| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715649
Identifier: 119715649
GI number: 119715649
Start: 1495891
End: 1497318
Strand: Direct
Name: 119715649
Synonym: Noca_1413
Alternate gene names: NA
Gene position: 1495891-1497318 (Clockwise)
Preceding gene: 119715648
Following gene: 119715658
Centisome position: 30.0
GC content: 75.98
Gene sequence:
>1428_bases GTGAGCCACAGCGCCCCATCGGCCCCCGGCCGCCGCTCGACCCGGCGCGGCTTCCGCCCCGACGTCACCACGGTGCTCGC CGTCGGGCTACCGGTCCTCTGCGCGCTCGCCCTGCTCCTGGTCCAGGCCCCCGGGGCCCTCGACGCGGACCACCCGCCGA CCCGGGTCGCGCTCACGCGGGCCACCCTCGTGTGTCCCTCCGCGGTCGAGGATGCCGACGACGTCGCGCTCACCAGCGCC GCGGACGACGCACAAGGCCAGGTCCAGGTCGGGCTCGGCGACGAGCTGCGGACCGCCGACCTCGCCGCCGGCCGGGTGAC GACGGTCTCCGGTCTGACCGGCCCGGCCGCGGTGGCCGGCGAGGACGAGACCGCCCCCGGCCTGGTCGCCGGCCGGTTCG GCGGCAGGGAGCCGACGGCGGTCGCCTGCTCCGCCCCCGCGCCGCACGCGTGGTTCACCGGCGTCGGCGCGGGCGCCGGA CACACTTCCGTCCTCGAGCTCGCCAACCCCGACTCCGGCACGGCCGTCGCGGACATCACCGTCTACGGACGCGGCGGTGT CGTCGACGCCCCCCGGCTCCGCGGCGTCTCGGTGCCCGGCGGGACCAGCGTCCGCCTCGACCTGGGGTCGGTGATCCCGC GTCGTGACGAGCTGGCGATCGAGGTCGTCGCCTCCCGCGGCCGGCTCGGTGCGAGCGTTCTCGACCGGTACGACGAGGTC GGCGCCGCTGAGCTCACCCAGGACTGGCTGCCAGCCCAGGCCGAACCGGCCACCGACAACCTGCTGATGGGGCTCGCACC GGGCGGCGGTCGCCGTACCCTCGTCGTCGCCAACGGCACCGACGACGAGGTGCGGGCCGACGTCCGGGTCGTCACGGACG ACTCGGTGTTCGCACCCAAGGGACTGCACGAGATCCGGATCGCGCCGCAGAGCGTGCAGCGGGTCGCGGTCTCCCACGTG CTCGGGCCCGCGATCTCCGACGGCGCGACCGGTCTGCTCGTCACGGCGACAGCGCCGGTCACGGCCACCCTGCGGTCCTT CGTCGAGGGCGACCTCTCGCACGCGGTGGCCGACCAGACCCTGGACGGCCCGGCGACCGTGCTGCTCCCCGAGGGTGGCA AGGGCGTGGCCAAGACGGTCCAGCTCGCCGGTGCGACCCGCACCGGCGCGGTCACCGTGGTCGCGCGCTCCGCGTCCGGC CAGGAGCTGGACAGCACCCGCGTGGACATCACCCCCGACCGGGGAGTCACCGTCAAGCTCCCGGCGGACGCCGTCCTCGT GACGGTCACGCCCGAGCGCACGACCCTTGCCGGTGCCGTGCTGGTGTCGGGGAAGGGCAAGGGCCGGGCTAAGGGCGCGG CCGTGGTGCCGCTGACGACGCCGGAGCTGAACGGGCTGGTGCCCGACGTGCGTCCCGGGCTGCCCTAG
Upstream 100 bases:
>100_bases CGACCTCGTGGCTGCGGGTGCTCCTCCTCGTCGTCCAGGGAGCGGCGTTGCTCGTGGTCGCCGTGCTCTGCCTGCCCACC ACCAACCGGAGGCGGTCGTC
Downstream 100 bases:
>100_bases GGCGGGTCTCCCAAGTCCATGGCCTGCTGCGCGTCGCCCATCACGCGCTCTCGCTGCGTTGCCGTCGCTCGACAGACAAG CCCGGTATGCCTTCGCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MSHSAPSAPGRRSTRRGFRPDVTTVLAVGLPVLCALALLLVQAPGALDADHPPTRVALTRATLVCPSAVEDADDVALTSA ADDAQGQVQVGLGDELRTADLAAGRVTTVSGLTGPAAVAGEDETAPGLVAGRFGGREPTAVACSAPAPHAWFTGVGAGAG HTSVLELANPDSGTAVADITVYGRGGVVDAPRLRGVSVPGGTSVRLDLGSVIPRRDELAIEVVASRGRLGASVLDRYDEV GAAELTQDWLPAQAEPATDNLLMGLAPGGGRRTLVVANGTDDEVRADVRVVTDDSVFAPKGLHEIRIAPQSVQRVAVSHV LGPAISDGATGLLVTATAPVTATLRSFVEGDLSHAVADQTLDGPATVLLPEGGKGVAKTVQLAGATRTGAVTVVARSASG QELDSTRVDITPDRGVTVKLPADAVLVTVTPERTTLAGAVLVSGKGKGRAKGAAVVPLTTPELNGLVPDVRPGLP
Sequences:
>Translated_475_residues MSHSAPSAPGRRSTRRGFRPDVTTVLAVGLPVLCALALLLVQAPGALDADHPPTRVALTRATLVCPSAVEDADDVALTSA ADDAQGQVQVGLGDELRTADLAAGRVTTVSGLTGPAAVAGEDETAPGLVAGRFGGREPTAVACSAPAPHAWFTGVGAGAG HTSVLELANPDSGTAVADITVYGRGGVVDAPRLRGVSVPGGTSVRLDLGSVIPRRDELAIEVVASRGRLGASVLDRYDEV GAAELTQDWLPAQAEPATDNLLMGLAPGGGRRTLVVANGTDDEVRADVRVVTDDSVFAPKGLHEIRIAPQSVQRVAVSHV LGPAISDGATGLLVTATAPVTATLRSFVEGDLSHAVADQTLDGPATVLLPEGGKGVAKTVQLAGATRTGAVTVVARSASG QELDSTRVDITPDRGVTVKLPADAVLVTVTPERTTLAGAVLVSGKGKGRAKGAAVVPLTTPELNGLVPDVRPGLP >Mature_474_residues SHSAPSAPGRRSTRRGFRPDVTTVLAVGLPVLCALALLLVQAPGALDADHPPTRVALTRATLVCPSAVEDADDVALTSAA DDAQGQVQVGLGDELRTADLAAGRVTTVSGLTGPAAVAGEDETAPGLVAGRFGGREPTAVACSAPAPHAWFTGVGAGAGH TSVLELANPDSGTAVADITVYGRGGVVDAPRLRGVSVPGGTSVRLDLGSVIPRRDELAIEVVASRGRLGASVLDRYDEVG AAELTQDWLPAQAEPATDNLLMGLAPGGGRRTLVVANGTDDEVRADVRVVTDDSVFAPKGLHEIRIAPQSVQRVAVSHVL GPAISDGATGLLVTATAPVTATLRSFVEGDLSHAVADQTLDGPATVLLPEGGKGVAKTVQLAGATRTGAVTVVARSASGQ ELDSTRVDITPDRGVTVKLPADAVLVTVTPERTTLAGAVLVSGKGKGRAKGAAVVPLTTPELNGLVPDVRPGLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47818; Mature: 47686
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHSAPSAPGRRSTRRGFRPDVTTVLAVGLPVLCALALLLVQAPGALDADHPPTRVALTR CCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE ATLVCPSAVEDADDVALTSAADDAQGQVQVGLGDELRTADLAAGRVTTVSGLTGPAAVAG EEEECCHHHCCCCCEEEECCCCCCCCEEEECCCCCCCHHHHCCCCEEEECCCCCCCEECC EDETAPGLVAGRFGGREPTAVACSAPAPHAWFTGVGAGAGHTSVLELANPDSGTAVADIT CCCCCCCEEEECCCCCCCCEEEECCCCCCHHEECCCCCCCCCEEEEECCCCCCCEEEEEE VYGRGGVVDAPRLRGVSVPGGTSVRLDLGSVIPRRDELAIEVVASRGRLGASVLDRYDEV EECCCCCCCCCCCCEEECCCCCEEEEEHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHC GAAELTQDWLPAQAEPATDNLLMGLAPGGGRRTLVVANGTDDEVRADVRVVTDDSVFAPK CHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEEEECCCEECCC GLHEIRIAPQSVQRVAVSHVLGPAISDGATGLLVTATAPVTATLRSFVEGDLSHAVADQT CCCEEEECHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCC LDGPATVLLPEGGKGVAKTVQLAGATRTGAVTVVARSASGQELDSTRVDITPDRGVTVKL CCCCEEEEEECCCCCHHHEEEECCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEE PADAVLVTVTPERTTLAGAVLVSGKGKGRAKGAAVVPLTTPELNGLVPDVRPGLP CCCEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure SHSAPSAPGRRSTRRGFRPDVTTVLAVGLPVLCALALLLVQAPGALDADHPPTRVALTR CCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE ATLVCPSAVEDADDVALTSAADDAQGQVQVGLGDELRTADLAAGRVTTVSGLTGPAAVAG EEEECCHHHCCCCCEEEECCCCCCCCEEEECCCCCCCHHHHCCCCEEEECCCCCCCEECC EDETAPGLVAGRFGGREPTAVACSAPAPHAWFTGVGAGAGHTSVLELANPDSGTAVADIT CCCCCCCEEEECCCCCCCCEEEECCCCCCHHEECCCCCCCCCEEEEECCCCCCCEEEEEE VYGRGGVVDAPRLRGVSVPGGTSVRLDLGSVIPRRDELAIEVVASRGRLGASVLDRYDEV EECCCCCCCCCCCCEEECCCCCEEEEEHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHC GAAELTQDWLPAQAEPATDNLLMGLAPGGGRRTLVVANGTDDEVRADVRVVTDDSVFAPK CHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEEEEECCCEECCC GLHEIRIAPQSVQRVAVSHVLGPAISDGATGLLVTATAPVTATLRSFVEGDLSHAVADQT CCCEEEECHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCC LDGPATVLLPEGGKGVAKTVQLAGATRTGAVTVVARSASGQELDSTRVDITPDRGVTVKL CCCCEEEEEECCCCCHHHEEEECCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEE PADAVLVTVTPERTTLAGAVLVSGKGKGRAKGAAVVPLTTPELNGLVPDVRPGLP CCCEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA