| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is yedI [H]
Identifier: 119715667
GI number: 119715667
Start: 1515287
End: 1516231
Strand: Direct
Name: yedI [H]
Synonym: Noca_1431
Alternate gene names: 119715667
Gene position: 1515287-1516231 (Clockwise)
Preceding gene: 119715666
Following gene: 119715668
Centisome position: 30.39
GC content: 71.85
Gene sequence:
>945_bases ATGGCTGGAGGCTTGTTCGCGCTGCTCGACGACGTCGCCGCGCTCGCGCGGCTGGCCGCCGCCTCGGTCGACGACGTCGG CGCGGCCGCCGGCCGGGCGACCACCAAGGCCGCGGGCGTGGTCGTCGACGACACCGCGGTCACCCCGCAGTACGTCCACG GCGTCACCGCCGACCGCGAGCTGCCGATGATCCGACGGATCGCGATCGGCTCGATCCGGAACAAGCTGCTGCTGATCCTG CCGGTCGCGCTCGTGCTCAGCCAGTTCCTGCCGTGGCTGCTCACCCCGATCCTGATGCTCGGCGGCGGCTACCTCTGCTT CGAGGGCGCCGAGAAGGTCTGGGGCCGGGTCCGCGGCCACGACGGGCACGCGGTGCCGGTGACCGAGGTCGGCGCCGACG CCGAGAAGACGATGGTGAGCGGCGCGATCCGTACCGACCTGATCCTCTCGGCCGAGATCATGGTGATCGCGCTCAACGAG GTCGCCGACGAGCCGTTCCTCAGCCGCCTGGTGATCCTCGTGGTCGTCGCGATCGTCATCACCGTCGCGGTGTACGGCGT CGTCGGGGTGATCGTGAAGATCGACGACGTCGGCCTGCGCCTCGCCCAGCGGTCCTCCGCCCTCGCGCGTCGGGTGGGGC ACGGGCTCGTCGGGTTCATGCCGCGTCTGCTCGCGGCGATCTCGGTGGTCGGCACCGCCGCGATGCTCTGGGTCGGCGGC CACATCGAGCTCGTCGGCCTCGATGATCTCGGCTGGCACGCGCCGTACGACGCGGTCCACCACCTGGAGGAGAAGGTCCA CCACGCGGTCCCGGGCGCCGGTGCGGCGCTCGGCTGGCTGGTGAACACCGTCCTCTCCGCCGTCCTCGGTCTCCTGGTCG GCGCCGTGGTCGTGCTCCTCGCACACCTGTTGCCCTCCGGCAAGAAGCCCGCCGCCGCCCACTGA
Upstream 100 bases:
>100_bases CGACACCGGCGACCCGCTCGCGGAGGACTCCGCCTGCGTGTACCAGCCCGCCCTGGCCTGACGACGGGATCCTCACGGCC CGCCCGATAGCCTGCTGACC
Downstream 100 bases:
>100_bases CGCTCGGTCGGGACTTCTGGCGGTCGAGTCGGGACTTCCTTGCCCTCGGGGTGACCGAGACTCCCGACCCGACCAGTCGG CGGGGTCGCGGGTGGGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MAGGLFALLDDVAALARLAAASVDDVGAAAGRATTKAAGVVVDDTAVTPQYVHGVTADRELPMIRRIAIGSIRNKLLLIL PVALVLSQFLPWLLTPILMLGGGYLCFEGAEKVWGRVRGHDGHAVPVTEVGADAEKTMVSGAIRTDLILSAEIMVIALNE VADEPFLSRLVILVVVAIVITVAVYGVVGVIVKIDDVGLRLAQRSSALARRVGHGLVGFMPRLLAAISVVGTAAMLWVGG HIELVGLDDLGWHAPYDAVHHLEEKVHHAVPGAGAALGWLVNTVLSAVLGLLVGAVVVLLAHLLPSGKKPAAAH
Sequences:
>Translated_314_residues MAGGLFALLDDVAALARLAAASVDDVGAAAGRATTKAAGVVVDDTAVTPQYVHGVTADRELPMIRRIAIGSIRNKLLLIL PVALVLSQFLPWLLTPILMLGGGYLCFEGAEKVWGRVRGHDGHAVPVTEVGADAEKTMVSGAIRTDLILSAEIMVIALNE VADEPFLSRLVILVVVAIVITVAVYGVVGVIVKIDDVGLRLAQRSSALARRVGHGLVGFMPRLLAAISVVGTAAMLWVGG HIELVGLDDLGWHAPYDAVHHLEEKVHHAVPGAGAALGWLVNTVLSAVLGLLVGAVVVLLAHLLPSGKKPAAAH >Mature_313_residues AGGLFALLDDVAALARLAAASVDDVGAAAGRATTKAAGVVVDDTAVTPQYVHGVTADRELPMIRRIAIGSIRNKLLLILP VALVLSQFLPWLLTPILMLGGGYLCFEGAEKVWGRVRGHDGHAVPVTEVGADAEKTMVSGAIRTDLILSAEIMVIALNEV ADEPFLSRLVILVVVAIVITVAVYGVVGVIVKIDDVGLRLAQRSSALARRVGHGLVGFMPRLLAAISVVGTAAMLWVGGH IELVGLDDLGWHAPYDAVHHLEEKVHHAVPGAGAALGWLVNTVLSAVLGLLVGAVVVLLAHLLPSGKKPAAAH
Specific function: Unknown
COG id: COG2354
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788268, Length=305, Percent_Identity=42.6229508196721, Blast_Score=208, Evalue=4e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008526 [H]
Pfam domain/function: PF05661 DUF808 [H]
EC number: NA
Molecular weight: Translated: 32597; Mature: 32466
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGLFALLDDVAALARLAAASVDDVGAAAGRATTKAAGVVVDDTAVTPQYVHGVTADRE CCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHCCEEEECCCCCHHHHHCCCCCCC LPMIRRIAIGSIRNKLLLILPVALVLSQFLPWLLTPILMLGGGYLCFEGAEKVWGRVRGH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCC DGHAVPVTEVGADAEKTMVSGAIRTDLILSAEIMVIALNEVADEPFLSRLVILVVVAIVI CCCCCCHHHCCCCHHHHHHHHHHHHHHHEEHHHHEEEHHHHCCCHHHHHHHHHHHHHHHH TVAVYGVVGVIVKIDDVGLRLAQRSSALARRVGHGLVGFMPRLLAAISVVGTAAMLWVGG HHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECC HIELVGLDDLGWHAPYDAVHHLEEKVHHAVPGAGAALGWLVNTVLSAVLGLLVGAVVVLL EEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AHLLPSGKKPAAAH HHHCCCCCCCCCCC >Mature Secondary Structure AGGLFALLDDVAALARLAAASVDDVGAAAGRATTKAAGVVVDDTAVTPQYVHGVTADRE CCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHCCEEEECCCCCHHHHHCCCCCCC LPMIRRIAIGSIRNKLLLILPVALVLSQFLPWLLTPILMLGGGYLCFEGAEKVWGRVRGH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCC DGHAVPVTEVGADAEKTMVSGAIRTDLILSAEIMVIALNEVADEPFLSRLVILVVVAIVI CCCCCCHHHCCCCHHHHHHHHHHHHHHHEEHHHHEEEHHHHCCCHHHHHHHHHHHHHHHH TVAVYGVVGVIVKIDDVGLRLAQRSSALARRVGHGLVGFMPRLLAAISVVGTAAMLWVGG HHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECC HIELVGLDDLGWHAPYDAVHHLEEKVHHAVPGAGAALGWLVNTVLSAVLGLLVGAVVVLL EEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AHLLPSGKKPAAAH HHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 2527357; 7567469 [H]