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The map label for this gene is pqqE [H]

Identifier: 119715666

GI number: 119715666

Start: 1514078

End: 1515247

Strand: Direct

Name: pqqE [H]

Synonym: Noca_1430

Alternate gene names: 119715666

Gene position: 1514078-1515247 (Clockwise)

Preceding gene: 119715665

Following gene: 119715667

Centisome position: 30.37

GC content: 73.42

Gene sequence:

>1170_bases
ATGACCCACCCGGCGACACCCCCGACCGGCCGCCACCCCGGCAGCCACCCGGCCGGCCTGGAGCTGCCCCGCACCATCGA
CTACTCCCAGCGTCCGATGCTGGTGTTCTGGGAGGTCACCCGCGCCTGCCAGCTGGCCTGCCGCCACTGCCGCGCCTCGG
CGGCCCCCGACCCGCTGCCCGGTGAGCTGACCGGCGCCGAGGGCCGGGCACTGATCGACCAGGTCGCCGGGTTCGGCCGG
CCGTACCCGATCCTGATCCTCACCGGCGGCGACTGCCTGCTCCGGCCGGACGTCTTCGAGATGGTGGCCCACGCCAACGG
ACTCGGTGTCCCGGTCGCCATGTCCCCCTCGGTGACCCCGAGGCTCACGCCCGAGGCGATCGACCAGATGGTGGCCGCCG
GCGTGAAGGCGGTCTCGCTCAGCCTGGACGGCGCCACCCCCGCGACCCACGACGGCGTGCGCGGCATCCCCGGCCACTTC
GACCAGACCATTCCCGCGATCCGGGCGCTGGTCGCCGCCGGGCTGAAGGTGCAGGTCAACACCACCGTGATGCGGGCCAA
CCTCCACGAGCTCGCCGACGTCGCGGCGATCATGGCCGAGACCGGCGTGGCGATCTGGGAGGTGTTCTTCCTGGTGCACG
TCGGTCGCGGAGAGGCCACCGGTGCGATCACGCCGGAGGAGCACGAGCAGGTGTGCCACTTCCTGTTCGACTCCTCGCAC
TACGGCTTCACGATCCGCACGGTCGAGGCGCCGTTCTTCCGACGCGTGGTCGTGCAGCGCAAGGCGGGCGGCCCGGCCCC
GCAGCAGGCGCCGTACCTGCAGCTGCGCGAGCGCCTCGTCGAGCGGCTCGGTCCGCCGGTCGGCCGGTCGACCGCGCACA
CGGTGTCGACACGCGACGGCAAGGGGATCGTGTTCGTGGCCCACGACGGCCAGGTCTACCCGGCGGGGTTCCTGCCGCTG
CCGCTCGGCTCGGTGCGCGACCATCCGCTGGTCGACATCTACCGCGACAACGAGGTGCTGCGCAGCATCAGGGCGGCGGA
GTTCGGCGGTCGGTGCGGGCGGTGCGAGTACGCCGACCTCTGCGGCGGCTCGCGCGCCCGGGCCTACGCCGACACCGGCG
ACCCGCTCGCGGAGGACTCCGCCTGCGTGTACCAGCCCGCCCTGGCCTGA

Upstream 100 bases:

>100_bases
TGGTGACCGGTGCGGCCTACCGCGGCGTCGGCCTGGCCGGCTGCGTCGCCCAGGCCGACGCGACCGCCACGTCCCTGCTC
GCAACGCAAGGAGCGCCCAC

Downstream 100 bases:

>100_bases
CGACGGGATCCTCACGGCCCGCCCGATAGCCTGCTGACCATGGCTGGAGGCTTGTTCGCGCTGCTCGACGACGTCGCCGC
GCTCGCGCGGCTGGCCGCCG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MTHPATPPTGRHPGSHPAGLELPRTIDYSQRPMLVFWEVTRACQLACRHCRASAAPDPLPGELTGAEGRALIDQVAGFGR
PYPILILTGGDCLLRPDVFEMVAHANGLGVPVAMSPSVTPRLTPEAIDQMVAAGVKAVSLSLDGATPATHDGVRGIPGHF
DQTIPAIRALVAAGLKVQVNTTVMRANLHELADVAAIMAETGVAIWEVFFLVHVGRGEATGAITPEEHEQVCHFLFDSSH
YGFTIRTVEAPFFRRVVVQRKAGGPAPQQAPYLQLRERLVERLGPPVGRSTAHTVSTRDGKGIVFVAHDGQVYPAGFLPL
PLGSVRDHPLVDIYRDNEVLRSIRAAEFGGRCGRCEYADLCGGSRARAYADTGDPLAEDSACVYQPALA

Sequences:

>Translated_389_residues
MTHPATPPTGRHPGSHPAGLELPRTIDYSQRPMLVFWEVTRACQLACRHCRASAAPDPLPGELTGAEGRALIDQVAGFGR
PYPILILTGGDCLLRPDVFEMVAHANGLGVPVAMSPSVTPRLTPEAIDQMVAAGVKAVSLSLDGATPATHDGVRGIPGHF
DQTIPAIRALVAAGLKVQVNTTVMRANLHELADVAAIMAETGVAIWEVFFLVHVGRGEATGAITPEEHEQVCHFLFDSSH
YGFTIRTVEAPFFRRVVVQRKAGGPAPQQAPYLQLRERLVERLGPPVGRSTAHTVSTRDGKGIVFVAHDGQVYPAGFLPL
PLGSVRDHPLVDIYRDNEVLRSIRAAEFGGRCGRCEYADLCGGSRARAYADTGDPLAEDSACVYQPALA
>Mature_388_residues
THPATPPTGRHPGSHPAGLELPRTIDYSQRPMLVFWEVTRACQLACRHCRASAAPDPLPGELTGAEGRALIDQVAGFGRP
YPILILTGGDCLLRPDVFEMVAHANGLGVPVAMSPSVTPRLTPEAIDQMVAAGVKAVSLSLDGATPATHDGVRGIPGHFD
QTIPAIRALVAAGLKVQVNTTVMRANLHELADVAAIMAETGVAIWEVFFLVHVGRGEATGAITPEEHEQVCHFLFDSSHY
GFTIRTVEAPFFRRVVVQRKAGGPAPQQAPYLQLRERLVERLGPPVGRSTAHTVSTRDGKGIVFVAHDGQVYPAGFLPLP
LGSVRDHPLVDIYRDNEVLRSIRAAEFGGRCGRCEYADLCGGSRARAYADTGDPLAEDSACVYQPALA

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 41601; Mature: 41470

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHPATPPTGRHPGSHPAGLELPRTIDYSQRPMLVFWEVTRACQLACRHCRASAAPDPLP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCC
GELTGAEGRALIDQVAGFGRPYPILILTGGDCLLRPDVFEMVAHANGLGVPVAMSPSVTP
CCCCCCCCHHHHHHHHHCCCCCEEEEEECCCEEECCHHHHHHHCCCCCCCCEEECCCCCC
RLTPEAIDQMVAAGVKAVSLSLDGATPATHDGVRGIPGHFDQTIPAIRALVAAGLKVQVN
CCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
TTVMRANLHELADVAAIMAETGVAIWEVFFLVHVGRGEATGAITPEEHEQVCHFLFDSSH
HEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCC
YGFTIRTVEAPFFRRVVVQRKAGGPAPQQAPYLQLRERLVERLGPPVGRSTAHTVSTRDG
CCEEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCC
KGIVFVAHDGQVYPAGFLPLPLGSVRDHPLVDIYRDNEVLRSIRAAEFGGRCGRCEYADL
CEEEEEEECCEECCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHH
CGGSRARAYADTGDPLAEDSACVYQPALA
CCCCCCCEECCCCCCCCCCCCEEECCCCC
>Mature Secondary Structure 
THPATPPTGRHPGSHPAGLELPRTIDYSQRPMLVFWEVTRACQLACRHCRASAAPDPLP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCC
GELTGAEGRALIDQVAGFGRPYPILILTGGDCLLRPDVFEMVAHANGLGVPVAMSPSVTP
CCCCCCCCHHHHHHHHHCCCCCEEEEEECCCEEECCHHHHHHHCCCCCCCCEEECCCCCC
RLTPEAIDQMVAAGVKAVSLSLDGATPATHDGVRGIPGHFDQTIPAIRALVAAGLKVQVN
CCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
TTVMRANLHELADVAAIMAETGVAIWEVFFLVHVGRGEATGAITPEEHEQVCHFLFDSSH
HEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCC
YGFTIRTVEAPFFRRVVVQRKAGGPAPQQAPYLQLRERLVERLGPPVGRSTAHTVSTRDG
CCEEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCC
KGIVFVAHDGQVYPAGFLPLPLGSVRDHPLVDIYRDNEVLRSIRAAEFGGRCGRCEYADL
CEEEEEEECCEECCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHH
CGGSRARAYADTGDPLAEDSACVYQPALA
CCCCCCCEECCCCCCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA