Click here to switch to the map view.

The map label for this gene is yciA [C]

Identifier: 119715633

GI number: 119715633

Start: 1475702

End: 1476220

Strand: Direct

Name: yciA [C]

Synonym: Noca_1397

Alternate gene names: 119715633

Gene position: 1475702-1476220 (Clockwise)

Preceding gene: 119715629

Following gene: 119715634

Centisome position: 29.6

GC content: 73.41

Gene sequence:

>519_bases
ATGGCACCGGATCCGGACCTGCACGGCCTGCCGCCGTCCTACGCGCGCGTCTCGCTGGCGATCGTCACCTCCAGCGCGGA
GGCGAACCTGCTCGGCAACATCCACGGCGGCGAGATCGCGAAGCTGGCCGACTCGACCGCGGGCGCCGTCGCGGCACGGC
ACAGCGGAGGGCCCGCGGTCACCGCGGTCATGGACGAGATGGCGTTCCTGGAGCCGGTGCACGTGGGCGACATCGTCCGC
ACCCTGGCCCAGGTCAACTGGGCCGGGCGGTCCTCGATGGAGATCGGCGTGCGGGTCGAGACCCAGCCGTGGAACGACCC
CTCGACGACGTCGCTGCACGTGGCGTCGGCGTACTTCGTGTTCGTCGCCATCGACGGCGCCGGGCGGGCGCGCCGGGTGC
CGGGACTGGTGCCTGAGACGCCCGACGAGGTCCGCCGGATGCGGGAGGCCGAGATCCGACGGGCGAACCGGCTCGCGCGA
CGTGAGCAGATCGAGGCCGGGCGCCTTCCCGGCGGCTGA

Upstream 100 bases:

>100_bases
GCCGCGCGTCCGAGTGATCGTCGAGCCGGTCGGGGGGCGGCGGCCCTCACGTGGCCGCTGACGCGTGGGGACGCGGTACG
GCGGCGGTAGCGTGCCGGAC

Downstream 100 bases:

>100_bases
TCGACTTCCCTCGGCGCGTCGCGCCGGGATGTGACGGGTGTGACTGGTGATACTGGCGGGCAGCAGCACCCTTCCCCGTT
CCACTTGCAGAGAGGCATCT

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MAPDPDLHGLPPSYARVSLAIVTSSAEANLLGNIHGGEIAKLADSTAGAVAARHSGGPAVTAVMDEMAFLEPVHVGDIVR
TLAQVNWAGRSSMEIGVRVETQPWNDPSTTSLHVASAYFVFVAIDGAGRARRVPGLVPETPDEVRRMREAEIRRANRLAR
REQIEAGRLPGG

Sequences:

>Translated_172_residues
MAPDPDLHGLPPSYARVSLAIVTSSAEANLLGNIHGGEIAKLADSTAGAVAARHSGGPAVTAVMDEMAFLEPVHVGDIVR
TLAQVNWAGRSSMEIGVRVETQPWNDPSTTSLHVASAYFVFVAIDGAGRARRVPGLVPETPDEVRRMREAEIRRANRLAR
REQIEAGRLPGG
>Mature_171_residues
APDPDLHGLPPSYARVSLAIVTSSAEANLLGNIHGGEIAKLADSTAGAVAARHSGGPAVTAVMDEMAFLEPVHVGDIVRT
LAQVNWAGRSSMEIGVRVETQPWNDPSTTSLHVASAYFVFVAIDGAGRARRVPGLVPETPDEVRRMREAEIRRANRLARR
EQIEAGRLPGG

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI32528286, Length=162, Percent_Identity=35.1851851851852, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI32528284, Length=162, Percent_Identity=35.1851851851852, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI32528282, Length=162, Percent_Identity=35.1851851851852, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI75709208, Length=150, Percent_Identity=36.6666666666667, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI22165355, Length=149, Percent_Identity=31.5436241610738, Blast_Score=69, Evalue=1e-12,
Organism=Homo sapiens, GI22165400, Length=149, Percent_Identity=31.5436241610738, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 18279; Mature: 18148

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPDPDLHGLPPSYARVSLAIVTSSAEANLLGNIHGGEIAKLADSTAGAVAARHSGGPAV
CCCCCCCCCCCCCHHEEEEEEEECCCCCCEEECCCCCHHHHHHCCCCHHEEEECCCCCHH
TAVMDEMAFLEPVHVGDIVRTLAQVNWAGRSSMEIGVRVETQPWNDPSTTSLHVASAYFV
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEE
FVAIDGAGRARRVPGLVPETPDEVRRMREAEIRRANRLARREQIEAGRLPGG
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
APDPDLHGLPPSYARVSLAIVTSSAEANLLGNIHGGEIAKLADSTAGAVAARHSGGPAV
CCCCCCCCCCCCHHEEEEEEEECCCCCCEEECCCCCHHHHHHCCCCHHEEEECCCCCHH
TAVMDEMAFLEPVHVGDIVRTLAQVNWAGRSSMEIGVRVETQPWNDPSTTSLHVASAYFV
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEE
FVAIDGAGRARRVPGLVPETPDEVRRMREAEIRRANRLARREQIEAGRLPGG
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9784136 [H]