| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715663
Identifier: 119715663
GI number: 119715663
Start: 1510350
End: 1511378
Strand: Direct
Name: 119715663
Synonym: Noca_1427
Alternate gene names: NA
Gene position: 1510350-1511378 (Clockwise)
Preceding gene: 119715662
Following gene: 119715664
Centisome position: 30.29
GC content: 76.68
Gene sequence:
>1029_bases ATGGTCAGCTGGTTCGACGAGTCCCGTCTCGACGACGTCGCCACCTTGGAGTCCGACGCCGAGCTGCGCACGCTTGCCGA GTCCGGCGCCCGGGTCCGTCGAGCAGCAGGTGACGTCGCGGCGGCGACCGCGGAGGCGGTCGCCCGGGCCGAGGACCTGG CCCGGCCGCGCGCCGTCATCGCCGCCGGCCCGGACTCCAGGCTGCTCCGGGCGGTCCTCGAGCCCTGGTGCCCGGTGCCG TTCGTGGCCTGGCCGGGCCCGGCGCTGCCGGGCTGGGCCGGCAGCCTGGACCTCGTGGTCGTGCTGGCACCCGACGGGTC CGGCACCGGCACGGCGTCCGCGGTCGCCGAGGCGGTTCGCCGCGGCTGCCAGGTCGTCGTGGCGACGCCTGCGGGCTCCC GGGTCGCGGAGCACGCCGCCGGCCGGTGGAGCACGATCCTGCCGACCGAGACTCGCGACCAGCTCGCGACGGCGGTCGTG GTGCTGGAGTACCTCGAGCGGGTGTCGCTGGGTCCGCGAGCCGACGCCGAGCAGGTGGCCACCGCGCTCGACCAGGTCGC GATCGAGTGCTCGCCGCACCGCGACCTCGCGGTCAACCCCGCCAAGATGCTCGCCATCGCCCTCGCCGACACCAATCCCC TCGTGTGGGGTGGCTCGGTGCTGGCCGCCCGGGCGGCGCGTCGCGTGTCGGAGTCGATCCGCCGCGCGAGCGGGCGCACC GCCCTGGCAGGGGACGCGGAGCACCTGCTCCCCGTGCTCGAGGCGGCCCGACCGCGCGACGTGTTCGACGACCCCTTCGC GGACGGGCCCGGCGACCTGCGCCCGATGCTGCTGGTGCTCGACGACGGCGCCGAGGAGCCGGTGGTGCGGGAGCACCGGG GCCGGCTGCAGGCGGCGGCCGCGGCCCGCGGCATCCGCGTGGAGAGGGTCACCACCGAGGCGCCGACCGAGGTGGCCCGC TACGCATCGCTGCTCCTGAGCGGCCGGTACGCCGCCGAGTACCTCCGGATCGGCCTGGTCGAGGACTGA
Upstream 100 bases:
>100_bases GGAGCTGGTGTGCCGCGGCTGCGGGCTGGCCTACCCGATCCGAGACGACATCCCGGTCCTGCTGGTCGACGAGGCCCGCA AGCCCTGACGGGCCCCCGCG
Downstream 100 bases:
>100_bases GTCCGGCCCCGAGCGGGTATCTCACCAAGGTGCCGACCCAGAACACGCCGACCGCTCGACCGACGGCCCCGCCGCCCGTC CCGGCCGCCCGCGACCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Mannose-6-Phosphate Isomerase; SIS Regulatory Protein; Transcriptional Regulator RpiR Family
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MVSWFDESRLDDVATLESDAELRTLAESGARVRRAAGDVAAATAEAVARAEDLARPRAVIAAGPDSRLLRAVLEPWCPVP FVAWPGPALPGWAGSLDLVVVLAPDGSGTGTASAVAEAVRRGCQVVVATPAGSRVAEHAAGRWSTILPTETRDQLATAVV VLEYLERVSLGPRADAEQVATALDQVAIECSPHRDLAVNPAKMLAIALADTNPLVWGGSVLAARAARRVSESIRRASGRT ALAGDAEHLLPVLEAARPRDVFDDPFADGPGDLRPMLLVLDDGAEEPVVREHRGRLQAAAAARGIRVERVTTEAPTEVAR YASLLLSGRYAAEYLRIGLVED
Sequences:
>Translated_342_residues MVSWFDESRLDDVATLESDAELRTLAESGARVRRAAGDVAAATAEAVARAEDLARPRAVIAAGPDSRLLRAVLEPWCPVP FVAWPGPALPGWAGSLDLVVVLAPDGSGTGTASAVAEAVRRGCQVVVATPAGSRVAEHAAGRWSTILPTETRDQLATAVV VLEYLERVSLGPRADAEQVATALDQVAIECSPHRDLAVNPAKMLAIALADTNPLVWGGSVLAARAARRVSESIRRASGRT ALAGDAEHLLPVLEAARPRDVFDDPFADGPGDLRPMLLVLDDGAEEPVVREHRGRLQAAAAARGIRVERVTTEAPTEVAR YASLLLSGRYAAEYLRIGLVED >Mature_342_residues MVSWFDESRLDDVATLESDAELRTLAESGARVRRAAGDVAAATAEAVARAEDLARPRAVIAAGPDSRLLRAVLEPWCPVP FVAWPGPALPGWAGSLDLVVVLAPDGSGTGTASAVAEAVRRGCQVVVATPAGSRVAEHAAGRWSTILPTETRDQLATAVV VLEYLERVSLGPRADAEQVATALDQVAIECSPHRDLAVNPAKMLAIALADTNPLVWGGSVLAARAARRVSESIRRASGRT ALAGDAEHLLPVLEAARPRDVFDDPFADGPGDLRPMLLVLDDGAEEPVVREHRGRLQAAAAARGIRVERVTTEAPTEVAR YASLLLSGRYAAEYLRIGLVED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36081; Mature: 36081
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSWFDESRLDDVATLESDAELRTLAESGARVRRAAGDVAAATAEAVARAEDLARPRAVI CCCCCCCCCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE AAGPDSRLLRAVLEPWCPVPFVAWPGPALPGWAGSLDLVVVLAPDGSGTGTASAVAEAVR EECCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHH RGCQVVVATPAGSRVAEHAAGRWSTILPTETRDQLATAVVVLEYLERVSLGPRADAEQVA CCCEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH TALDQVAIECSPHRDLAVNPAKMLAIALADTNPLVWGGSVLAARAARRVSESIRRASGRT HHHHHHHEECCCCCCCCCCHHHEEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHCCCC ALAGDAEHLLPVLEAARPRDVFDDPFADGPGDLRPMLLVLDDGAEEPVVREHRGRLQAAA EECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH AARGIRVERVTTEAPTEVARYASLLLSGRYAAEYLRIGLVED HHCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCC >Mature Secondary Structure MVSWFDESRLDDVATLESDAELRTLAESGARVRRAAGDVAAATAEAVARAEDLARPRAVI CCCCCCCCCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE AAGPDSRLLRAVLEPWCPVPFVAWPGPALPGWAGSLDLVVVLAPDGSGTGTASAVAEAVR EECCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHH RGCQVVVATPAGSRVAEHAAGRWSTILPTETRDQLATAVVVLEYLERVSLGPRADAEQVA CCCEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH TALDQVAIECSPHRDLAVNPAKMLAIALADTNPLVWGGSVLAARAARRVSESIRRASGRT HHHHHHHEECCCCCCCCCCHHHEEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHCCCC ALAGDAEHLLPVLEAARPRDVFDDPFADGPGDLRPMLLVLDDGAEEPVVREHRGRLQAAA EECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH AARGIRVERVTTEAPTEVARYASLLLSGRYAAEYLRIGLVED HHCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA