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The map label for this gene is ssb [H]

Identifier: 119715604

GI number: 119715604

Start: 1445438

End: 1445995

Strand: Direct

Name: ssb [H]

Synonym: Noca_1368

Alternate gene names: 119715604

Gene position: 1445438-1445995 (Clockwise)

Preceding gene: 119715603

Following gene: 119715605

Centisome position: 28.99

GC content: 73.12

Gene sequence:

>558_bases
GTGGGCTCCGGCACCGGTCCCCACAGGGTCTCCCGCCGTACCGTCCGGGCGTCGGCGCGGCCGCCCAGCCTGGAACCGGG
ACAACCCCGACGAGGCAAGGAGACCTTCATGAACGAATCGCTCATCACGATGCACGGCTGGCTCGGCAGCGACGTGACCC
TGCGGCGCGCGGGCGACGTCTCGGTGGCCAGCTTCCGGGTGGCGTGCACGCCGCGACGCTTCAACCGGCGCACCGAGAAC
TGGTCCGACGGCGCGACCCAGTGGTACACGGTCAACGTCTGGCGCCAGCTCGCCGAGAACTGCGCATCCTCGTTGCGCCG
CGGGGACCCGATCGTCGTGCACGGCCGCCTCGACCTGCGGGTCTGGGTCAACGCCGAGAACGTCGAGGTCAGTGGCTTCG
AGATCGAGGCCACCCACATCGGCCACGACCTCGCCCGCGGCACCAGCCGGTTCACCCGGACGCCGCGCCGTGACCAGGAC
GGCGCCGCCGAGGCGGCCGTCGCGGAGCCGACGCCGGAGGCCGCCCAGGAGGCGTCGCGGGAGGAGGTCGCCGCGTGA

Upstream 100 bases:

>100_bases
TGGAGATCGAGCTGGCCGCCTACACGGCGGTCCGCAACGGCCTGGCCCGCGCGCTCGCCTGAGGCTGAGCCTCACTCCCG
ACCCGGCTGCCGTCCACAGC

Downstream 100 bases:

>100_bases
GAGCCGTCGGCACTCGGCGTCGCGGCCCCCCGATCGGGTCCCGCCGCCGTTCGCCAACTAGGCTCGGGCCCCATGGCGGA
ATATGTGTTCACCCTGCGCA

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MGSGTGPHRVSRRTVRASARPPSLEPGQPRRGKETFMNESLITMHGWLGSDVTLRRAGDVSVASFRVACTPRRFNRRTEN
WSDGATQWYTVNVWRQLAENCASSLRRGDPIVVHGRLDLRVWVNAENVEVSGFEIEATHIGHDLARGTSRFTRTPRRDQD
GAAEAAVAEPTPEAAQEASREEVAA

Sequences:

>Translated_185_residues
MGSGTGPHRVSRRTVRASARPPSLEPGQPRRGKETFMNESLITMHGWLGSDVTLRRAGDVSVASFRVACTPRRFNRRTEN
WSDGATQWYTVNVWRQLAENCASSLRRGDPIVVHGRLDLRVWVNAENVEVSGFEIEATHIGHDLARGTSRFTRTPRRDQD
GAAEAAVAEPTPEAAQEASREEVAA
>Mature_184_residues
GSGTGPHRVSRRTVRASARPPSLEPGQPRRGKETFMNESLITMHGWLGSDVTLRRAGDVSVASFRVACTPRRFNRRTENW
SDGATQWYTVNVWRQLAENCASSLRRGDPIVVHGRLDLRVWVNAENVEVSGFEIEATHIGHDLARGTSRFTRTPRRDQDG
AAEAAVAEPTPEAAQEASREEVAA

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 20475; Mature: 20344

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSGTGPHRVSRRTVRASARPPSLEPGQPRRGKETFMNESLITMHGWLGSDVTLRRAGDV
CCCCCCCHHHHHHHEECCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCEEEEECCCC
SVASFRVACTPRRFNRRTENWSDGATQWYTVNVWRQLAENCASSLRRGDPIVVHGRLDLR
EEEEEEEEECCHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEEEEE
VWVNAENVEVSGFEIEATHIGHDLARGTSRFTRTPRRDQDGAAEAAVAEPTPEAAQEASR
EEEECCCEEECCEEEEHHHHCHHHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHH
EEVAA
HHCCC
>Mature Secondary Structure 
GSGTGPHRVSRRTVRASARPPSLEPGQPRRGKETFMNESLITMHGWLGSDVTLRRAGDV
CCCCCCHHHHHHHEECCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCEEEEECCCC
SVASFRVACTPRRFNRRTENWSDGATQWYTVNVWRQLAENCASSLRRGDPIVVHGRLDLR
EEEEEEEEECCHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEEEEE
VWVNAENVEVSGFEIEATHIGHDLARGTSRFTRTPRRDQDGAAEAAVAEPTPEAAQEASR
EEEECCCEEECCEEEEHHHHCHHHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHH
EEVAA
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]