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The map label for this gene is fdrA [H]

Identifier: 119715721

GI number: 119715721

Start: 1571137

End: 1572552

Strand: Reverse

Name: fdrA [H]

Synonym: Noca_1485

Alternate gene names: 119715721

Gene position: 1572552-1571137 (Counterclockwise)

Preceding gene: 119715722

Following gene: 119715720

Centisome position: 31.54

GC content: 76.62

Gene sequence:

>1416_bases
ATGACCACGCCCAGTCCCACCCATGTCGAGCTCCGCCCCGGCGCGTACGCCGACTCCGTGACGCTGCTCCAGGTCAGCCG
GGTCGTCCAGGGGCTGCCCGGCGTGCTCGCCGCCCAGGTCGCGATGGCGACCCCGCTCAACGTCGAGGTGCTCACCGGGA
TGGGCTTCGAGGTCCCGGCGCAGGCGGGCCCCAACGACCTCGTGGTGGCGCTCCGGCTCGAGGCGGCGGACGCGCTGCCG
GCCGCGCTCGCCGGGGTCGACCAGGCGCTGCGCGACGCGAACCGTCGCGACGAGGGTGCCGCCACGATCGCCCCGCCGCG
GACCACGGCGAGCGCGCTGCGGCGTACTCCCGATGCTGTCGCCCTCGTCTCGGTGCCGGGCGCGCACGCCTTCGTCGAGG
CGATGGACGCCGTCGAGGCGGGCCGCGACGTGATGGTCTTCAGCGACAACGTCCCGCTCGAGCAGGAGCTGGCCCTCAAG
CGGGCTGCCGCCGAGCGCGGCGTGCTGGTGATGGGGCCCGACTGCGGCACGGCGGTGGTCGACGGCGTCGGCCTCGGCTT
CGCCAACGTCGTCGAGCCCGGCCCGGTCGGCATCGTCGCGGCCTCGGGCACCGGCTGCCAGCAGCTCCTCGCCCTGCTCG
ACCACGCCGGCGTCGGGGTCACCTCCGCACTCGGCGTCGGCGGGCGCGACCTCTCCGCCGAGGTCCGTGGCCTGGCCACC
CGCGAGGCGCTGCGCCGCCTCGACGAGGACCCGGGCGTCGAGCTGATCGTGCTGATCTCCAAGCCGCCGGCGGCGGACGT
GACCGCCGAGATCGAGGCGTACGCCGCCGCCCTGGCCACGCCGGTCGAGCTCGCGCTGCTCGGCCCGGGCCGGCCCGACC
TCACGGCCGCGGCCGAGGCGGTGCTGCGGCGGCTCGGTCGCGAGGTGCCCGCCTGGCCGGTCGACCCACCCGATGTCTCC
CCGCGGGTCAACCCAGGGGCGCTGCGCGGGCTGTTCGTCGGCGGCACGCTCGCCAGCGAGGCCGCCCTGGTCGCCGGTGA
GCTGCTCGGCGAGGCCGACGGCCACACGTTCGTGGACTTCGGCGACGACGAGTACACGACCGGTCGGGCGCACCCGATGA
TCGACCCGTCGATCCGCCTCGAGCACCTCGCCCGGGCCGCAGCGGACCCGACGACCGGGGTGCTGCTGCTCGACGTCGTG
CTCGGTCACGGCGCCGAGCCCGACCCCGCCGCGTCGCTGGCCCCGGCCCTCGCCGGGGTCGCGCAACCGGTGGTGGTCGC
GGTCGTCGGCACCGCAGGCGACCCGCAGGGACGCGACCGGCAGGTCCGCGCCCTGGTGGACGCCGGCGCCGAGGTGCACC
TGTCCAACGCCGGCGCGACCCGCCGTGCGATCGAGCTGCTGGGAGGGACCCGATGA

Upstream 100 bases:

>100_bases
ACCCCGACCGCACGGCGACCCTGGCCGCCGTCGGCCACACCTCCGGACGCGGGATGCTGCAGGGCGCCCGTTTCGTCCTC
GACCACCTGAGAGGCGCCGC

Downstream 100 bases:

>100_bases
CCACCCCCGAGGCCGTCGTGAACGTCGGCGCCGACCTGCTCGCCGACGCCGTCGCCGACCAGGCCGTGCCCGTCACCCGC
GTGGACTGGCGGCCCCCGAT

Product: FdrA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MTTPSPTHVELRPGAYADSVTLLQVSRVVQGLPGVLAAQVAMATPLNVEVLTGMGFEVPAQAGPNDLVVALRLEAADALP
AALAGVDQALRDANRRDEGAATIAPPRTTASALRRTPDAVALVSVPGAHAFVEAMDAVEAGRDVMVFSDNVPLEQELALK
RAAAERGVLVMGPDCGTAVVDGVGLGFANVVEPGPVGIVAASGTGCQQLLALLDHAGVGVTSALGVGGRDLSAEVRGLAT
REALRRLDEDPGVELIVLISKPPAADVTAEIEAYAAALATPVELALLGPGRPDLTAAAEAVLRRLGREVPAWPVDPPDVS
PRVNPGALRGLFVGGTLASEAALVAGELLGEADGHTFVDFGDDEYTTGRAHPMIDPSIRLEHLARAAADPTTGVLLLDVV
LGHGAEPDPAASLAPALAGVAQPVVVAVVGTAGDPQGRDRQVRALVDAGAEVHLSNAGATRRAIELLGGTR

Sequences:

>Translated_471_residues
MTTPSPTHVELRPGAYADSVTLLQVSRVVQGLPGVLAAQVAMATPLNVEVLTGMGFEVPAQAGPNDLVVALRLEAADALP
AALAGVDQALRDANRRDEGAATIAPPRTTASALRRTPDAVALVSVPGAHAFVEAMDAVEAGRDVMVFSDNVPLEQELALK
RAAAERGVLVMGPDCGTAVVDGVGLGFANVVEPGPVGIVAASGTGCQQLLALLDHAGVGVTSALGVGGRDLSAEVRGLAT
REALRRLDEDPGVELIVLISKPPAADVTAEIEAYAAALATPVELALLGPGRPDLTAAAEAVLRRLGREVPAWPVDPPDVS
PRVNPGALRGLFVGGTLASEAALVAGELLGEADGHTFVDFGDDEYTTGRAHPMIDPSIRLEHLARAAADPTTGVLLLDVV
LGHGAEPDPAASLAPALAGVAQPVVVAVVGTAGDPQGRDRQVRALVDAGAEVHLSNAGATRRAIELLGGTR
>Mature_470_residues
TTPSPTHVELRPGAYADSVTLLQVSRVVQGLPGVLAAQVAMATPLNVEVLTGMGFEVPAQAGPNDLVVALRLEAADALPA
ALAGVDQALRDANRRDEGAATIAPPRTTASALRRTPDAVALVSVPGAHAFVEAMDAVEAGRDVMVFSDNVPLEQELALKR
AAAERGVLVMGPDCGTAVVDGVGLGFANVVEPGPVGIVAASGTGCQQLLALLDHAGVGVTSALGVGGRDLSAEVRGLATR
EALRRLDEDPGVELIVLISKPPAADVTAEIEAYAAALATPVELALLGPGRPDLTAAAEAVLRRLGREVPAWPVDPPDVSP
RVNPGALRGLFVGGTLASEAALVAGELLGEADGHTFVDFGDDEYTTGRAHPMIDPSIRLEHLARAAADPTTGVLLLDVVL
GHGAEPDPAASLAPALAGVAQPVVVAVVGTAGDPQGRDRQVRALVDAGAEVHLSNAGATRRAIELLGGTR

Specific function: Not known; multicopy suppressor of dominant negative ftsH mutations [H]

COG id: COG0074

COG function: function code C; Succinyl-CoA synthetase, alpha subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yahF and some, to bacterial sucD [H]

Homologues:

Organism=Escherichia coli, GI1786729, Length=488, Percent_Identity=38.7295081967213, Blast_Score=270, Evalue=2e-73,
Organism=Escherichia coli, GI1786513, Length=488, Percent_Identity=35.655737704918, Blast_Score=259, Evalue=3e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003781
- InterPro:   IPR005811
- InterPro:   IPR016102 [H]

Pfam domain/function: PF02629 CoA_binding; PF00549 Ligase_CoA [H]

EC number: NA

Molecular weight: Translated: 47767; Mature: 47636

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPSPTHVELRPGAYADSVTLLQVSRVVQGLPGVLAAQVAMATPLNVEVLTGMGFEVPA
CCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCC
QAGPNDLVVALRLEAADALPAALAGVDQALRDANRRDEGAATIAPPRTTASALRRTPDAV
CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHCCCCCE
ALVSVPGAHAFVEAMDAVEAGRDVMVFSDNVPLEQELALKRAAAERGVLVMGPDCGTAVV
EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEECCCCCHHHH
DGVGLGFANVVEPGPVGIVAASGTGCQQLLALLDHAGVGVTSALGVGGRDLSAEVRGLAT
HCCCCCHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHH
REALRRLDEDPGVELIVLISKPPAADVTAEIEAYAAALATPVELALLGPGRPDLTAAAEA
HHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHH
VLRRLGREVPAWPVDPPDVSPRVNPGALRGLFVGGTLASEAALVAGELLGEADGHTFVDF
HHHHHCCCCCCCCCCCCCCCCCCCCHHHEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEC
GDDEYTTGRAHPMIDPSIRLEHLARAAADPTTGVLLLDVVLGHGAEPDPAASLAPALAGV
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHH
AQPVVVAVVGTAGDPQGRDRQVRALVDAGAEVHLSNAGATRRAIELLGGTR
CCCEEEEEEECCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
TTPSPTHVELRPGAYADSVTLLQVSRVVQGLPGVLAAQVAMATPLNVEVLTGMGFEVPA
CCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCC
QAGPNDLVVALRLEAADALPAALAGVDQALRDANRRDEGAATIAPPRTTASALRRTPDAV
CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHCCCCCE
ALVSVPGAHAFVEAMDAVEAGRDVMVFSDNVPLEQELALKRAAAERGVLVMGPDCGTAVV
EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEECCCCCHHHH
DGVGLGFANVVEPGPVGIVAASGTGCQQLLALLDHAGVGVTSALGVGGRDLSAEVRGLAT
HCCCCCHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHH
REALRRLDEDPGVELIVLISKPPAADVTAEIEAYAAALATPVELALLGPGRPDLTAAAEA
HHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHH
VLRRLGREVPAWPVDPPDVSPRVNPGALRGLFVGGTLASEAALVAGELLGEADGHTFVDF
HHHHHCCCCCCCCCCCCCCCCCCCCHHHEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEC
GDDEYTTGRAHPMIDPSIRLEHLARAAADPTTGVLLLDVVLGHGAEPDPAASLAPALAGV
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHH
AQPVVVAVVGTAGDPQGRDRQVRALVDAGAEVHLSNAGATRRAIELLGGTR
CCCEEEEEEECCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7500942; 9278503; 3309887 [H]