Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119715715

Identifier: 119715715

GI number: 119715715

Start: 1565521

End: 1566843

Strand: Direct

Name: 119715715

Synonym: Noca_1479

Alternate gene names: NA

Gene position: 1565521-1566843 (Clockwise)

Preceding gene: 119715714

Following gene: 119715716

Centisome position: 31.4

GC content: 78.91

Gene sequence:

>1323_bases
ATGAGCCCGCTCCCGCCGGGCCGGGGCGGTCCGGCGTCCTGGCGGCCGACCACCGCGCTGGGCCGGGCCCTCGTGGTGGG
CGGGCTCGGCGTGGTCGGCGCGCTGCTGTCCGGTGAGCCCGCGGTCGTCGTGCTCGCCGCGCCGTTCGTCATGTTGGCGG
CGCTGGGGGTGGCGCACCGGCCCACCCGCGAGCCCGTCCTCGACTCCCGGCTCGACCACCTCACGCTGCGCGAGGGCGTC
GGCACCACCTCGCGGCTGAGCGTGGCCGGCGCCGAGGACGCCGAGTACCTCGTGCGGGTCACCGGGCAGCCGCCGTACGT
CGTGATGCGCCCCAGCGGCGGCCGGGTCGGCCGGCTGCTCGCCGGGGGGCAGGTGCCCGAGGTCGAGATCAGCCCGCGCC
GCTGGGGCCGGCGGATGCTGGGGGAGGAGAAGGTCGCGCTCTACACCCCGTGGGCGGGCTACCGCTTCGGCCCGGTCGGG
ATCGGCGGCCAGTGGACGCGGGTGCTGCCGACGACCGCGCCGTACGACTCGCGCGCCGAGGCCCCGCAGCCGCTCGGCCT
GGTCGGCGCGCACCGCTCGCGGCGCACCGGCAGCGGCACCGAGCTGGCGGGGATCCGGCCGTTCCAGCCCGGCGACCGGC
TCCGGCGGGTCAACTGGCGGGTCTCGCTGCGCACCCGCGACCTGCACGTCGTGACCACCCGGGCCGAGGAGGACACCGGG
GTGCTGCTGGTGCTCGACGCGCTCGCCGACCACGGCGCCTCCGACGGCGTCGACGGCGCGGCCAGCAGCCTGGACCTCGG
CGTCCGTGCGGCCTCCGCGATCGCCGAGCACCACGTGCGCCGGGGCGACCGGGTCGCGCTGCGGGTGGTCGGCCGCGGCC
ACGAGCAGGTCGGGTACGGCGCCGGTCCGCGGCACCTGCGCCGGATCCAGGACCAACTGGCGACCGTGCGGATCGGGGTC
GCCGCCGAGCCCGACTCCGGCGTCCTGCAGCTCGGCGTGACCGGCGGCGTCGTCGTCGTGGTGCTCTCCCCGATGCTCGC
CGAGCCGGTCGCCACCGTCGCCGCGACCCTGACCCGCCGCGGCGTGGCGGTGCTGGTCGTCGACACGCTCCCGCCCGACC
CCCGGCCCGACCTCCCCGGGGACGCCGACCCCACGCTCGCCGCGCTGGCCTGGCGGATGCGGATGGTGGAGCGCTCGGTG
GTGCTCGACCGGCTCGCCGCCCTCGGCTGCCCGGTCGTCGCCTGGCGCGGGCCGGGCACCATCGACGACGTGCTGCGCCG
CCTGGCCCGCCGCGGCCGGCTCCCGCGGGTGGTGGGCCGGTGA

Upstream 100 bases:

>100_bases
CGGTCAAGCCGGAGCTCTGGATGTCGGATGCCAGCGGCCGTCGCGTGGTCGACGCGGTCCTCGGCCAGGTGCCGACCCCG
ACCACGCTGGACGGGCGCCG

Downstream 100 bases:

>100_bases
ACCCCCTGCGGGGGTACGGCGAGCCGGACGACTGGGCCCGCTCCCAGGTCGCGCTGCGGATGCTGGTCCTGGCCGGGCCG
GTCGTGGCGGTGCTCGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MSPLPPGRGGPASWRPTTALGRALVVGGLGVVGALLSGEPAVVVLAAPFVMLAALGVAHRPTREPVLDSRLDHLTLREGV
GTTSRLSVAGAEDAEYLVRVTGQPPYVVMRPSGGRVGRLLAGGQVPEVEISPRRWGRRMLGEEKVALYTPWAGYRFGPVG
IGGQWTRVLPTTAPYDSRAEAPQPLGLVGAHRSRRTGSGTELAGIRPFQPGDRLRRVNWRVSLRTRDLHVVTTRAEEDTG
VLLVLDALADHGASDGVDGAASSLDLGVRAASAIAEHHVRRGDRVALRVVGRGHEQVGYGAGPRHLRRIQDQLATVRIGV
AAEPDSGVLQLGVTGGVVVVVLSPMLAEPVATVAATLTRRGVAVLVVDTLPPDPRPDLPGDADPTLAALAWRMRMVERSV
VLDRLAALGCPVVAWRGPGTIDDVLRRLARRGRLPRVVGR

Sequences:

>Translated_440_residues
MSPLPPGRGGPASWRPTTALGRALVVGGLGVVGALLSGEPAVVVLAAPFVMLAALGVAHRPTREPVLDSRLDHLTLREGV
GTTSRLSVAGAEDAEYLVRVTGQPPYVVMRPSGGRVGRLLAGGQVPEVEISPRRWGRRMLGEEKVALYTPWAGYRFGPVG
IGGQWTRVLPTTAPYDSRAEAPQPLGLVGAHRSRRTGSGTELAGIRPFQPGDRLRRVNWRVSLRTRDLHVVTTRAEEDTG
VLLVLDALADHGASDGVDGAASSLDLGVRAASAIAEHHVRRGDRVALRVVGRGHEQVGYGAGPRHLRRIQDQLATVRIGV
AAEPDSGVLQLGVTGGVVVVVLSPMLAEPVATVAATLTRRGVAVLVVDTLPPDPRPDLPGDADPTLAALAWRMRMVERSV
VLDRLAALGCPVVAWRGPGTIDDVLRRLARRGRLPRVVGR
>Mature_439_residues
SPLPPGRGGPASWRPTTALGRALVVGGLGVVGALLSGEPAVVVLAAPFVMLAALGVAHRPTREPVLDSRLDHLTLREGVG
TTSRLSVAGAEDAEYLVRVTGQPPYVVMRPSGGRVGRLLAGGQVPEVEISPRRWGRRMLGEEKVALYTPWAGYRFGPVGI
GGQWTRVLPTTAPYDSRAEAPQPLGLVGAHRSRRTGSGTELAGIRPFQPGDRLRRVNWRVSLRTRDLHVVTTRAEEDTGV
LLVLDALADHGASDGVDGAASSLDLGVRAASAIAEHHVRRGDRVALRVVGRGHEQVGYGAGPRHLRRIQDQLATVRIGVA
AEPDSGVLQLGVTGGVVVVVLSPMLAEPVATVAATLTRRGVAVLVVDTLPPDPRPDLPGDADPTLAALAWRMRMVERSVV
LDRLAALGCPVVAWRGPGTIDDVLRRLARRGRLPRVVGR

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46569; Mature: 46438

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPLPPGRGGPASWRPTTALGRALVVGGLGVVGALLSGEPAVVVLAAPFVMLAALGVAHR
CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCC
PTREPVLDSRLDHLTLREGVGTTSRLSVAGAEDAEYLVRVTGQPPYVVMRPSGGRVGRLL
CCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCCCCEEEECCCCCCEEEEE
AGGQVPEVEISPRRWGRRMLGEEKVALYTPWAGYRFGPVGIGGQWTRVLPTTAPYDSRAE
ECCCCCCEEECHHHHHHHHCCCCCEEEECCCCCCEECCCCCCCCEEEECCCCCCCCCCCC
APQPLGLVGAHRSRRTGSGTELAGIRPFQPGDRLRRVNWRVSLRTRDLHVVTTRAEEDTG
CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEEEEEECEEEEEEECCCCCCC
VLLVLDALADHGASDGVDGAASSLDLGVRAASAIAEHHVRRGDRVALRVVGRGHEQVGYG
EEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHCCCC
AGPRHLRRIQDQLATVRIGVAAEPDSGVLQLGVTGGVVVVVLSPMLAEPVATVAATLTRR
CCHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHC
GVAVLVVDTLPPDPRPDLPGDADPTLAALAWRMRMVERSVVLDRLAALGCPVVAWRGPGT
CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
IDDVLRRLARRGRLPRVVGR
HHHHHHHHHHCCCCCHHCCC
>Mature Secondary Structure 
SPLPPGRGGPASWRPTTALGRALVVGGLGVVGALLSGEPAVVVLAAPFVMLAALGVAHR
CCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCC
PTREPVLDSRLDHLTLREGVGTTSRLSVAGAEDAEYLVRVTGQPPYVVMRPSGGRVGRLL
CCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCCCCEEEECCCCCCEEEEE
AGGQVPEVEISPRRWGRRMLGEEKVALYTPWAGYRFGPVGIGGQWTRVLPTTAPYDSRAE
ECCCCCCEEECHHHHHHHHCCCCCEEEECCCCCCEECCCCCCCCEEEECCCCCCCCCCCC
APQPLGLVGAHRSRRTGSGTELAGIRPFQPGDRLRRVNWRVSLRTRDLHVVTTRAEEDTG
CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEEEEEECEEEEEEECCCCCCC
VLLVLDALADHGASDGVDGAASSLDLGVRAASAIAEHHVRRGDRVALRVVGRGHEQVGYG
EEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHCCCC
AGPRHLRRIQDQLATVRIGVAAEPDSGVLQLGVTGGVVVVVLSPMLAEPVATVAATLTRR
CCHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHC
GVAVLVVDTLPPDPRPDLPGDADPTLAALAWRMRMVERSVVLDRLAALGCPVVAWRGPGT
CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
IDDVLRRLARRGRLPRVVGR
HHHHHHHHHHCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA