| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715712
Identifier: 119715712
GI number: 119715712
Start: 1563307
End: 1564044
Strand: Direct
Name: 119715712
Synonym: Noca_1476
Alternate gene names: NA
Gene position: 1563307-1564044 (Clockwise)
Preceding gene: 119715711
Following gene: 119715713
Centisome position: 31.35
GC content: 76.96
Gene sequence:
>738_bases ATGACCGCGCGGCAGGCTTCGACCCTGGCCGTCGCGTCGGTCGTCGCGACCGCGCTGCTGGTCGTGGTCCTGGGTGCCTG GGCCGCCTCGATCGGGCCCAGCGGCGTGCTCCGCGGGGAGGGGCCGTCGCCGGCGGGCACGCCGACCGTCACCGAGTCGA CCTCCGCCTCCGCGGGCCCGGCTGCCGTCGACACCACGTCTGCGGAGTCCCGCGGCACGCCGCCCTGGGTCCGGGCGTTC GCGCTGCTCGTCGACCTCGCGGTGGTCGTCGGCCTGGTCCTGCTCGCGGCCCGCTACGCCGTGCTGCCCGCGGTGCGCTC CGTCCGGAGGCGGCGCCGGGCGCGGCTGCGGCGTACGACGGAGTCGCTCGACTTCCCCGTCCTGGAGCCGCCCGCGGCGG TCGCGCAGGAGATCCTCGCCGATGCCGCGAGCCAGCGCCGCCTGCTCGCCGAGGGCGGCAGCCCCCGCAACGCGGTCGTC GAGTGCTGGCACCGGTTCGAGACCCAGGCTGCGGCCGCCGGGCTCGCCCGCGGCGCGTGGGAGACGTCCTCGGAGTACAC GATGCGCGTGCTGGACCTCGTCGACGCCCACCAGCCGGCGGTCACCCGCCTCGGCGAGCTCTACCGGGAGGCCCGGTTCT CCGAGCACCCGCTGACCGAGGCCCACCGGCAGGAGGCGCTCGCGGCGCTCGACGACATCCACCGCACGATCGGCCGCTCC TTCGGGGTCCACGCATGA
Upstream 100 bases:
>100_bases GAGCGTCCCGGAGGCTCGGCACTTGCCTCCGCCTGCTCGACGACGACGGCCCCGCCCGACCCGGGCGGGGCCGTCGTCGT GGTCGGGTAGTTTGCGATCC
Downstream 100 bases:
>100_bases TCGCGCGACGCTGGTGGCGCCGACTGGTCGGCGGCACGGTGGCGTACGCCGCCCTCGAGGTCGGCCTCGAGCTTGCGAGC GCGGACCCCGACCCGGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MTARQASTLAVASVVATALLVVVLGAWAASIGPSGVLRGEGPSPAGTPTVTESTSASAGPAAVDTTSAESRGTPPWVRAF ALLVDLAVVVGLVLLAARYAVLPAVRSVRRRRRARLRRTTESLDFPVLEPPAAVAQEILADAASQRRLLAEGGSPRNAVV ECWHRFETQAAAAGLARGAWETSSEYTMRVLDLVDAHQPAVTRLGELYREARFSEHPLTEAHRQEALAALDDIHRTIGRS FGVHA
Sequences:
>Translated_245_residues MTARQASTLAVASVVATALLVVVLGAWAASIGPSGVLRGEGPSPAGTPTVTESTSASAGPAAVDTTSAESRGTPPWVRAF ALLVDLAVVVGLVLLAARYAVLPAVRSVRRRRRARLRRTTESLDFPVLEPPAAVAQEILADAASQRRLLAEGGSPRNAVV ECWHRFETQAAAAGLARGAWETSSEYTMRVLDLVDAHQPAVTRLGELYREARFSEHPLTEAHRQEALAALDDIHRTIGRS FGVHA >Mature_244_residues TARQASTLAVASVVATALLVVVLGAWAASIGPSGVLRGEGPSPAGTPTVTESTSASAGPAAVDTTSAESRGTPPWVRAFA LLVDLAVVVGLVLLAARYAVLPAVRSVRRRRRARLRRTTESLDFPVLEPPAAVAQEILADAASQRRLLAEGGSPRNAVVE CWHRFETQAAAAGLARGAWETSSEYTMRVLDLVDAHQPAVTRLGELYREARFSEHPLTEAHRQEALAALDDIHRTIGRSF GVHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25938; Mature: 25807
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARQASTLAVASVVATALLVVVLGAWAASIGPSGVLRGEGPSPAGTPTVTESTSASAGP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAVDTTSAESRGTPPWVRAFALLVDLAVVVGLVLLAARYAVLPAVRSVRRRRRARLRRTT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESLDFPVLEPPAAVAQEILADAASQRRLLAEGGSPRNAVVECWHRFETQAAAAGLARGAW HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC ETSSEYTMRVLDLVDAHQPAVTRLGELYREARFSEHPLTEAHRQEALAALDDIHRTIGRS CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH FGVHA CCCCC >Mature Secondary Structure TARQASTLAVASVVATALLVVVLGAWAASIGPSGVLRGEGPSPAGTPTVTESTSASAGP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAVDTTSAESRGTPPWVRAFALLVDLAVVVGLVLLAARYAVLPAVRSVRRRRRARLRRTT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESLDFPVLEPPAAVAQEILADAASQRRLLAEGGSPRNAVVECWHRFETQAAAAGLARGAW HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC ETSSEYTMRVLDLVDAHQPAVTRLGELYREARFSEHPLTEAHRQEALAALDDIHRTIGRS CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH FGVHA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA