| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715690
Identifier: 119715690
GI number: 119715690
Start: 1541260
End: 1542681
Strand: Direct
Name: 119715690
Synonym: Noca_1454
Alternate gene names: NA
Gene position: 1541260-1542681 (Clockwise)
Preceding gene: 119715689
Following gene: 119715691
Centisome position: 30.91
GC content: 68.07
Gene sequence:
>1422_bases ATGCGAGGTGCAAGGGGTGTGGTTGTGAGGTCGAAGATCCTGGCGCTGGTGGGCGCGGCGGCGCTGGGTGCCTCGCTGCT GGCCGCCTCACCGCTCGCCGGCCCGGCCCAGGCGCACGTCGACGACTCCGCTGTCGTCAGCGCCGGCAGCGCTCGCACGG GCACCGCGCCGGCACGCGCCGAGGGCACCAAGAACCCCTGGATGCCGGCTACCGGCGGCTGGTTCAACGACCCCTGGGGC CTCCAGGAGGCCAAGTTCCGCATCGAGCGGCAGATCGTCGCCGCGATCAACCACGCCCGCAAGGGCTCCTACATCCGGAT CGCGGTCTACTCCTTCGACCGGGTCAACGTCGCCCGGGCCCTGCTCGACGCCCACAAGCGCGGCGTCCGGGTGCAGGTCC TGCACAACGACCACCAGTACACGACCGCGATGAAGATGCTCAAGCACGGTCTGGGCACCAACCGCGGCAAGAAGAGTTGG GACTACACCTGCAAGACCGGGTGTCGCAGCGTCCAGGGCGTGGCGCACGACAAGATCTACCTCTTCGAGCACACCGGCGG CGCCAAGAACGTCGTGATGACCGGCTCGGCCAACCTCACCGGGAACGCCGCGATCCACCAGTTCAACGACCTGCTGGTCA AGAACGACGTCCCGAACCTCTACGCCCGGCTGCTGAAGCTCTTCTGGGAGCTGAAGAAGGACAAGACCGCCAACCCGCTC TACCAGGTCGACGAGCTGCGCGACTACAAGCTCTGGGTGATGCCGCGGCCGCGCAACACCCGCGATCGCGACCCCGTCAT CGACATCCTGCGTCCGGTCCAGTGCACGGGCGCCGGGGGCGGCACCGGTACGAACGGGCGGACCAAGATCCGCGTCTCCA TGCACGCCTGGAACGGCGCACGCGGCAGCTGGATCGCCGAGCGGCTGCGCAACCTGTACGCGCAGGGCTGCGACGTGAAG GTGCTGTGGGCGCTGGGTGGGACCGAGATGAAGCGGGTGATCGGCATGAACACCCCGCGCGGCACCGTCCCGAGGCACAC GGACAGCTACAACACCGACTGCGACGAGCTGCAGGAGGTGGACATGTACAGCCACCAGAAGTACCTGACGATCTCCGGCC ACTACGGGGACGACGCCTCCACCTCCTACGTGTTCACCGGCTCCAGCAACTGGACGCCGTCGGGCATCAGCGGCGACGAG ATGATCCTGCGGGTCAAGGGCCCGCACCTGGTCAACCAGTGGAACCGGAACTTCGACTTCATCTGGAACCACCGCTCGCG GCCGGTCGGCAACAGCCCGGGCCCGGCCTTCTACCCGACCCCACCGGAGTGCGAGCCGACCACGACAACGACCACGCCGA GAGCGCGGCGGGCAACGAGCACCGACCTGCAGTTCTCCGGCCGCTACTGGGAGGGCGACTGA
Upstream 100 bases:
>100_bases GGCGCGACGGGGCGCCGCAAGCGTCGTTCGGCGAGGACCGCACCCAGCACCTGACCGGTTGCGTGCTCGACGCTGTCCTG GCGCGTCGGTGATCTCGGTG
Downstream 100 bases:
>100_bases TCGCGTGGCCGAGCGGCTGGTCCTGCATGTCGGGACGATGAAGTCCGGGACGACGTTCCTGCAGAACGTCGTCGCCAACA ACCGTGAGGCGCTGCGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MRGARGVVVRSKILALVGAAALGASLLAASPLAGPAQAHVDDSAVVSAGSARTGTAPARAEGTKNPWMPATGGWFNDPWG LQEAKFRIERQIVAAINHARKGSYIRIAVYSFDRVNVARALLDAHKRGVRVQVLHNDHQYTTAMKMLKHGLGTNRGKKSW DYTCKTGCRSVQGVAHDKIYLFEHTGGAKNVVMTGSANLTGNAAIHQFNDLLVKNDVPNLYARLLKLFWELKKDKTANPL YQVDELRDYKLWVMPRPRNTRDRDPVIDILRPVQCTGAGGGTGTNGRTKIRVSMHAWNGARGSWIAERLRNLYAQGCDVK VLWALGGTEMKRVIGMNTPRGTVPRHTDSYNTDCDELQEVDMYSHQKYLTISGHYGDDASTSYVFTGSSNWTPSGISGDE MILRVKGPHLVNQWNRNFDFIWNHRSRPVGNSPGPAFYPTPPECEPTTTTTTPRARRATSTDLQFSGRYWEGD
Sequences:
>Translated_473_residues MRGARGVVVRSKILALVGAAALGASLLAASPLAGPAQAHVDDSAVVSAGSARTGTAPARAEGTKNPWMPATGGWFNDPWG LQEAKFRIERQIVAAINHARKGSYIRIAVYSFDRVNVARALLDAHKRGVRVQVLHNDHQYTTAMKMLKHGLGTNRGKKSW DYTCKTGCRSVQGVAHDKIYLFEHTGGAKNVVMTGSANLTGNAAIHQFNDLLVKNDVPNLYARLLKLFWELKKDKTANPL YQVDELRDYKLWVMPRPRNTRDRDPVIDILRPVQCTGAGGGTGTNGRTKIRVSMHAWNGARGSWIAERLRNLYAQGCDVK VLWALGGTEMKRVIGMNTPRGTVPRHTDSYNTDCDELQEVDMYSHQKYLTISGHYGDDASTSYVFTGSSNWTPSGISGDE MILRVKGPHLVNQWNRNFDFIWNHRSRPVGNSPGPAFYPTPPECEPTTTTTTPRARRATSTDLQFSGRYWEGD >Mature_473_residues MRGARGVVVRSKILALVGAAALGASLLAASPLAGPAQAHVDDSAVVSAGSARTGTAPARAEGTKNPWMPATGGWFNDPWG LQEAKFRIERQIVAAINHARKGSYIRIAVYSFDRVNVARALLDAHKRGVRVQVLHNDHQYTTAMKMLKHGLGTNRGKKSW DYTCKTGCRSVQGVAHDKIYLFEHTGGAKNVVMTGSANLTGNAAIHQFNDLLVKNDVPNLYARLLKLFWELKKDKTANPL YQVDELRDYKLWVMPRPRNTRDRDPVIDILRPVQCTGAGGGTGTNGRTKIRVSMHAWNGARGSWIAERLRNLYAQGCDVK VLWALGGTEMKRVIGMNTPRGTVPRHTDSYNTDCDELQEVDMYSHQKYLTISGHYGDDASTSYVFTGSSNWTPSGISGDE MILRVKGPHLVNQWNRNFDFIWNHRSRPVGNSPGPAFYPTPPECEPTTTTTTPRARRATSTDLQFSGRYWEGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52304; Mature: 52304
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGARGVVVRSKILALVGAAALGASLLAASPLAGPAQAHVDDSAVVSAGSARTGTAPARA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEECCCCCCCCCCCCC EGTKNPWMPATGGWFNDPWGLQEAKFRIERQIVAAINHARKGSYIRIAVYSFDRVNVARA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHH LLDAHKRGVRVQVLHNDHQYTTAMKMLKHGLGTNRGKKSWDYTCKTGCRSVQGVAHDKIY HHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE LFEHTGGAKNVVMTGSANLTGNAAIHQFNDLLVKNDVPNLYARLLKLFWELKKDKTANPL EEEECCCCCEEEEECCCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCC YQVDELRDYKLWVMPRPRNTRDRDPVIDILRPVQCTGAGGGTGTNGRTKIRVSMHAWNGA HHHHCCCCEEEEEEECCCCCCCCCCHHHHHCCCEEECCCCCCCCCCEEEEEEEEEECCCC RGSWIAERLRNLYAQGCDVKVLWALGGTEMKRVIGMNTPRGTVPRHTDSYNTDCDELQEV CHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH DMYSHQKYLTISGHYGDDASTSYVFTGSSNWTPSGISGDEMILRVKGPHLVNQWNRNFDF HHHCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCE IWNHRSRPVGNSPGPAFYPTPPECEPTTTTTTPRARRATSTDLQFSGRYWEGD EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEECCC >Mature Secondary Structure MRGARGVVVRSKILALVGAAALGASLLAASPLAGPAQAHVDDSAVVSAGSARTGTAPARA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEECCCCCCCCCCCCC EGTKNPWMPATGGWFNDPWGLQEAKFRIERQIVAAINHARKGSYIRIAVYSFDRVNVARA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHH LLDAHKRGVRVQVLHNDHQYTTAMKMLKHGLGTNRGKKSWDYTCKTGCRSVQGVAHDKIY HHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE LFEHTGGAKNVVMTGSANLTGNAAIHQFNDLLVKNDVPNLYARLLKLFWELKKDKTANPL EEEECCCCCEEEEECCCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCC YQVDELRDYKLWVMPRPRNTRDRDPVIDILRPVQCTGAGGGTGTNGRTKIRVSMHAWNGA HHHHCCCCEEEEEEECCCCCCCCCCHHHHHCCCEEECCCCCCCCCCEEEEEEEEEECCCC RGSWIAERLRNLYAQGCDVKVLWALGGTEMKRVIGMNTPRGTVPRHTDSYNTDCDELQEV CHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH DMYSHQKYLTISGHYGDDASTSYVFTGSSNWTPSGISGDEMILRVKGPHLVNQWNRNFDF HHHCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCE IWNHRSRPVGNSPGPAFYPTPPECEPTTTTTTPRARRATSTDLQFSGRYWEGD EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA