAMSDAMTSSWVRAIDAL CCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH AADSSVRVVVVTGGGSAFCSGGNTSWIASEPDATVDELRTRMVAFYRAWLSIRRLEVPTI HCCCCEEEEEEECCCCEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE AAVNGPAIGAGLCLALACDVRYAAAGARLGAPFVKLGMHAGMAGTYLLPNVVGEAHARDL EECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHE LLTGRVVDADEALRLGLVSRVIEPESFRDEVLATAAGIAATAPIASRLTKLALADGGHAD EEECCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FESCLQWEALAQPVTLATADLQEGIRAAQEKRAAVFTGR HHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHCCEECCCC >Mature Secondary Structure PEPTTASATAPTPTPPDLTDLRLERPSDGVAVLTLDNPDQRNAMSDAMTSSWVRAIDAL CCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH AADSSVRVVVVTGGGSAFCSGGNTSWIASEPDATVDELRTRMVAFYRAWLSIRRLEVPTI HCCCCEEEEEEECCCCEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE AAVNGPAIGAGLCLALACDVRYAAAGARLGAPFVKLGMHAGMAGTYLLPNVVGEAHARDL EECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHE LLTGRVVDADEALRLGLVSRVIEPESFRDEVLATAAGIAATAPIASRLTKLALADGGHAD EEECCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FESCLQWEALAQPVTLATADLQEGIRAAQEKRAAVFTGR HHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]