| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is ycaR [C]
Identifier: 119715662
GI number: 119715662
Start: 1510167
End: 1510337
Strand: Direct
Name: ycaR [C]
Synonym: Noca_1426
Alternate gene names: 119715662
Gene position: 1510167-1510337 (Clockwise)
Preceding gene: 119715661
Following gene: 119715663
Centisome position: 30.29
GC content: 69.01
Gene sequence:
>171_bases GTGAACGCCGTGAACATCGATCCCGAGCTGCTGGAGATCATCGTCTGCCCGGCCTGCCGGTCCGAGCTGGACCTGGTCGA GGCGGAGCTGGTGTGCCGCGGCTGCGGGCTGGCCTACCCGATCCGAGACGACATCCCGGTCCTGCTGGTCGACGAGGCCC GCAAGCCCTGA
Upstream 100 bases:
>100_bases CTGAACGCCGAGGGCCGAGACGATGCCACCATGGCCGAGGTGCGCGACCGCGTGCTCGAGCAGATCCGGGCTGACCACCC GAGCCCCGAGGAGGAGTGAC
Downstream 100 bases:
>100_bases CGGGCCCCCGCGATGGTCAGCTGGTTCGACGAGTCCCGTCTCGACGACGTCGCCACCTTGGAGTCCGACGCCGAGCTGCG CACGCTTGCCGAGTCCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 56; Mature: 56
Protein sequence:
>56_residues MNAVNIDPELLEIIVCPACRSELDLVEAELVCRGCGLAYPIRDDIPVLLVDEARKP
Sequences:
>Translated_56_residues MNAVNIDPELLEIIVCPACRSELDLVEAELVCRGCGLAYPIRDDIPVLLVDEARKP >Mature_56_residues MNAVNIDPELLEIIVCPACRSELDLVEAELVCRGCGLAYPIRDDIPVLLVDEARKP
Specific function: Unknown
COG id: COG2835
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6164; Mature: 6164
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 7.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAVNIDPELLEIIVCPACRSELDLVEAELVCRGCGLAYPIRDDIPVLLVDEARKP CCCCCCCHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCC >Mature Secondary Structure MNAVNIDPELLEIIVCPACRSELDLVEAELVCRGCGLAYPIRDDIPVLLVDEARKP CCCCCCCHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA