| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is yahG [H]
Identifier: 119715720
GI number: 119715720
Start: 1569722
End: 1571140
Strand: Reverse
Name: yahG [H]
Synonym: Noca_1484
Alternate gene names: 119715720
Gene position: 1571140-1569722 (Counterclockwise)
Preceding gene: 119715721
Following gene: 119715709
Centisome position: 31.51
GC content: 74.77
Gene sequence:
>1419_bases ATGACCACCCCCGAGGCCGTCGTGAACGTCGGCGCCGACCTGCTCGCCGACGCCGTCGCCGACCAGGCCGTGCCCGTCAC CCGCGTGGACTGGCGGCCCCCGATGGACGGCACCGCCGCGGACCTCGCGACCGTCGCCGCCGACCCCCGGCGGCAGGCCG CCAACGAGCGGGCCCTGGCCGCGATGCTGGGGGTCACCGCCACCCTGGTCGACGTGCTGCCGGCCTCCGAGGCCCTCGGC CTGGAGCCGGGCCAGTTCCTGCACGCCGGCCCGCCGATCGGCTGGGACCGCGCCTCCGGCCCGCTCCGCGGCGCCCTGAT GGGCGGCGCCGCCCTCGAGGGTCTCGTCGCCGACCCGGAGGACGCGGCCGCGCTGTTCGAGGCCGGGACCAGCGTCTCCC TCGAGCCGTGCCACCACCGCTCCGCGGTCGGCCCGATGGCCGGCGTGGTGACGCCGAGCATGTGGGTGTTCGTCCTCGAG GACCCGGCCACCGGCCGGCGCAGCTACTGCTCGCTCAACGAGGGTCTCGGCAAGGTGCTGCGGTACGGCGCCTACTCCCC CGAGGTGATCACCCGGCTGCGCTGGATGGGCGACGTGCTCGGGCCGCTGCTCCAGCGCGCGGTCCGCACCGTGCGCGACT CCGAGGCCGGGCCGGTCGACGTGACCGGCATCCTCACCCAGATGCTCCAGATGGGCGACGAGGCCCACAACCGCAACCGG GCCGGCACCCTGATGCTGCTGCGCGACCTCTCCCCCGCGCTGGTCGGGTCGATCGGGTCGGCCGGGAGCGATCCGGCCGA CGTCGCCGAGGCGCTGCGCTTCATCGGCGCCAACGACCACTTCTTCCTCAACCTCGCGATGCCCGCGTGCAAGCTGGCGC TGGACGCGGCCCGCGGCATCGACGGGTCCACCATGGTCGTGGCGATGGCCCGCAACGGCACCGACTTCGGCATCCAGGTC GCGGGCACCGGCGACGAGTGGTTCACCGGCCCGGCGCAGCTGGCCGACGGCCTGTTCCTCGGCGACTACGGGCCCGAGGA CGCCAACCCCGACATCGGCGACTCGGCGATCACCGAGACCGCCGGCATCGGCGGCTTCGCGATGGCCACGGCGCCCGCGA TCGTGCGGTTCGTCGGCGGCTCGGTCCCCGACGCGCTCGCGACCACCCGCCGGATGCACGAGATCACCCTCGGCGAGAAC CCGCGGTGGTCGGTGCCGGTGCTCGAGTTCCAGGGCACGCCGACGGGCATCGACGTGACCATGGTGTGCCGGACCGGGAT CCTCCCGCAGATCAACACCGGCATGGCCGGCAAGCTGGCGGGCGTCGGCCAGGTCGGCGCCGGCCTGGTGACCCCGCCCG CCGAGATCTTCCCGAAGGCGCTGGCGCGGCTCGCGGAGTTGGCGTGTCCACGAAGCTGA
Upstream 100 bases:
>100_bases GCGACCGGCAGGTCCGCGCCCTGGTGGACGCCGGCGCCGAGGTGCACCTGTCCAACGCCGGCGCGACCCGCCGTGCGATC GAGCTGCTGGGAGGGACCCG
Downstream 100 bases:
>100_bases CTGGGTCTCGACACGCCGGTCGCGACTTCGTTCCTCAGTCGCGCGGCTCGCTCGACCACCATCAGCGGGTCCGCTGACGC GTCCCCGCTAGCGACTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MTTPEAVVNVGADLLADAVADQAVPVTRVDWRPPMDGTAADLATVAADPRRQAANERALAAMLGVTATLVDVLPASEALG LEPGQFLHAGPPIGWDRASGPLRGALMGGAALEGLVADPEDAAALFEAGTSVSLEPCHHRSAVGPMAGVVTPSMWVFVLE DPATGRRSYCSLNEGLGKVLRYGAYSPEVITRLRWMGDVLGPLLQRAVRTVRDSEAGPVDVTGILTQMLQMGDEAHNRNR AGTLMLLRDLSPALVGSIGSAGSDPADVAEALRFIGANDHFFLNLAMPACKLALDAARGIDGSTMVVAMARNGTDFGIQV AGTGDEWFTGPAQLADGLFLGDYGPEDANPDIGDSAITETAGIGGFAMATAPAIVRFVGGSVPDALATTRRMHEITLGEN PRWSVPVLEFQGTPTGIDVTMVCRTGILPQINTGMAGKLAGVGQVGAGLVTPPAEIFPKALARLAELACPRS
Sequences:
>Translated_472_residues MTTPEAVVNVGADLLADAVADQAVPVTRVDWRPPMDGTAADLATVAADPRRQAANERALAAMLGVTATLVDVLPASEALG LEPGQFLHAGPPIGWDRASGPLRGALMGGAALEGLVADPEDAAALFEAGTSVSLEPCHHRSAVGPMAGVVTPSMWVFVLE DPATGRRSYCSLNEGLGKVLRYGAYSPEVITRLRWMGDVLGPLLQRAVRTVRDSEAGPVDVTGILTQMLQMGDEAHNRNR AGTLMLLRDLSPALVGSIGSAGSDPADVAEALRFIGANDHFFLNLAMPACKLALDAARGIDGSTMVVAMARNGTDFGIQV AGTGDEWFTGPAQLADGLFLGDYGPEDANPDIGDSAITETAGIGGFAMATAPAIVRFVGGSVPDALATTRRMHEITLGEN PRWSVPVLEFQGTPTGIDVTMVCRTGILPQINTGMAGKLAGVGQVGAGLVTPPAEIFPKALARLAELACPRS >Mature_471_residues TTPEAVVNVGADLLADAVADQAVPVTRVDWRPPMDGTAADLATVAADPRRQAANERALAAMLGVTATLVDVLPASEALGL EPGQFLHAGPPIGWDRASGPLRGALMGGAALEGLVADPEDAAALFEAGTSVSLEPCHHRSAVGPMAGVVTPSMWVFVLED PATGRRSYCSLNEGLGKVLRYGAYSPEVITRLRWMGDVLGPLLQRAVRTVRDSEAGPVDVTGILTQMLQMGDEAHNRNRA GTLMLLRDLSPALVGSIGSAGSDPADVAEALRFIGANDHFFLNLAMPACKLALDAARGIDGSTMVVAMARNGTDFGIQVA GTGDEWFTGPAQLADGLFLGDYGPEDANPDIGDSAITETAGIGGFAMATAPAIVRFVGGSVPDALATTRRMHEITLGENP RWSVPVLEFQGTPTGIDVTMVCRTGILPQINTGMAGKLAGVGQVGAGLVTPPAEIFPKALARLAELACPRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ylbE [H]
Homologues:
Organism=Escherichia coli, GI1786514, Length=468, Percent_Identity=43.8034188034188, Blast_Score=381, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009499 [H]
Pfam domain/function: PF06545 DUF1116 [H]
EC number: NA
Molecular weight: Translated: 48797; Mature: 48666
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPEAVVNVGADLLADAVADQAVPVTRVDWRPPMDGTAADLATVAADPRRQAANERALA CCCHHHHHHCCHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHH AMLGVTATLVDVLPASEALGLEPGQFLHAGPPIGWDRASGPLRGALMGGAALEGLVADPE HHHHHHHHHHHHHCCHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHCCHHHHCCCCCCH DAAALFEAGTSVSLEPCHHRSAVGPMAGVVTPSMWVFVLEDPATGRRSYCSLNEGLGKVL HHHHHHHCCCCCEECCCCCCHHCCCHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH RYGAYSPEVITRLRWMGDVLGPLLQRAVRTVRDSEAGPVDVTGILTQMLQMGDEAHNRNR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHCCCC AGTLMLLRDLSPALVGSIGSAGSDPADVAEALRFIGANDHFFLNLAMPACKLALDAARGI CCEEEEEHHCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCC DGSTMVVAMARNGTDFGIQVAGTGDEWFTGPAQLADGLFLGDYGPEDANPDIGDSAITET CCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHCCCEECCCCCCCCCCCCCCHHHHHH AGIGGFAMATAPAIVRFVGGSVPDALATTRRMHEITLGENPRWSVPVLEFQGTPTGIDVT CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCCEEEEECCCCCCCEEE MVCRTGILPQINTGMAGKLAGVGQVGAGLVTPPAEIFPKALARLAELACPRS EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TTPEAVVNVGADLLADAVADQAVPVTRVDWRPPMDGTAADLATVAADPRRQAANERALA CCHHHHHHCCHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHH AMLGVTATLVDVLPASEALGLEPGQFLHAGPPIGWDRASGPLRGALMGGAALEGLVADPE HHHHHHHHHHHHHCCHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHCCHHHHCCCCCCH DAAALFEAGTSVSLEPCHHRSAVGPMAGVVTPSMWVFVLEDPATGRRSYCSLNEGLGKVL HHHHHHHCCCCCEECCCCCCHHCCCHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH RYGAYSPEVITRLRWMGDVLGPLLQRAVRTVRDSEAGPVDVTGILTQMLQMGDEAHNRNR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHCCCC AGTLMLLRDLSPALVGSIGSAGSDPADVAEALRFIGANDHFFLNLAMPACKLALDAARGI CCEEEEEHHCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCC DGSTMVVAMARNGTDFGIQVAGTGDEWFTGPAQLADGLFLGDYGPEDANPDIGDSAITET CCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHCCCEECCCCCCCCCCCCCCHHHHHH AGIGGFAMATAPAIVRFVGGSVPDALATTRRMHEITLGENPRWSVPVLEFQGTPTGIDVT CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCCEEEEECCCCCCCEEE MVCRTGILPQINTGMAGKLAGVGQVGAGLVTPPAEIFPKALARLAELACPRS EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]