| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is yeaC [H]
Identifier: 119715714
GI number: 119715714
Start: 1564502
End: 1565524
Strand: Direct
Name: yeaC [H]
Synonym: Noca_1478
Alternate gene names: 119715714
Gene position: 1564502-1565524 (Clockwise)
Preceding gene: 119715713
Following gene: 119715715
Centisome position: 31.38
GC content: 73.41
Gene sequence:
>1023_bases ATGACCGACCCCGTGTCCGATCCCGTGCCCGATCCCGTGTCGGATCCCGCGTCCGAGCGCCTGTCCGTCGCCGAGGCCGC CGACCTGGCCGGACGGGTGCTCGACGAGGTGGAGAAGGCCGTCGTCGGCAAGCGGAAGGCGCTCGTGCAGGTCCTGGCCG CCGTGCTCGCCAAGGGCCACGTGCTGCTCGAGGACTACCCCGGCCTCGGCAAGACCCTCGCGGCCCGGTCCCTGGCCCGG GCGCTCGGTATCGACTTCGCCCGCGCCCAGTTCACCCCCGACCTGCTGCCGGCCGACCTGACCGGGTCGTTCATCTACGA CCAGCGCCGCGGGGAGTTCGAGTTCCGCCGCGGGCCGCTGTTCACCGGCCTGCTGCTGGCCGACGAGATCAACCGGACGC CACCGAAGACCCAGGCCGCGCTGCTCGAGGCGATGCAGGAGCGGCAGGTCACCGTCGAGGGCGAGACGTTCCCGCTGTCC GCTCCGTTCCACGTGCTGGCCACCGCGAACCCGATCGAGTACGAGGGCACCTTCCCGCTGCCCGAGGCCCAGCTCGACCG GTTCCTGCTCCGCGTCTCCTTCGGGTACCCCAGCCCGCACGAGGAGTACGACGTGCTCGCCCGGCGGATGGCCCGCCGGC AGGAGGAGGTCGAGCTCGACCGGGTCACCGACGGCGCCGGGCTGCTGGCCATGCAGGCGGCCGTCGAGACCGTCGCCGTC GACGAGAGCGTGGGGCGGTACTGCGTGGAGCTGGCCGTCGCGACCCGGCACCACCCCGACGTGCTCACCGGCGCCTCGCC CCGCGGCTCGCTCGGGCTGGTGCTGACGGCCCGTGCGTTCGCGCTGCTGCGCGGCCGCGACTACGTCGTGCCCGAGGACG TCAAGGCGATCGCTCGGCCCGTCCTGGCGCACCGGATCACGGTCAAGCCGGAGCTCTGGATGTCGGATGCCAGCGGCCGT CGCGTGGTCGACGCGGTCCTCGGCCAGGTGCCGACCCCGACCACGCTGGACGGGCGCCGATGA
Upstream 100 bases:
>100_bases CCCGTGTCACCGGACCGGTCTGGCCGTGGGAGGGCCCACCCCGCCGCCTCACCCCGGCCGAGATCGACCGCTGCCTGACC CAGATCGAGGAGCTGTGAGC
Downstream 100 bases:
>100_bases GCCCGCTCCCGCCGGGCCGGGGCGGTCCGGCGTCCTGGCGGCCGACCACCGCGCTGGGCCGGGCCCTCGTGGTGGGCGGG CTCGGCGTGGTCGGCGCGCT
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTDPVSDPVPDPVSDPASERLSVAEAADLAGRVLDEVEKAVVGKRKALVQVLAAVLAKGHVLLEDYPGLGKTLAARSLAR ALGIDFARAQFTPDLLPADLTGSFIYDQRRGEFEFRRGPLFTGLLLADEINRTPPKTQAALLEAMQERQVTVEGETFPLS APFHVLATANPIEYEGTFPLPEAQLDRFLLRVSFGYPSPHEEYDVLARRMARRQEEVELDRVTDGAGLLAMQAAVETVAV DESVGRYCVELAVATRHHPDVLTGASPRGSLGLVLTARAFALLRGRDYVVPEDVKAIARPVLAHRITVKPELWMSDASGR RVVDAVLGQVPTPTTLDGRR
Sequences:
>Translated_340_residues MTDPVSDPVPDPVSDPASERLSVAEAADLAGRVLDEVEKAVVGKRKALVQVLAAVLAKGHVLLEDYPGLGKTLAARSLAR ALGIDFARAQFTPDLLPADLTGSFIYDQRRGEFEFRRGPLFTGLLLADEINRTPPKTQAALLEAMQERQVTVEGETFPLS APFHVLATANPIEYEGTFPLPEAQLDRFLLRVSFGYPSPHEEYDVLARRMARRQEEVELDRVTDGAGLLAMQAAVETVAV DESVGRYCVELAVATRHHPDVLTGASPRGSLGLVLTARAFALLRGRDYVVPEDVKAIARPVLAHRITVKPELWMSDASGR RVVDAVLGQVPTPTTLDGRR >Mature_339_residues TDPVSDPVPDPVSDPASERLSVAEAADLAGRVLDEVEKAVVGKRKALVQVLAAVLAKGHVLLEDYPGLGKTLAARSLARA LGIDFARAQFTPDLLPADLTGSFIYDQRRGEFEFRRGPLFTGLLLADEINRTPPKTQAALLEAMQERQVTVEGETFPLSA PFHVLATANPIEYEGTFPLPEAQLDRFLLRVSFGYPSPHEEYDVLARRMARRQEEVELDRVTDGAGLLAMQAAVETVAVD ESVGRYCVELAVATRHHPDVLTGASPRGSLGLVLTARAFALLRGRDYVVPEDVKAIARPVLAHRITVKPELWMSDASGRR VVDAVLGQVPTPTTLDGRR
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 36985; Mature: 36854
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPVSDPVPDPVSDPASERLSVAEAADLAGRVLDEVEKAVVGKRKALVQVLAAVLAKGH CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VLLEDYPGLGKTLAARSLARALGIDFARAQFTPDLLPADLTGSFIYDQRRGEFEFRRGPL EEEECCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC FTGLLLADEINRTPPKTQAALLEAMQERQVTVEGETFPLSAPFHVLATANPIEYEGTFPL HHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEECCCEEECCCCEEEEEECCCCCCCCCCCC PEAQLDRFLLRVSFGYPSPHEEYDVLARRMARRQEEVELDRVTDGAGLLAMQAAVETVAV CHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH DESVGRYCVELAVATRHHPDVLTGASPRGSLGLVLTARAFALLRGRDYVVPEDVKAIARP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHHH VLAHRITVKPELWMSDASGRRVVDAVLGQVPTPTTLDGRR HHHHEEECCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TDPVSDPVPDPVSDPASERLSVAEAADLAGRVLDEVEKAVVGKRKALVQVLAAVLAKGH CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VLLEDYPGLGKTLAARSLARALGIDFARAQFTPDLLPADLTGSFIYDQRRGEFEFRRGPL EEEECCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC FTGLLLADEINRTPPKTQAALLEAMQERQVTVEGETFPLSAPFHVLATANPIEYEGTFPL HHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEECCCEEECCCCEEEEEECCCCCCCCCCCC PEAQLDRFLLRVSFGYPSPHEEYDVLARRMARRQEEVELDRVTDGAGLLAMQAAVETVAV CHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH DESVGRYCVELAVATRHHPDVLTGASPRGSLGLVLTARAFALLRGRDYVVPEDVKAIARP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHHH VLAHRITVKPELWMSDASGRRVVDAVLGQVPTPTTLDGRR HHHHEEECCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]