| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715691
Identifier: 119715691
GI number: 119715691
Start: 1542686
End: 1543717
Strand: Direct
Name: 119715691
Synonym: Noca_1455
Alternate gene names: NA
Gene position: 1542686-1543717 (Clockwise)
Preceding gene: 119715690
Following gene: 119715692
Centisome position: 30.94
GC content: 71.51
Gene sequence:
>1032_bases GTGGCCGAGCGGCTGGTCCTGCATGTCGGGACGATGAAGTCCGGGACGACGTTCCTGCAGAACGTCGTCGCCAACAACCG TGAGGCGCTGCGCGAGCAGGGCGTGAGCTTCCTGGGCCGCAAGTGGCGCGAGCAGATCAAGGCCGCCCAGGACGCGATCG AGCGCGGCGGCAAGGGCCAGCCGGAGCTCTCGCCGGACGGACCCTGGGCCCGGACCGTCCGCGAGGTCGAGGCCTGGCCG GGCACGGCCCTGTTCTCCGTGGAGTTCTTCGGTGCCCGCAAGCCCAGCAAGATCGAGCAGATCGTCGGCTCGCTCGGCAC GACGCCGGTGACCGTGGTGCTCACGGTGCGCGACCTGGCCCGCACCATCCCGAGCATGTGGCAGGAGTCGGTCCAGAACG GCGGGCGAGCGACCTGGGCCGACTACCTGGTCGCGGTCCGCGAGGAGCGCAAGGACTCCGCCCTCGCGAACTCCTTCTGG CGCCAGCAGGGCGTGGCGGCGATGGCGCGTCGCTGGGCGGCGGTCGTCGGCACCGAGAACGTCGTGCTGGTGACCGCTCC CCCCAAGGGCGCGCCCAGCAACCTGCTGTGGGACCGGTACGCCGGCGTCCTCGGCGTCGCCCCGGAGTCGTGCAGCCTGG ACGTCCCGGCCAACCCGTCCCTCGGACTGGCCTCCACGCTGGTCCTGCGCCGGCTCAATGAGGAGCTCGCCGCCGCACCG CTCTCGCGAGGTGCGTACCACCAGAAGGTGAAGCGGGTGCTGGCGAAGAACGGCATGGCCCGGCATCGCCGGGAGGAGCC GGTGCTCGGGCTCGACGAGCCCTGGGTCTACCAGCGCTCGGAGCGGGAGATCGCCGCGCTGCGCAAGCTCGGCTGCCCGG TGGTCGGTGACCTCGCGGAGCTCACCTCCCACCCCGTCCCCGGCGTGCAGCCCGAGACCGTGTCCGTCGAGCAGGAGCTC GAGGCGGCCGTGCGTGGCCTTTCTCACGCGGTGCGTGATCTCACATGGGCCAAGACTGGGAAGAAGAAGTAG
Upstream 100 bases:
>100_bases GAGTGCGAGCCGACCACGACAACGACCACGCCGAGAGCGCGGCGGGCAACGAGCACCGACCTGCAGTTCTCCGGCCGCTA CTGGGAGGGCGACTGATCGC
Downstream 100 bases:
>100_bases GTTACCCGCGAATTCGTCCCGCTGCCGGGACGCCGCCGACCGAGAGGACGCCCATGGGCCGCCTGTGTGAGACCGAGGGA CTGACCGAGGACCAGACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MAERLVLHVGTMKSGTTFLQNVVANNREALREQGVSFLGRKWREQIKAAQDAIERGGKGQPELSPDGPWARTVREVEAWP GTALFSVEFFGARKPSKIEQIVGSLGTTPVTVVLTVRDLARTIPSMWQESVQNGGRATWADYLVAVREERKDSALANSFW RQQGVAAMARRWAAVVGTENVVLVTAPPKGAPSNLLWDRYAGVLGVAPESCSLDVPANPSLGLASTLVLRRLNEELAAAP LSRGAYHQKVKRVLAKNGMARHRREEPVLGLDEPWVYQRSEREIAALRKLGCPVVGDLAELTSHPVPGVQPETVSVEQEL EAAVRGLSHAVRDLTWAKTGKKK
Sequences:
>Translated_343_residues MAERLVLHVGTMKSGTTFLQNVVANNREALREQGVSFLGRKWREQIKAAQDAIERGGKGQPELSPDGPWARTVREVEAWP GTALFSVEFFGARKPSKIEQIVGSLGTTPVTVVLTVRDLARTIPSMWQESVQNGGRATWADYLVAVREERKDSALANSFW RQQGVAAMARRWAAVVGTENVVLVTAPPKGAPSNLLWDRYAGVLGVAPESCSLDVPANPSLGLASTLVLRRLNEELAAAP LSRGAYHQKVKRVLAKNGMARHRREEPVLGLDEPWVYQRSEREIAALRKLGCPVVGDLAELTSHPVPGVQPETVSVEQEL EAAVRGLSHAVRDLTWAKTGKKK >Mature_342_residues AERLVLHVGTMKSGTTFLQNVVANNREALREQGVSFLGRKWREQIKAAQDAIERGGKGQPELSPDGPWARTVREVEAWPG TALFSVEFFGARKPSKIEQIVGSLGTTPVTVVLTVRDLARTIPSMWQESVQNGGRATWADYLVAVREERKDSALANSFWR QQGVAAMARRWAAVVGTENVVLVTAPPKGAPSNLLWDRYAGVLGVAPESCSLDVPANPSLGLASTLVLRRLNEELAAAPL SRGAYHQKVKRVLAKNGMARHRREEPVLGLDEPWVYQRSEREIAALRKLGCPVVGDLAELTSHPVPGVQPETVSVEQELE AAVRGLSHAVRDLTWAKTGKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37510; Mature: 37379
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERLVLHVGTMKSGTTFLQNVVANNREALREQGVSFLGRKWREQIKAAQDAIERGGKGQ CCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PELSPDGPWARTVREVEAWPGTALFSVEFFGARKPSKIEQIVGSLGTTPVTVVLTVRDLA CCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEHHHHH RTIPSMWQESVQNGGRATWADYLVAVREERKDSALANSFWRQQGVAAMARRWAAVVGTEN HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VVLVTAPPKGAPSNLLWDRYAGVLGVAPESCSLDVPANPSLGLASTLVLRRLNEELAAAP EEEEECCCCCCCCCHHHHHHCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC LSRGAYHQKVKRVLAKNGMARHRREEPVLGLDEPWVYQRSEREIAALRKLGCPVVGDLAE HHCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHH LTSHPVPGVQPETVSVEQELEAAVRGLSHAVRDLTWAKTGKKK HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AERLVLHVGTMKSGTTFLQNVVANNREALREQGVSFLGRKWREQIKAAQDAIERGGKGQ CCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PELSPDGPWARTVREVEAWPGTALFSVEFFGARKPSKIEQIVGSLGTTPVTVVLTVRDLA CCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEHHHHH RTIPSMWQESVQNGGRATWADYLVAVREERKDSALANSFWRQQGVAAMARRWAAVVGTEN HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VVLVTAPPKGAPSNLLWDRYAGVLGVAPESCSLDVPANPSLGLASTLVLRRLNEELAAAP EEEEECCCCCCCCCHHHHHHCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC LSRGAYHQKVKRVLAKNGMARHRREEPVLGLDEPWVYQRSEREIAALRKLGCPVVGDLAE HHCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHH LTSHPVPGVQPETVSVEQELEAAVRGLSHAVRDLTWAKTGKKK HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA