| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715711
Identifier: 119715711
GI number: 119715711
Start: 1562112
End: 1563173
Strand: Direct
Name: 119715711
Synonym: Noca_1475
Alternate gene names: NA
Gene position: 1562112-1563173 (Clockwise)
Preceding gene: 119715710
Following gene: 119715712
Centisome position: 31.33
GC content: 71.28
Gene sequence:
>1062_bases ATGCGCCGACTCGGCGGTCGTCAGCGGGCAAGATGCGCCGACTCGACCTACCGGTGCGTAACCCGCGCGGGTGCGGTGTC GTTGGGCTGCCGTCAGGATCCGTGGCCGGCACGCGCCGGCCTGCCCTACCGGGAGGGACCAGCCCCCATGATCACCGCCA CCTCGTGGTCGGCCCGTCGCGCCGTCACCGTGCTCGCACTCCTGTGCAGCGCCGTGCTCGCCGTCGCGCTCATCTCGTCC TCGCCCGCGGACGCCAAGTCCCACAAACCCCACAAGCACCGCACCACCGTCGCCTGGGCGCCGGCCGACACGGCCCAGAT CCACCCGGGCACGATGATGTACACAGACGGTGCCCAGTGCACCGGCAACTTCGTCTTCACCGACGGCGCCGGCAACGTGT ACGTCGGCTACGCCGCACACTGCGCAGGCACCGGTGCGGCCACCGACACCGACGGCTGCCTCTCGAACTCGCTGCCCCTC GGCACCAAGGTCACGTTCAACGAGGGCGGCAGCCTGATCAGCGAGGGCACCCAGGTCGGCTCGGGCACCCTGGTGTACTC GTCCTGGGACACCATGGACAAGCTCGGTACCACCGACGCCAACACCTGCGCCTACAACGACTTCGCCCTGGTGAAGGTCG CCGCCGGCGACGTCGCCAAGGTGAACCCGTCCGTCCCGTTCTGGGGCGGCCCGGTCGGGATCGACACCGACGGCACCGCT GCGGGCGACCGGCTCTACACCTACGGCAACTCCAGCCTGCGGGCCGGCCTCGAGCCGCTCTCGCCGCACACCGGCATCAG CCTGGGCGACGACCCGGCCGACGGCGGCTGGAGCCACCCGCTGTACACGGTGACCCCCGGCATCCCCGGCGACTCGGGCT CCGGCTTCCTCAGCGCGGACGGCTCGGCCGTCGGAGTCCTGTCCACCCTGGGCCTGGCCCCGCTGCCGGCATCGAACAAC ATCGGGGACCTCGCCCACGAGCTGGCCTTCGCGCAGCAGCACTCCGGCATCTCGGGCCTGCAGCTGGTCAACGGCACCGA GCCCTTCTCGCCGATCCTCTGA
Upstream 100 bases:
>100_bases CACGATGCGCCGACTGGGCGGTGGTGAGCCGGCAAGACGCGCCAGCTCGGCCGGGGTGAGCGGGCAAGATGCGCCGACTG GGCGGTGGTGAGCGGGCAAG
Downstream 100 bases:
>100_bases TCCGCTGAGCACCGGTTCAGCCGCTACCTGAGGGAGCGTCCCGGAGGCTCGGCACTTGCCTCCGCCTGCTCGACGACGAC GGCCCCGCCCGACCCGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MRRLGGRQRARCADSTYRCVTRAGAVSLGCRQDPWPARAGLPYREGPAPMITATSWSARRAVTVLALLCSAVLAVALISS SPADAKSHKPHKHRTTVAWAPADTAQIHPGTMMYTDGAQCTGNFVFTDGAGNVYVGYAAHCAGTGAATDTDGCLSNSLPL GTKVTFNEGGSLISEGTQVGSGTLVYSSWDTMDKLGTTDANTCAYNDFALVKVAAGDVAKVNPSVPFWGGPVGIDTDGTA AGDRLYTYGNSSLRAGLEPLSPHTGISLGDDPADGGWSHPLYTVTPGIPGDSGSGFLSADGSAVGVLSTLGLAPLPASNN IGDLAHELAFAQQHSGISGLQLVNGTEPFSPIL
Sequences:
>Translated_353_residues MRRLGGRQRARCADSTYRCVTRAGAVSLGCRQDPWPARAGLPYREGPAPMITATSWSARRAVTVLALLCSAVLAVALISS SPADAKSHKPHKHRTTVAWAPADTAQIHPGTMMYTDGAQCTGNFVFTDGAGNVYVGYAAHCAGTGAATDTDGCLSNSLPL GTKVTFNEGGSLISEGTQVGSGTLVYSSWDTMDKLGTTDANTCAYNDFALVKVAAGDVAKVNPSVPFWGGPVGIDTDGTA AGDRLYTYGNSSLRAGLEPLSPHTGISLGDDPADGGWSHPLYTVTPGIPGDSGSGFLSADGSAVGVLSTLGLAPLPASNN IGDLAHELAFAQQHSGISGLQLVNGTEPFSPIL >Mature_353_residues MRRLGGRQRARCADSTYRCVTRAGAVSLGCRQDPWPARAGLPYREGPAPMITATSWSARRAVTVLALLCSAVLAVALISS SPADAKSHKPHKHRTTVAWAPADTAQIHPGTMMYTDGAQCTGNFVFTDGAGNVYVGYAAHCAGTGAATDTDGCLSNSLPL GTKVTFNEGGSLISEGTQVGSGTLVYSSWDTMDKLGTTDANTCAYNDFALVKVAAGDVAKVNPSVPFWGGPVGIDTDGTA AGDRLYTYGNSSLRAGLEPLSPHTGISLGDDPADGGWSHPLYTVTPGIPGDSGSGFLSADGSAVGVLSTLGLAPLPASNN IGDLAHELAFAQQHSGISGLQLVNGTEPFSPIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36169; Mature: 36169
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLGGRQRARCADSTYRCVTRAGAVSLGCRQDPWPARAGLPYREGPAPMITATSWSARR CCCCCCCCHHHHHCHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHH AVTVLALLCSAVLAVALISSSPADAKSHKPHKHRTTVAWAPADTAQIHPGTMMYTDGAQC HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCEECCCEEEEECCCCE TGNFVFTDGAGNVYVGYAAHCAGTGAATDTDGCLSNSLPLGTKVTFNEGGSLISEGTQVG ECCEEEECCCCCEEEEEEEEECCCCCCCCCCCHHCCCCCCCEEEEECCCCCCHHCCCCCC SGTLVYSSWDTMDKLGTTDANTCAYNDFALVKVAAGDVAKVNPSVPFWGGPVGIDTDGTA CCEEEEECCCCHHHHCCCCCCCEEECCEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCC AGDRLYTYGNSSLRAGLEPLSPHTGISLGDDPADGGWSHPLYTVTPGIPGDSGSGFLSAD CCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECC GSAVGVLSTLGLAPLPASNNIGDLAHELAFAQQHSGISGLQLVNGTEPFSPIL CCEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure MRRLGGRQRARCADSTYRCVTRAGAVSLGCRQDPWPARAGLPYREGPAPMITATSWSARR CCCCCCCCHHHHHCHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHH AVTVLALLCSAVLAVALISSSPADAKSHKPHKHRTTVAWAPADTAQIHPGTMMYTDGAQC HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCEECCCEEEEECCCCE TGNFVFTDGAGNVYVGYAAHCAGTGAATDTDGCLSNSLPLGTKVTFNEGGSLISEGTQVG ECCEEEECCCCCEEEEEEEEECCCCCCCCCCCHHCCCCCCCEEEEECCCCCCHHCCCCCC SGTLVYSSWDTMDKLGTTDANTCAYNDFALVKVAAGDVAKVNPSVPFWGGPVGIDTDGTA CCEEEEECCCCHHHHCCCCCCCEEECCEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCC AGDRLYTYGNSSLRAGLEPLSPHTGISLGDDPADGGWSHPLYTVTPGIPGDSGSGFLSAD CCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECC GSAVGVLSTLGLAPLPASNNIGDLAHELAFAQQHSGISGLQLVNGTEPFSPIL CCEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA