| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715648
Identifier: 119715648
GI number: 119715648
Start: 1493039
End: 1495894
Strand: Direct
Name: 119715648
Synonym: Noca_1412
Alternate gene names: NA
Gene position: 1493039-1495894 (Clockwise)
Preceding gene: 119715647
Following gene: 119715649
Centisome position: 29.95
GC content: 75.77
Gene sequence:
>2856_bases GTGGGTTCCTCGGTCTCAGCGCTGCTCGTCAGCCACGACGGCGCTCGCTGGCTGCCCTCCGTGATCGAGGGGCTGCAGGC CCAGCGCACGCCGGTCGACGACGTCGTGGTCGTCGACACGACCAGCAGGGACGGCAGCGCCGACCTGCTCCACGACGCGT TCGGGGAGGTCGTCTCGGCGCCGGGCGCCACGTCGTTCCCGGCCGCGGTGGCCCTGGGACTCGACGAGCTGCGCCGCCGC GGCTCCACCAGCGAGTGGGTCTGGATCCTCCACGACGACGCCAACCCCGACCCGGGAGCGCTTGCCGCGCTGCTGGCAGC GGCGGCCGCCGACCCCGGCGTCGACATCCTCGGACCGAAGCTGCGGGAGTGGCCCTCCCTCAAGCGGCTCCTCGAGCTCG GGGTCACCATCTCCGCCACCGGCCGTCGGCAGACCGGCCTCGAGCGCGGTGAGTACGACCAGGGTCAGCACGACGAGATC CGCGAGGTCCTCGCCGTCAACACCGCAGGCATGCTCGTGCGGCGCGCGGTGCTCGAGGGGCTGGGTGGCCTCGACCCGCA GCTGCCGATCTTCGGCAACGACATCGACTTCGGCTGGCGGGCCGCCATGGCCGGGCACCGCACGGTCGTCGTCCCGGACG CCGTGGTGTTCCACGCGGAGGCGGCCCATCGCGGCCTGCGGCGCACGCCGCTGACCGGGCGGCACACGCACTACCAGGAG CGCCGCGCCGCGCTGTACACCCTGCTGGTCAACGCCCGCCGTCGCTCGCTGCTGTGGCTCACGATCCGGCTGGCGTTCGG CACCGTGCTGCGGATGATCGGCTTCCTGCTGGTCCGCGCCGTCGGCGAGGCGCTGGACGACCTGGCCGCGTTGCTGTCGA TCTACACCCATCCCGGCGAGGTGCGTGCGGCGCGGCGGGCCCGCCGCGCCCGCGGGCCCCTCCTGGAGGAGCGCGCCCGT CCGTTGCTCGCGCCGTGGTGGCTGCCCTATCGGCACGGCCTGGACTTCCTCGGCGACCTGGTCACGGCGGCGACCAACCA GGCGCAGGACATCGCCGAGCGGCGTCGGATCCCGGCGGCCCAGCACGCGCCCGCGAGCACCGTCGCCCGACCGCGCACCG AGGAGGACGAGCTCGCCGAGGACACCGGCGCGGTGGCCCGCTTCCTGACCAACCCGGTGGCCCTCGCGCTCGCCATCGTC GTCCTCGCCGCGCTGGTCGGCGGCCGGGAGGCCCTCGGCAGCGTGGCCGGCGGCGGGCTCTCGCCGACACCGGCCGGCGC ATCGGACTGGTGGCGCCTCCACACCGAGACCTGGCACCAGCTCGGCACCGGGACGGCCGTCCCGGCCCCGCCGTACCTGC TCCCCTTGGCGCTGCTGGCCACGCTGCTCGGTGGCAGCGCGTCGGCTGCGGTGTCGGTGGTGCTCGTGCTGGCGGTGCCG GTCGGCCTCTGGGGGGCGTGGCGGTTCCTGCGGGTCGTCGGGCGGCTCGTGACCCCGGCCGGCGCACCGCGCCGGGCGCT GCTGTGGGGCTCGGTCACCTGGGCGCTGGTGCCGGTCGTCAGTGGCGGCTGGGGCGACGGGCGCCTCGGCGTCGTGGTGG TCGCGGCGCTGCTGCCCTGGCTCGCCCACGCGGCTCTCGGCTTCGCGGACCCGGACGCCGACCGCCGCTGGCGGGCGGCC TGGCGGACCGGGCTGCTCCTGGCGGTGAGTGCCGCCTTCGCGCCCGTGCTCTGGCTGTTCGCGGGGCTGCTCGGCCTGGT GGTCCTCGCTGCGGCGTTCGCGATCGTCCGCGGTACGGGCCGCGACCGGTCGGTCTGGGGGCCGCCGGCCACCGCGCTCG GTCTGGTCCCGCTGCTGCTCGCCCCCTGGTGGATCCCGGCCATCCAGCGCGGCGCCGCGGAGGCCCTGGTGCTCGACGTC GGCCGGCTGCCCGGACCGGAGGTGGACGGGCTCGGCCTGCTCAGCGGCCGACTCGGCGACCTCGGCGCTCCGTGGTGGCT GGGCGTCGTGCTCGCGGTCCTGGCCGTGCTCGCGTTGGTGCCGCGGACGACGCGGATCCCCGTGCTGGTGTGCTGGGTGG TCGCCGCGGTCGCGGCGGTCCTGGCCGCGGCGCTCGGTGCCGTGACGGTCTCGATGGCGGCGACCTCCGCCGAGGCCGGC CTCGGTGCGCTGGTCGTGGTGCTCCAGGGGGCGCTCGTGGTTGCTGTCACCACGGGAGCGATCACCGCCGGCCGGGGGGC CGGGGCGTCGTGGCGCCGGGTCGTCGCTGTGGGGCTCGCGCTGGTGGCCGCCGCCGTGCCGGTCGGTGGGCTCGCCTGGT GGCTCGGCGGAGCCGATCCCGCGATCGCCGACGGCATCGAGACCGACATCCCCGTGTACATGGTGCAGAGCTCCGAGAGT GGTGCCTCGCACGGGATCCTCGTGGTCCGCGGCAGCGTCGAGGACGGCCTGACCTTCACCGTGCGCCGCGGCGACGGCGT GACGCTCGGGGAGGACGAGATCCTCGACCTCACCGGTGCCGACACGTCGTTCACCGCCCAGGTTCGTGAGCTCGTCTCCC GGCCGACCCCGGGCGTGATCGACCGGATCGCGCAGAGCGGCATCGAGTACGTCGTTCTGCCCTCGCCCGCCGACGGCGAC GTCGCCGCGGTGCTGGACGCTGCGCCCGGCCTGGTCCAGGCGAGCGCGGAGGACCGCAGCACGCGGGCCTGGCAGGTGGA CCGCCCGCTCGACTCCTCGGCCCTTGAGGGCCCGACCTCGTGGCTGCGGGTGCTCCTCCTCGTCGTCCAGGGAGCGGCGT TGCTCGTGGTCGCCGTGCTCTGCCTGCCCACCACCAACCGGAGGCGGTCGTCGTGA
Upstream 100 bases:
>100_bases CTGACACCGAGGAGACCGCCGAGGTCACCCCTGGGGCCGGCGCCGCGGAGCTGAGCGCCGGCCGAGGGGCCTCACCTACC GGCCGTTAGGGTTCGGGATC
Downstream 100 bases:
>100_bases GCCACAGCGCCCCATCGGCCCCCGGCCGCCGCTCGACCCGGCGCGGCTTCCGCCCCGACGTCACCACGGTGCTCGCCGTC GGGCTACCGGTCCTCTGCGC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase; Glycosyltransferase-Like Protein; Glycosyl Transferase Domain-Containing Protein; Glycosyl Transferase Family 2 Protein; Family 2 Glycosyl Transferase; Regulatory Protein; Glycosyltransferases-Like Protein; Integral Membrane Protein; Group 2 Glycosyl Transferase; Integral Membrane Glycosyl Transferase; Glycosyl Transferase
Number of amino acids: Translated: 951; Mature: 950
Protein sequence:
>951_residues MGSSVSALLVSHDGARWLPSVIEGLQAQRTPVDDVVVVDTTSRDGSADLLHDAFGEVVSAPGATSFPAAVALGLDELRRR GSTSEWVWILHDDANPDPGALAALLAAAAADPGVDILGPKLREWPSLKRLLELGVTISATGRRQTGLERGEYDQGQHDEI REVLAVNTAGMLVRRAVLEGLGGLDPQLPIFGNDIDFGWRAAMAGHRTVVVPDAVVFHAEAAHRGLRRTPLTGRHTHYQE RRAALYTLLVNARRRSLLWLTIRLAFGTVLRMIGFLLVRAVGEALDDLAALLSIYTHPGEVRAARRARRARGPLLEERAR PLLAPWWLPYRHGLDFLGDLVTAATNQAQDIAERRRIPAAQHAPASTVARPRTEEDELAEDTGAVARFLTNPVALALAIV VLAALVGGREALGSVAGGGLSPTPAGASDWWRLHTETWHQLGTGTAVPAPPYLLPLALLATLLGGSASAAVSVVLVLAVP VGLWGAWRFLRVVGRLVTPAGAPRRALLWGSVTWALVPVVSGGWGDGRLGVVVVAALLPWLAHAALGFADPDADRRWRAA WRTGLLLAVSAAFAPVLWLFAGLLGLVVLAAAFAIVRGTGRDRSVWGPPATALGLVPLLLAPWWIPAIQRGAAEALVLDV GRLPGPEVDGLGLLSGRLGDLGAPWWLGVVLAVLAVLALVPRTTRIPVLVCWVVAAVAAVLAAALGAVTVSMAATSAEAG LGALVVVLQGALVVAVTTGAITAGRGAGASWRRVVAVGLALVAAAVPVGGLAWWLGGADPAIADGIETDIPVYMVQSSES GASHGILVVRGSVEDGLTFTVRRGDGVTLGEDEILDLTGADTSFTAQVRELVSRPTPGVIDRIAQSGIEYVVLPSPADGD VAAVLDAAPGLVQASAEDRSTRAWQVDRPLDSSALEGPTSWLRVLLLVVQGAALLVVAVLCLPTTNRRRSS
Sequences:
>Translated_951_residues MGSSVSALLVSHDGARWLPSVIEGLQAQRTPVDDVVVVDTTSRDGSADLLHDAFGEVVSAPGATSFPAAVALGLDELRRR GSTSEWVWILHDDANPDPGALAALLAAAAADPGVDILGPKLREWPSLKRLLELGVTISATGRRQTGLERGEYDQGQHDEI REVLAVNTAGMLVRRAVLEGLGGLDPQLPIFGNDIDFGWRAAMAGHRTVVVPDAVVFHAEAAHRGLRRTPLTGRHTHYQE RRAALYTLLVNARRRSLLWLTIRLAFGTVLRMIGFLLVRAVGEALDDLAALLSIYTHPGEVRAARRARRARGPLLEERAR PLLAPWWLPYRHGLDFLGDLVTAATNQAQDIAERRRIPAAQHAPASTVARPRTEEDELAEDTGAVARFLTNPVALALAIV VLAALVGGREALGSVAGGGLSPTPAGASDWWRLHTETWHQLGTGTAVPAPPYLLPLALLATLLGGSASAAVSVVLVLAVP VGLWGAWRFLRVVGRLVTPAGAPRRALLWGSVTWALVPVVSGGWGDGRLGVVVVAALLPWLAHAALGFADPDADRRWRAA WRTGLLLAVSAAFAPVLWLFAGLLGLVVLAAAFAIVRGTGRDRSVWGPPATALGLVPLLLAPWWIPAIQRGAAEALVLDV GRLPGPEVDGLGLLSGRLGDLGAPWWLGVVLAVLAVLALVPRTTRIPVLVCWVVAAVAAVLAAALGAVTVSMAATSAEAG LGALVVVLQGALVVAVTTGAITAGRGAGASWRRVVAVGLALVAAAVPVGGLAWWLGGADPAIADGIETDIPVYMVQSSES GASHGILVVRGSVEDGLTFTVRRGDGVTLGEDEILDLTGADTSFTAQVRELVSRPTPGVIDRIAQSGIEYVVLPSPADGD VAAVLDAAPGLVQASAEDRSTRAWQVDRPLDSSALEGPTSWLRVLLLVVQGAALLVVAVLCLPTTNRRRSS >Mature_950_residues GSSVSALLVSHDGARWLPSVIEGLQAQRTPVDDVVVVDTTSRDGSADLLHDAFGEVVSAPGATSFPAAVALGLDELRRRG STSEWVWILHDDANPDPGALAALLAAAAADPGVDILGPKLREWPSLKRLLELGVTISATGRRQTGLERGEYDQGQHDEIR EVLAVNTAGMLVRRAVLEGLGGLDPQLPIFGNDIDFGWRAAMAGHRTVVVPDAVVFHAEAAHRGLRRTPLTGRHTHYQER RAALYTLLVNARRRSLLWLTIRLAFGTVLRMIGFLLVRAVGEALDDLAALLSIYTHPGEVRAARRARRARGPLLEERARP LLAPWWLPYRHGLDFLGDLVTAATNQAQDIAERRRIPAAQHAPASTVARPRTEEDELAEDTGAVARFLTNPVALALAIVV LAALVGGREALGSVAGGGLSPTPAGASDWWRLHTETWHQLGTGTAVPAPPYLLPLALLATLLGGSASAAVSVVLVLAVPV GLWGAWRFLRVVGRLVTPAGAPRRALLWGSVTWALVPVVSGGWGDGRLGVVVVAALLPWLAHAALGFADPDADRRWRAAW RTGLLLAVSAAFAPVLWLFAGLLGLVVLAAAFAIVRGTGRDRSVWGPPATALGLVPLLLAPWWIPAIQRGAAEALVLDVG RLPGPEVDGLGLLSGRLGDLGAPWWLGVVLAVLAVLALVPRTTRIPVLVCWVVAAVAAVLAAALGAVTVSMAATSAEAGL GALVVVLQGALVVAVTTGAITAGRGAGASWRRVVAVGLALVAAAVPVGGLAWWLGGADPAIADGIETDIPVYMVQSSESG ASHGILVVRGSVEDGLTFTVRRGDGVTLGEDEILDLTGADTSFTAQVRELVSRPTPGVIDRIAQSGIEYVVLPSPADGDV AAVLDAAPGLVQASAEDRSTRAWQVDRPLDSSALEGPTSWLRVLLLVVQGAALLVVAVLCLPTTNRRRSS
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99503; Mature: 99372
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSSVSALLVSHDGARWLPSVIEGLQAQRTPVDDVVVVDTTSRDGSADLLHDAFGEVVSA CCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCC PGATSFPAAVALGLDELRRRGSTSEWVWILHDDANPDPGALAALLAAAAADPGVDILGPK CCCCCCHHHHHHCHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC LREWPSLKRLLELGVTISATGRRQTGLERGEYDQGQHDEIREVLAVNTAGMLVRRAVLEG HHCCHHHHHHHHHCCEEEECCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LGGLDPQLPIFGNDIDFGWRAAMAGHRTVVVPDAVVFHAEAAHRGLRRTPLTGRHTHYQE CCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCHHEEECHHHHCCCCCCCCCCCCCHHHH RRAALYTLLVNARRRSLLWLTIRLAFGTVLRMIGFLLVRAVGEALDDLAALLSIYTHPGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH VRAARRARRARGPLLEERARPLLAPWWLPYRHGLDFLGDLVTAATNQAQDIAERRRIPAA HHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCC QHAPASTVARPRTEEDELAEDTGAVARFLTNPVALALAIVVLAALVGGREALGSVAGGGL CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC SPTPAGASDWWRLHTETWHQLGTGTAVPAPPYLLPLALLATLLGGSASAAVSVVLVLAVP CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VGLWGAWRFLRVVGRLVTPAGAPRRALLWGSVTWALVPVVSGGWGDGRLGVVVVAALLPW HHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LAHAALGFADPDADRRWRAAWRTGLLLAVSAAFAPVLWLFAGLLGLVVLAAAFAIVRGTG HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RDRSVWGPPATALGLVPLLLAPWWIPAIQRGAAEALVLDVGRLPGPEVDGLGLLSGRLGD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCCCCCCCCCCCCC LGAPWWLGVVLAVLAVLALVPRTTRIPVLVCWVVAAVAAVLAAALGAVTVSMAATSAEAG CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LGALVVVLQGALVVAVTTGAITAGRGAGASWRRVVAVGLALVAAAVPVGGLAWWLGGADP HHHHHHHHCCCEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC AIADGIETDIPVYMVQSSESGASHGILVVRGSVEDGLTFTVRRGDGVTLGEDEILDLTGA HHHCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCEEEECCC DTSFTAQVRELVSRPTPGVIDRIAQSGIEYVVLPSPADGDVAAVLDAAPGLVQASAEDRS CCHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCEECCCCCCC TRAWQVDRPLDSSALEGPTSWLRVLLLVVQGAALLVVAVLCLPTTNRRRSS CCCEECCCCCCCHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GSSVSALLVSHDGARWLPSVIEGLQAQRTPVDDVVVVDTTSRDGSADLLHDAFGEVVSA CCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCC PGATSFPAAVALGLDELRRRGSTSEWVWILHDDANPDPGALAALLAAAAADPGVDILGPK CCCCCCHHHHHHCHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC LREWPSLKRLLELGVTISATGRRQTGLERGEYDQGQHDEIREVLAVNTAGMLVRRAVLEG HHCCHHHHHHHHHCCEEEECCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LGGLDPQLPIFGNDIDFGWRAAMAGHRTVVVPDAVVFHAEAAHRGLRRTPLTGRHTHYQE CCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCHHEEECHHHHCCCCCCCCCCCCCHHHH RRAALYTLLVNARRRSLLWLTIRLAFGTVLRMIGFLLVRAVGEALDDLAALLSIYTHPGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH VRAARRARRARGPLLEERARPLLAPWWLPYRHGLDFLGDLVTAATNQAQDIAERRRIPAA HHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCC QHAPASTVARPRTEEDELAEDTGAVARFLTNPVALALAIVVLAALVGGREALGSVAGGGL CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC SPTPAGASDWWRLHTETWHQLGTGTAVPAPPYLLPLALLATLLGGSASAAVSVVLVLAVP CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VGLWGAWRFLRVVGRLVTPAGAPRRALLWGSVTWALVPVVSGGWGDGRLGVVVVAALLPW HHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LAHAALGFADPDADRRWRAAWRTGLLLAVSAAFAPVLWLFAGLLGLVVLAAAFAIVRGTG HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RDRSVWGPPATALGLVPLLLAPWWIPAIQRGAAEALVLDVGRLPGPEVDGLGLLSGRLGD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCCCCCCCCCCCCC LGAPWWLGVVLAVLAVLALVPRTTRIPVLVCWVVAAVAAVLAAALGAVTVSMAATSAEAG CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LGALVVVLQGALVVAVTTGAITAGRGAGASWRRVVAVGLALVAAAVPVGGLAWWLGGADP HHHHHHHHCCCEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC AIADGIETDIPVYMVQSSESGASHGILVVRGSVEDGLTFTVRRGDGVTLGEDEILDLTGA HHHCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCEEEECCC DTSFTAQVRELVSRPTPGVIDRIAQSGIEYVVLPSPADGDVAAVLDAAPGLVQASAEDRS CCHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCEECCCCCCC TRAWQVDRPLDSSALEGPTSWLRVLLLVVQGAALLVVAVLCLPTTNRRRSS CCCEECCCCCCCHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA