BacMap

Definition	Nocardioides sp. JS614 chromosome, complete genome.
Accession	NC_008699
Length	4,985,871

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The map label for this gene is cshA [H]

Identifier: 119715705

GI number: 119715705

Start: 1556692

End: 1558131

Strand: Reverse

Name: cshA [H]

Synonym: Noca_1469

Alternate gene names: 119715705

Gene position: 1558131-1556692 (Counterclockwise)

Preceding gene: 119715707

Following gene: 119715702

Centisome position: 31.25

GC content: 72.15

Gene sequence:

>1440_bases
GTGCTCCCCGAGATTTGCGATGCGCTCGAGCGCGTCAACATCGTCACCCCCTTCGCGATCCAGGAGATGACCCTCTCCGT
CGCCCTGATGGGCACCGACCTGATCGGGCAGGCCCGCACCGGCACCGGCAAGACCCTGGCGTTCGGCATCCCGGTGCTCC
AGCGCAGCGTCGCGCCGAAGGACCCCGACTACGCCGAGCTGCCGCAGGGCAAGCCCCAGGCACTGATCGTCGCGCCGACC
CGGGAGCTCGCGCTCCAGGTCTCGGGCGACCTCGCGCTCGCCGGCGCGGACCGCGGCCTGCGGGTCCTCACCGTGTACGG
CGGCGTCGGCTACGAGCCCCAGCTCGACGCGCTCCAGGAGGGCGTCGACATCGTCGTCGGCACCCCGGGCCGGCTCATCG
ACCTGGCCAACCGGCGCGCGCTGGACATCTCCCACGTGCACGCCCTGGTGCTCGACGAGGCCGACGAGATGCTGGACCTG
GGCTTCCTGCCGGATGTCGAGCGGATCCTGGCGATGACGCCCGAGACCCGCCAGACGATGCTGTTCTCGGCCACGATGCC
GGCGGCGATCGTCGCGCTGGCCCGCACCCACATGCGGCACCCGATGAACATCCGGGCGGAGTCGTCGTACGAGAACGCCA
CCGTGCCCGCGACCGCCCAGTTCATCTACCAGGCTCACGATCTGGACAAGCCCGAGATCATCGGCCGCGTGCTGCAGGCC
GAGGACGCCGGCAAGGTCATCGTGTTCACCCGCACCAAGCGCCAGGCGCAGCGGGTCGCCGACGACCTGGCCGAGCGCGG
CTTCAGCGCCAGCCCGCTGCACGGCGACATGGCGCAGGTCGCGCGCGAGAAGGCGCTGACCAAGTTCCGTGAGGACAAGC
TGCGGGTGCTGGTCGCGACCGACGTCGCGGCGCGCGGCATCGACGTCGCGGGCGTCTCCCACGTCATCAACTACAGCTGT
CCCGAGGACGACAAGACCTACGTGCACCGGATCGGCCGCACCGGCCGGGCGGGCGCGTCGGGCATCGCGATCACCTTCGT
GGACTGGGCCGACCTGGCGCGCTGGAAGATGATCAACAAGGCGCTCGACCTGCCCTTCGACGAGCCGCAGGAGACGTACT
CGACCTCCGAGCACCTCTACCACGACCAGGGCATCGCGCCCGGCACCAAGGGCCGGATCGTCGACCCCGCCCCCGTCGAG
CGCAAGCCGCGGGAGGACCGTGGCGGCGAGCGTCGCGAGCGCTCCGGGAACCGCAACCGAAGCCGCAGTCGGACCCGCAC
CCGGTCGGGTGAGACCGTCACCGCTGGCACGCCGGCGGCCACGTCAGCGGCGGCCGAGGCCGAGGGCGGGGAGGCCCGCT
CGAACGGCTCCCGCAACCGGTCCCGCTCGCGCAACCGCCGCCGCTCGAGCGGCACCAAGCCCGCCCCCGCCGCGGAGTAG

Upstream 100 bases:

>100_bases
GACCCGCATTCCGAGTCCGCCGCATCCGACATCTCATTCGGTTGATCCCGGCTGACTCACGAAAGCGACAAAGACCCTGA
CCACGTTCCGAGAGCTCGGG

Downstream 100 bases:

>100_bases
CTCGCGCCTCCCGGGTCGTGTGCCTGAGAACGCGCCATGGCGCGTTCTCAGGCACACGACCCTGCCTCGGACGGCGCCGG
TCAGGCGGTGACGACGACGG

Product: DEAD/DEAH box helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MLPEICDALERVNIVTPFAIQEMTLSVALMGTDLIGQARTGTGKTLAFGIPVLQRSVAPKDPDYAELPQGKPQALIVAPT
RELALQVSGDLALAGADRGLRVLTVYGGVGYEPQLDALQEGVDIVVGTPGRLIDLANRRALDISHVHALVLDEADEMLDL
GFLPDVERILAMTPETRQTMLFSATMPAAIVALARTHMRHPMNIRAESSYENATVPATAQFIYQAHDLDKPEIIGRVLQA
EDAGKVIVFTRTKRQAQRVADDLAERGFSASPLHGDMAQVAREKALTKFREDKLRVLVATDVAARGIDVAGVSHVINYSC
PEDDKTYVHRIGRTGRAGASGIAITFVDWADLARWKMINKALDLPFDEPQETYSTSEHLYHDQGIAPGTKGRIVDPAPVE
RKPREDRGGERRERSGNRNRSRSRTRTRSGETVTAGTPAATSAAAEAEGGEARSNGSRNRSRSRNRRRSSGTKPAPAAE

Sequences:

>Translated_479_residues
MLPEICDALERVNIVTPFAIQEMTLSVALMGTDLIGQARTGTGKTLAFGIPVLQRSVAPKDPDYAELPQGKPQALIVAPT
RELALQVSGDLALAGADRGLRVLTVYGGVGYEPQLDALQEGVDIVVGTPGRLIDLANRRALDISHVHALVLDEADEMLDL
GFLPDVERILAMTPETRQTMLFSATMPAAIVALARTHMRHPMNIRAESSYENATVPATAQFIYQAHDLDKPEIIGRVLQA
EDAGKVIVFTRTKRQAQRVADDLAERGFSASPLHGDMAQVAREKALTKFREDKLRVLVATDVAARGIDVAGVSHVINYSC
PEDDKTYVHRIGRTGRAGASGIAITFVDWADLARWKMINKALDLPFDEPQETYSTSEHLYHDQGIAPGTKGRIVDPAPVE
RKPREDRGGERRERSGNRNRSRSRTRTRSGETVTAGTPAATSAAAEAEGGEARSNGSRNRSRSRNRRRSSGTKPAPAAE
>Mature_479_residues
MLPEICDALERVNIVTPFAIQEMTLSVALMGTDLIGQARTGTGKTLAFGIPVLQRSVAPKDPDYAELPQGKPQALIVAPT
RELALQVSGDLALAGADRGLRVLTVYGGVGYEPQLDALQEGVDIVVGTPGRLIDLANRRALDISHVHALVLDEADEMLDL
GFLPDVERILAMTPETRQTMLFSATMPAAIVALARTHMRHPMNIRAESSYENATVPATAQFIYQAHDLDKPEIIGRVLQA
EDAGKVIVFTRTKRQAQRVADDLAERGFSASPLHGDMAQVAREKALTKFREDKLRVLVATDVAARGIDVAGVSHVINYSC
PEDDKTYVHRIGRTGRAGASGIAITFVDWADLARWKMINKALDLPFDEPQETYSTSEHLYHDQGIAPGTKGRIVDPAPVE
RKPREDRGGERRERSGNRNRSRSRTRTRSGETVTAGTPAATSAAAEAEGGEARSNGSRNRSRSRNRRRSSGTKPAPAAE

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI222352149, Length=356, Percent_Identity=39.8876404494382, Blast_Score=250, Evalue=3e-66,
Organism=Homo sapiens, GI41327771, Length=387, Percent_Identity=36.9509043927649, Blast_Score=235, Evalue=6e-62,
Organism=Homo sapiens, GI13129006, Length=339, Percent_Identity=41.0029498525074, Blast_Score=235, Evalue=6e-62,
Organism=Homo sapiens, GI50659095, Length=349, Percent_Identity=39.2550143266476, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI20149629, Length=355, Percent_Identity=37.1830985915493, Blast_Score=229, Evalue=3e-60,
Organism=Homo sapiens, GI169881239, Length=405, Percent_Identity=36.0493827160494, Blast_Score=228, Evalue=6e-60,
Organism=Homo sapiens, GI13514809, Length=405, Percent_Identity=36.0493827160494, Blast_Score=228, Evalue=6e-60,
Organism=Homo sapiens, GI45446747, Length=346, Percent_Identity=39.0173410404624, Blast_Score=228, Evalue=8e-60,
Organism=Homo sapiens, GI45446743, Length=346, Percent_Identity=39.0173410404624, Blast_Score=228, Evalue=8e-60,
Organism=Homo sapiens, GI41327773, Length=366, Percent_Identity=38.2513661202186, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI4758138, Length=346, Percent_Identity=37.5722543352601, Blast_Score=225, Evalue=8e-59,
Organism=Homo sapiens, GI301171467, Length=407, Percent_Identity=35.8722358722359, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI87196351, Length=398, Percent_Identity=36.1809045226131, Blast_Score=219, Evalue=5e-57,
Organism=Homo sapiens, GI301171475, Length=398, Percent_Identity=36.1809045226131, Blast_Score=218, Evalue=8e-57,
Organism=Homo sapiens, GI224593278, Length=371, Percent_Identity=36.1185983827493, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI13518015, Length=340, Percent_Identity=36.7647058823529, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI216548263, Length=340, Percent_Identity=36.7647058823529, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI262231852, Length=340, Percent_Identity=36.7647058823529, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI262118318, Length=340, Percent_Identity=36.7647058823529, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI148613856, Length=362, Percent_Identity=36.1878453038674, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI38201710, Length=362, Percent_Identity=36.1878453038674, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI55749865, Length=346, Percent_Identity=34.6820809248555, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI21071032, Length=377, Percent_Identity=36.8700265251989, Blast_Score=213, Evalue=4e-55,
Organism=Homo sapiens, GI7661920, Length=353, Percent_Identity=35.1274787535411, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI164664518, Length=347, Percent_Identity=32.5648414985591, Blast_Score=208, Evalue=1e-53,
Organism=Homo sapiens, GI4758112, Length=364, Percent_Identity=32.1428571428571, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI18375623, Length=364, Percent_Identity=32.1428571428571, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI21040371, Length=364, Percent_Identity=32.1428571428571, Blast_Score=197, Evalue=3e-50,
Organism=Homo sapiens, GI83700235, Length=333, Percent_Identity=37.5375375375375, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI51094101, Length=335, Percent_Identity=35.2238805970149, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI164419743, Length=335, Percent_Identity=35.2238805970149, Blast_Score=193, Evalue=4e-49,
Organism=Homo sapiens, GI4503529, Length=333, Percent_Identity=36.9369369369369, Blast_Score=191, Evalue=9e-49,
Organism=Homo sapiens, GI188035877, Length=353, Percent_Identity=34.2776203966006, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI41327776, Length=355, Percent_Identity=32.9577464788732, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI31542656, Length=376, Percent_Identity=33.2446808510638, Blast_Score=186, Evalue=6e-47,
Organism=Homo sapiens, GI13514831, Length=332, Percent_Identity=33.7349397590361, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI38327634, Length=336, Percent_Identity=31.8452380952381, Blast_Score=165, Evalue=9e-41,
Organism=Homo sapiens, GI256223453, Length=343, Percent_Identity=31.4868804664723, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI164419732, Length=351, Percent_Identity=33.3333333333333, Blast_Score=159, Evalue=4e-39,
Organism=Homo sapiens, GI41327779, Length=362, Percent_Identity=32.0441988950276, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI8922886, Length=371, Percent_Identity=32.8840970350404, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI38569505, Length=355, Percent_Identity=31.2676056338028, Blast_Score=157, Evalue=3e-38,
Organism=Homo sapiens, GI38569503, Length=354, Percent_Identity=31.3559322033898, Blast_Score=155, Evalue=6e-38,
Organism=Homo sapiens, GI6005743, Length=371, Percent_Identity=32.3450134770889, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI62241022, Length=357, Percent_Identity=33.3333333333333, Blast_Score=154, Evalue=3e-37,
Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=33.033033033033, Blast_Score=153, Evalue=3e-37,
Organism=Homo sapiens, GI62241024, Length=339, Percent_Identity=33.3333333333333, Blast_Score=152, Evalue=1e-36,
Organism=Homo sapiens, GI17505907, Length=390, Percent_Identity=29.2307692307692, Blast_Score=139, Evalue=6e-33,
Organism=Homo sapiens, GI256773275, Length=373, Percent_Identity=30.2949061662198, Blast_Score=133, Evalue=5e-31,
Organism=Homo sapiens, GI9506931, Length=379, Percent_Identity=28.4960422163588, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI9966805, Length=332, Percent_Identity=29.2168674698795, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI154759257, Length=387, Percent_Identity=28.4237726098191, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI20336298, Length=196, Percent_Identity=35.2040816326531, Blast_Score=99, Evalue=8e-21,
Organism=Escherichia coli, GI87082221, Length=365, Percent_Identity=44.1095890410959, Blast_Score=285, Evalue=6e-78,
Organism=Escherichia coli, GI1787016, Length=345, Percent_Identity=40.2898550724638, Blast_Score=252, Evalue=4e-68,
Organism=Escherichia coli, GI1790214, Length=346, Percent_Identity=39.3063583815029, Blast_Score=237, Evalue=1e-63,
Organism=Escherichia coli, GI1787605, Length=360, Percent_Identity=39.7222222222222, Blast_Score=231, Evalue=6e-62,
Organism=Escherichia coli, GI1788930, Length=347, Percent_Identity=40.3458213256484, Blast_Score=222, Evalue=5e-59,
Organism=Escherichia coli, GI48994977, Length=120, Percent_Identity=29.1666666666667, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17555296, Length=368, Percent_Identity=38.8586956521739, Blast_Score=235, Evalue=5e-62,
Organism=Caenorhabditis elegans, GI71987143, Length=357, Percent_Identity=36.6946778711485, Blast_Score=232, Evalue=3e-61,
Organism=Caenorhabditis elegans, GI32565321, Length=384, Percent_Identity=35.9375, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI86570094, Length=356, Percent_Identity=38.7640449438202, Blast_Score=224, Evalue=8e-59,
Organism=Caenorhabditis elegans, GI17510307, Length=362, Percent_Identity=36.7403314917127, Blast_Score=218, Evalue=5e-57,
Organism=Caenorhabditis elegans, GI17510309, Length=362, Percent_Identity=36.7403314917127, Blast_Score=218, Evalue=6e-57,
Organism=Caenorhabditis elegans, GI71995514, Length=362, Percent_Identity=36.7403314917127, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI17537549, Length=357, Percent_Identity=36.4145658263305, Blast_Score=215, Evalue=5e-56,
Organism=Caenorhabditis elegans, GI115533224, Length=350, Percent_Identity=36, Blast_Score=215, Evalue=5e-56,
Organism=Caenorhabditis elegans, GI17552642, Length=351, Percent_Identity=38.1766381766382, Blast_Score=211, Evalue=6e-55,
Organism=Caenorhabditis elegans, GI17552114, Length=346, Percent_Identity=32.9479768786127, Blast_Score=210, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17507945, Length=348, Percent_Identity=36.7816091954023, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI71995724, Length=354, Percent_Identity=36.1581920903955, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17507121, Length=354, Percent_Identity=36.1581920903955, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI71995718, Length=345, Percent_Identity=34.4927536231884, Blast_Score=197, Evalue=9e-51,
Organism=Caenorhabditis elegans, GI17510559, Length=359, Percent_Identity=34.5403899721448, Blast_Score=195, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI71982858, Length=381, Percent_Identity=31.496062992126, Blast_Score=194, Evalue=9e-50,
Organism=Caenorhabditis elegans, GI71999644, Length=344, Percent_Identity=34.593023255814, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI71999646, Length=344, Percent_Identity=34.593023255814, Blast_Score=193, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI115532548, Length=379, Percent_Identity=33.7730870712401, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17507881, Length=359, Percent_Identity=33.7047353760446, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17509811, Length=351, Percent_Identity=35.8974358974359, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI115532546, Length=379, Percent_Identity=33.509234828496, Blast_Score=188, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI17507879, Length=344, Percent_Identity=33.4302325581395, Blast_Score=178, Evalue=7e-45,
Organism=Caenorhabditis elegans, GI193208216, Length=377, Percent_Identity=31.2997347480106, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17507877, Length=344, Percent_Identity=33.1395348837209, Blast_Score=175, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI193206561, Length=333, Percent_Identity=31.8318318318318, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17536103, Length=386, Percent_Identity=33.6787564766839, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17536099, Length=384, Percent_Identity=33.0729166666667, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI17536101, Length=384, Percent_Identity=33.0729166666667, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=31.3471502590674, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17505370, Length=373, Percent_Identity=29.2225201072386, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI71990816, Length=370, Percent_Identity=31.6216216216216, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI32564046, Length=369, Percent_Identity=31.4363143631436, Blast_Score=152, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI17553716, Length=358, Percent_Identity=28.7709497206704, Blast_Score=135, Evalue=6e-32,
Organism=Caenorhabditis elegans, GI17556951, Length=372, Percent_Identity=27.4193548387097, Blast_Score=131, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI25148291, Length=336, Percent_Identity=30.6547619047619, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI25148203, Length=388, Percent_Identity=26.0309278350515, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17508543, Length=413, Percent_Identity=26.1501210653753, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71997889, Length=355, Percent_Identity=27.887323943662, Blast_Score=111, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71982862, Length=200, Percent_Identity=33.5, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI71987152, Length=110, Percent_Identity=44.5454545454545, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI32564293, Length=107, Percent_Identity=36.4485981308411, Blast_Score=72, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6325138, Length=357, Percent_Identity=38.9355742296919, Blast_Score=238, Evalue=2e-63,
Organism=Saccharomyces cerevisiae, GI6321856, Length=362, Percent_Identity=38.6740331491713, Blast_Score=233, Evalue=4e-62,
Organism=Saccharomyces cerevisiae, GI6324778, Length=357, Percent_Identity=39.4957983193277, Blast_Score=233, Evalue=5e-62,
Organism=Saccharomyces cerevisiae, GI6324217, Length=339, Percent_Identity=38.9380530973451, Blast_Score=233, Evalue=7e-62,
Organism=Saccharomyces cerevisiae, GI6320041, Length=346, Percent_Identity=36.1271676300578, Blast_Score=229, Evalue=1e-60,
Organism=Saccharomyces cerevisiae, GI6321360, Length=336, Percent_Identity=37.202380952381, Blast_Score=215, Evalue=1e-56,
Organism=Saccharomyces cerevisiae, GI6320224, Length=358, Percent_Identity=35.195530726257, Blast_Score=211, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6320449, Length=354, Percent_Identity=37.5706214689266, Blast_Score=207, Evalue=2e-54,
Organism=Saccharomyces cerevisiae, GI6323021, Length=354, Percent_Identity=34.7457627118644, Blast_Score=203, Evalue=5e-53,
Organism=Saccharomyces cerevisiae, GI6322912, Length=353, Percent_Identity=33.9943342776204, Blast_Score=187, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6322323, Length=353, Percent_Identity=33.9943342776204, Blast_Score=187, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6322427, Length=337, Percent_Identity=35.3115727002967, Blast_Score=186, Evalue=5e-48,
Organism=Saccharomyces cerevisiae, GI6320173, Length=398, Percent_Identity=29.3969849246231, Blast_Score=181, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6323947, Length=366, Percent_Identity=32.2404371584699, Blast_Score=177, Evalue=3e-45,
Organism=Saccharomyces cerevisiae, GI6324620, Length=356, Percent_Identity=33.9887640449438, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6320119, Length=353, Percent_Identity=31.4447592067989, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6321963, Length=384, Percent_Identity=30.7291666666667, Blast_Score=170, Evalue=5e-43,
Organism=Saccharomyces cerevisiae, GI6319714, Length=377, Percent_Identity=31.2997347480106, Blast_Score=168, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6321111, Length=376, Percent_Identity=32.1808510638298, Blast_Score=159, Evalue=9e-40,
Organism=Saccharomyces cerevisiae, GI6319618, Length=405, Percent_Identity=27.9012345679012, Blast_Score=159, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6320400, Length=410, Percent_Identity=30, Blast_Score=152, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6321267, Length=345, Percent_Identity=33.3333333333333, Blast_Score=144, Evalue=2e-35,
Organism=Saccharomyces cerevisiae, GI6323306, Length=402, Percent_Identity=25.3731343283582, Blast_Score=118, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6324366, Length=356, Percent_Identity=24.7191011235955, Blast_Score=104, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6321374, Length=393, Percent_Identity=23.6641221374046, Blast_Score=92, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6322876, Length=203, Percent_Identity=27.5862068965517, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24584994, Length=376, Percent_Identity=39.6276595744681, Blast_Score=244, Evalue=1e-64,
Organism=Drosophila melanogaster, GI21355075, Length=357, Percent_Identity=37.2549019607843, Blast_Score=239, Evalue=4e-63,
Organism=Drosophila melanogaster, GI24584399, Length=347, Percent_Identity=38.328530259366, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24662330, Length=346, Percent_Identity=37.5722543352601, Blast_Score=222, Evalue=5e-58,
Organism=Drosophila melanogaster, GI24585582, Length=441, Percent_Identity=32.6530612244898, Blast_Score=221, Evalue=7e-58,
Organism=Drosophila melanogaster, GI24642151, Length=346, Percent_Identity=37.8612716763006, Blast_Score=218, Evalue=5e-57,
Organism=Drosophila melanogaster, GI28574962, Length=364, Percent_Identity=36.2637362637363, Blast_Score=218, Evalue=6e-57,
Organism=Drosophila melanogaster, GI24644479, Length=353, Percent_Identity=35.6940509915014, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24644483, Length=353, Percent_Identity=35.6940509915014, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI24644487, Length=353, Percent_Identity=35.6940509915014, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI45551833, Length=353, Percent_Identity=35.6940509915014, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI24644485, Length=353, Percent_Identity=35.6940509915014, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI281361218, Length=353, Percent_Identity=35.6940509915014, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI24644481, Length=353, Percent_Identity=35.6940509915014, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI18857967, Length=364, Percent_Identity=35.7142857142857, Blast_Score=215, Evalue=4e-56,
Organism=Drosophila melanogaster, GI24583281, Length=348, Percent_Identity=34.1954022988506, Blast_Score=212, Evalue=6e-55,
Organism=Drosophila melanogaster, GI24583279, Length=348, Percent_Identity=34.1954022988506, Blast_Score=211, Evalue=7e-55,
Organism=Drosophila melanogaster, GI17977678, Length=359, Percent_Identity=37.6044568245125, Blast_Score=208, Evalue=6e-54,
Organism=Drosophila melanogaster, GI17985987, Length=398, Percent_Identity=35.678391959799, Blast_Score=207, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24645031, Length=353, Percent_Identity=34.5609065155807, Blast_Score=206, Evalue=4e-53,
Organism=Drosophila melanogaster, GI21356161, Length=340, Percent_Identity=37.6470588235294, Blast_Score=204, Evalue=9e-53,
Organism=Drosophila melanogaster, GI24582080, Length=334, Percent_Identity=37.125748502994, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24582078, Length=334, Percent_Identity=37.125748502994, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI17136248, Length=334, Percent_Identity=37.125748502994, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24582075, Length=334, Percent_Identity=37.125748502994, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI28575014, Length=368, Percent_Identity=31.7934782608696, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI17647335, Length=354, Percent_Identity=35.0282485875706, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI17136814, Length=353, Percent_Identity=34.8441926345609, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI24581954, Length=364, Percent_Identity=31.3186813186813, Blast_Score=180, Evalue=2e-45,
Organism=Drosophila melanogaster, GI24581952, Length=364, Percent_Identity=31.3186813186813, Blast_Score=180, Evalue=2e-45,
Organism=Drosophila melanogaster, GI24581956, Length=364, Percent_Identity=31.3186813186813, Blast_Score=180, Evalue=2e-45,
Organism=Drosophila melanogaster, GI28571808, Length=357, Percent_Identity=31.0924369747899, Blast_Score=175, Evalue=5e-44,
Organism=Drosophila melanogaster, GI28571809, Length=357, Percent_Identity=31.0924369747899, Blast_Score=175, Evalue=5e-44,
Organism=Drosophila melanogaster, GI20130173, Length=450, Percent_Identity=30.8888888888889, Blast_Score=175, Evalue=5e-44,
Organism=Drosophila melanogaster, GI281365720, Length=307, Percent_Identity=34.5276872964169, Blast_Score=174, Evalue=1e-43,
Organism=Drosophila melanogaster, GI21355559, Length=378, Percent_Identity=35.4497354497354, Blast_Score=160, Evalue=2e-39,
Organism=Drosophila melanogaster, GI24642822, Length=353, Percent_Identity=31.728045325779, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI24666101, Length=365, Percent_Identity=32.3287671232877, Blast_Score=159, Evalue=5e-39,
Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=30.0613496932515, Blast_Score=142, Evalue=3e-34,
Organism=Drosophila melanogaster, GI24643725, Length=376, Percent_Identity=27.9255319148936, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI28571338, Length=417, Percent_Identity=26.6187050359712, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI18859659, Length=417, Percent_Identity=26.6187050359712, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI17136666, Length=431, Percent_Identity=27.8422273781903, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI19920478, Length=315, Percent_Identity=28.8888888888889, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24640164, Length=358, Percent_Identity=23.1843575418994, Blast_Score=95, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 52030; Mature: 52030

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPEICDALERVNIVTPFAIQEMTLSVALMGTDLIGQARTGTGKTLAFGIPVLQRSVAPK
CCHHHHHHHHHCCCCCCHHHHHHHEEEEEECCHHHCCCCCCCCCEEEECCHHHHHCCCCC
DPDYAELPQGKPQALIVAPTRELALQVSGDLALAGADRGLRVLTVYGGVGYEPQLDALQE
CCCHHHCCCCCCCEEEEECHHHEEEEECCCEEEEECCCCEEEEEEECCCCCCCCHHHHHC
GVDIVVGTPGRLIDLANRRALDISHVHALVLDEADEMLDLGFLPDVERILAMTPETRQTM
CCEEEEECCCCEEECCCCCEEEHHHHHHHHHHCHHHHHHCCCCCCHHHHHHCCCCHHHEE
LFSATMPAAIVALARTHMRHPMNIRAESSYENATVPATAQFIYQAHDLDKPEIIGRVLQA
EEECHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHC
EDAGKVIVFTRTKRQAQRVADDLAERGFSASPLHGDMAQVAREKALTKFREDKLRVLVAT
CCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEE
DVAARGIDVAGVSHVINYSCPEDDKTYVHRIGRTGRAGASGIAITFVDWADLARWKMINK
CHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHH
ALDLPFDEPQETYSTSEHLYHDQGIAPGTKGRIVDPAPVERKPREDRGGERRERSGNRNR
HHCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCH
SRSRTRTRSGETVTAGTPAATSAAAEAEGGEARSNGSRNRSRSRNRRRSSGTKPAPAAE
HHHHHHCCCCCEEECCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLPEICDALERVNIVTPFAIQEMTLSVALMGTDLIGQARTGTGKTLAFGIPVLQRSVAPK
CCHHHHHHHHHCCCCCCHHHHHHHEEEEEECCHHHCCCCCCCCCEEEECCHHHHHCCCCC
DPDYAELPQGKPQALIVAPTRELALQVSGDLALAGADRGLRVLTVYGGVGYEPQLDALQE
CCCHHHCCCCCCCEEEEECHHHEEEEECCCEEEEECCCCEEEEEEECCCCCCCCHHHHHC
GVDIVVGTPGRLIDLANRRALDISHVHALVLDEADEMLDLGFLPDVERILAMTPETRQTM
CCEEEEECCCCEEECCCCCEEEHHHHHHHHHHCHHHHHHCCCCCCHHHHHHCCCCHHHEE
LFSATMPAAIVALARTHMRHPMNIRAESSYENATVPATAQFIYQAHDLDKPEIIGRVLQA
EEECHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHC
EDAGKVIVFTRTKRQAQRVADDLAERGFSASPLHGDMAQVAREKALTKFREDKLRVLVAT
CCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEE
DVAARGIDVAGVSHVINYSCPEDDKTYVHRIGRTGRAGASGIAITFVDWADLARWKMINK
CHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHH
ALDLPFDEPQETYSTSEHLYHDQGIAPGTKGRIVDPAPVERKPREDRGGERRERSGNRNR
HHCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCH
SRSRTRTRSGETVTAGTPAATSAAAEAEGGEARSNGSRNRSRSRNRRRSSGTKPAPAAE
HHHHHHCCCCCEEECCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA