Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119715649

Identifier: 119715649

GI number: 119715649

Start: 1495891

End: 1497318

Strand: Direct

Name: 119715649

Synonym: Noca_1413

Alternate gene names: NA

Gene position: 1495891-1497318 (Clockwise)

Preceding gene: 119715648

Following gene: 119715658

Centisome position: 30.0

GC content: 75.98

Gene sequence:

>1428_bases
GTGAGCCACAGCGCCCCATCGGCCCCCGGCCGCCGCTCGACCCGGCGCGGCTTCCGCCCCGACGTCACCACGGTGCTCGC
CGTCGGGCTACCGGTCCTCTGCGCGCTCGCCCTGCTCCTGGTCCAGGCCCCCGGGGCCCTCGACGCGGACCACCCGCCGA
CCCGGGTCGCGCTCACGCGGGCCACCCTCGTGTGTCCCTCCGCGGTCGAGGATGCCGACGACGTCGCGCTCACCAGCGCC
GCGGACGACGCACAAGGCCAGGTCCAGGTCGGGCTCGGCGACGAGCTGCGGACCGCCGACCTCGCCGCCGGCCGGGTGAC
GACGGTCTCCGGTCTGACCGGCCCGGCCGCGGTGGCCGGCGAGGACGAGACCGCCCCCGGCCTGGTCGCCGGCCGGTTCG
GCGGCAGGGAGCCGACGGCGGTCGCCTGCTCCGCCCCCGCGCCGCACGCGTGGTTCACCGGCGTCGGCGCGGGCGCCGGA
CACACTTCCGTCCTCGAGCTCGCCAACCCCGACTCCGGCACGGCCGTCGCGGACATCACCGTCTACGGACGCGGCGGTGT
CGTCGACGCCCCCCGGCTCCGCGGCGTCTCGGTGCCCGGCGGGACCAGCGTCCGCCTCGACCTGGGGTCGGTGATCCCGC
GTCGTGACGAGCTGGCGATCGAGGTCGTCGCCTCCCGCGGCCGGCTCGGTGCGAGCGTTCTCGACCGGTACGACGAGGTC
GGCGCCGCTGAGCTCACCCAGGACTGGCTGCCAGCCCAGGCCGAACCGGCCACCGACAACCTGCTGATGGGGCTCGCACC
GGGCGGCGGTCGCCGTACCCTCGTCGTCGCCAACGGCACCGACGACGAGGTGCGGGCCGACGTCCGGGTCGTCACGGACG
ACTCGGTGTTCGCACCCAAGGGACTGCACGAGATCCGGATCGCGCCGCAGAGCGTGCAGCGGGTCGCGGTCTCCCACGTG
CTCGGGCCCGCGATCTCCGACGGCGCGACCGGTCTGCTCGTCACGGCGACAGCGCCGGTCACGGCCACCCTGCGGTCCTT
CGTCGAGGGCGACCTCTCGCACGCGGTGGCCGACCAGACCCTGGACGGCCCGGCGACCGTGCTGCTCCCCGAGGGTGGCA
AGGGCGTGGCCAAGACGGTCCAGCTCGCCGGTGCGACCCGCACCGGCGCGGTCACCGTGGTCGCGCGCTCCGCGTCCGGC
CAGGAGCTGGACAGCACCCGCGTGGACATCACCCCCGACCGGGGAGTCACCGTCAAGCTCCCGGCGGACGCCGTCCTCGT
GACGGTCACGCCCGAGCGCACGACCCTTGCCGGTGCCGTGCTGGTGTCGGGGAAGGGCAAGGGCCGGGCTAAGGGCGCGG
CCGTGGTGCCGCTGACGACGCCGGAGCTGAACGGGCTGGTGCCCGACGTGCGTCCCGGGCTGCCCTAG

Upstream 100 bases:

>100_bases
CGACCTCGTGGCTGCGGGTGCTCCTCCTCGTCGTCCAGGGAGCGGCGTTGCTCGTGGTCGCCGTGCTCTGCCTGCCCACC
ACCAACCGGAGGCGGTCGTC

Downstream 100 bases:

>100_bases
GGCGGGTCTCCCAAGTCCATGGCCTGCTGCGCGTCGCCCATCACGCGCTCTCGCTGCGTTGCCGTCGCTCGACAGACAAG
CCCGGTATGCCTTCGCTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MSHSAPSAPGRRSTRRGFRPDVTTVLAVGLPVLCALALLLVQAPGALDADHPPTRVALTRATLVCPSAVEDADDVALTSA
ADDAQGQVQVGLGDELRTADLAAGRVTTVSGLTGPAAVAGEDETAPGLVAGRFGGREPTAVACSAPAPHAWFTGVGAGAG
HTSVLELANPDSGTAVADITVYGRGGVVDAPRLRGVSVPGGTSVRLDLGSVIPRRDELAIEVVASRGRLGASVLDRYDEV
GAAELTQDWLPAQAEPATDNLLMGLAPGGGRRTLVVANGTDDEVRADVRVVTDDSVFAPKGLHEIRIAPQSVQRVAVSHV
LGPAISDGATGLLVTATAPVTATLRSFVEGDLSHAVADQTLDGPATVLLPEGGKGVAKTVQLAGATRTGAVTVVARSASG
QELDSTRVDITPDRGVTVKLPADAVLVTVTPERTTLAGAVLVSGKGKGRAKGAAVVPLTTPELNGLVPDVRPGLP

Sequences:

>Translated_475_residues
MSHSAPSAPGRRSTRRGFRPDVTTVLAVGLPVLCALALLLVQAPGALDADHPPTRVALTRATLVCPSAVEDADDVALTSA
ADDAQGQVQVGLGDELRTADLAAGRVTTVSGLTGPAAVAGEDETAPGLVAGRFGGREPTAVACSAPAPHAWFTGVGAGAG
HTSVLELANPDSGTAVADITVYGRGGVVDAPRLRGVSVPGGTSVRLDLGSVIPRRDELAIEVVASRGRLGASVLDRYDEV
GAAELTQDWLPAQAEPATDNLLMGLAPGGGRRTLVVANGTDDEVRADVRVVTDDSVFAPKGLHEIRIAPQSVQRVAVSHV
LGPAISDGATGLLVTATAPVTATLRSFVEGDLSHAVADQTLDGPATVLLPEGGKGVAKTVQLAGATRTGAVTVVARSASG
QELDSTRVDITPDRGVTVKLPADAVLVTVTPERTTLAGAVLVSGKGKGRAKGAAVVPLTTPELNGLVPDVRPGLP
>Mature_474_residues
SHSAPSAPGRRSTRRGFRPDVTTVLAVGLPVLCALALLLVQAPGALDADHPPTRVALTRATLVCPSAVEDADDVALTSAA
DDAQGQVQVGLGDELRTADLAAGRVTTVSGLTGPAAVAGEDETAPGLVAGRFGGREPTAVACSAPAPHAWFTGVGAGAGH
TSVLELANPDSGTAVADITVYGRGGVVDAPRLRGVSVPGGTSVRLDLGSVIPRRDELAIEVVASRGRLGASVLDRYDEVG
AAELTQDWLPAQAEPATDNLLMGLAPGGGRRTLVVANGTDDEVRADVRVVTDDSVFAPKGLHEIRIAPQSVQRVAVSHVL
GPAISDGATGLLVTATAPVTATLRSFVEGDLSHAVADQTLDGPATVLLPEGGKGVAKTVQLAGATRTGAVTVVARSASGQ
ELDSTRVDITPDRGVTVKLPADAVLVTVTPERTTLAGAVLVSGKGKGRAKGAAVVPLTTPELNGLVPDVRPGLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47818; Mature: 47686

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHSAPSAPGRRSTRRGFRPDVTTVLAVGLPVLCALALLLVQAPGALDADHPPTRVALTR
CCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
ATLVCPSAVEDADDVALTSAADDAQGQVQVGLGDELRTADLAAGRVTTVSGLTGPAAVAG
EEEECCHHHCCCCCEEEECCCCCCCCEEEECCCCCCCHHHHCCCCEEEECCCCCCCEECC
EDETAPGLVAGRFGGREPTAVACSAPAPHAWFTGVGAGAGHTSVLELANPDSGTAVADIT
CCCCCCCEEEECCCCCCCCEEEECCCCCCHHEECCCCCCCCCEEEEECCCCCCCEEEEEE
VYGRGGVVDAPRLRGVSVPGGTSVRLDLGSVIPRRDELAIEVVASRGRLGASVLDRYDEV
EECCCCCCCCCCCCEEECCCCCEEEEEHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHC
GAAELTQDWLPAQAEPATDNLLMGLAPGGGRRTLVVANGTDDEVRADVRVVTDDSVFAPK
CHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEEEECCCEECCC
GLHEIRIAPQSVQRVAVSHVLGPAISDGATGLLVTATAPVTATLRSFVEGDLSHAVADQT
CCCEEEECHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCC
LDGPATVLLPEGGKGVAKTVQLAGATRTGAVTVVARSASGQELDSTRVDITPDRGVTVKL
CCCCEEEEEECCCCCHHHEEEECCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEE
PADAVLVTVTPERTTLAGAVLVSGKGKGRAKGAAVVPLTTPELNGLVPDVRPGLP
CCCEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SHSAPSAPGRRSTRRGFRPDVTTVLAVGLPVLCALALLLVQAPGALDADHPPTRVALTR
CCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
ATLVCPSAVEDADDVALTSAADDAQGQVQVGLGDELRTADLAAGRVTTVSGLTGPAAVAG
EEEECCHHHCCCCCEEEECCCCCCCCEEEECCCCCCCHHHHCCCCEEEECCCCCCCEECC
EDETAPGLVAGRFGGREPTAVACSAPAPHAWFTGVGAGAGHTSVLELANPDSGTAVADIT
CCCCCCCEEEECCCCCCCCEEEECCCCCCHHEECCCCCCCCCEEEEECCCCCCCEEEEEE
VYGRGGVVDAPRLRGVSVPGGTSVRLDLGSVIPRRDELAIEVVASRGRLGASVLDRYDEV
EECCCCCCCCCCCCEEECCCCCEEEEEHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHC
GAAELTQDWLPAQAEPATDNLLMGLAPGGGRRTLVVANGTDDEVRADVRVVTDDSVFAPK
CHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEEEECCCEECCC
GLHEIRIAPQSVQRVAVSHVLGPAISDGATGLLVTATAPVTATLRSFVEGDLSHAVADQT
CCCEEEECHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCC
LDGPATVLLPEGGKGVAKTVQLAGATRTGAVTVVARSASGQELDSTRVDITPDRGVTVKL
CCCCEEEEEECCCCCHHHEEEECCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEE
PADAVLVTVTPERTTLAGAVLVSGKGKGRAKGAAVVPLTTPELNGLVPDVRPGLP
CCCEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA