| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715603
Identifier: 119715603
GI number: 119715603
Start: 1443732
End: 1445399
Strand: Direct
Name: 119715603
Synonym: Noca_1367
Alternate gene names: NA
Gene position: 1443732-1445399 (Clockwise)
Preceding gene: 119715602
Following gene: 119715604
Centisome position: 28.96
GC content: 75.18
Gene sequence:
>1668_bases ATGACGTCCTTGCTCGAGGGGGCCAAGAAGCTGGTCACCCGTGGTACCGACATCGGTGCCCGCATCGAGGGTCTCGACGC GGCGACGTACGCCGCGCGCGGCCGGCTCGACGACGGGCTCGTCACCGAGGCGCAGGCGGTCGTCGACCGCGCCACCGGGC GGCTGCGGCTCTCGGCGACCCACACGGTGGTCGCGATCGGTGGCGCGACCGGCTCGGGCAAGTCCTCGACGTTCAATGCC CTCACCGGCCTCGAGCTGTCCGCCGTCGGCGTACGCCGGCCGACCACCTCCTGGGCGTCCGCCTGCGTGTGGGGACGCGA CGGTGCCGAGGAGCTGCTCGAGTGGCTGGGCATCCCGCCGCGGCACCAGACCACGCGGGACTCGATGCTCGACTCCGGGC GGCGCGGCGCCGACTCCGAGCTCGACGGGGTGGTGCTCCTCGACCTGCCCGACCACGACTCGACGGAGGTCGCGCACCAC CTCGAGGTGAACCGCCTGGTCGACCTCGCGGACCTCCTGGTCTGGGTCCTCGACCCGCAGAAGTACGCCGACGCGGCCAT CCACGACCGCTACCTCGCGCCGTCCGCGGAGCACCAGGACGTGATGCTGGTCGTCTTGAACCACATCGACACGGTGCCGG AGGAGCGCCGCCAGTCGATGCTCGACGACGTACGCCGGCTGCTCGACGCCGACGGTCTCGACCGGGTGCCGGTGCTCCCG GTCAGCGCCCGGCACGGCATCGGCATCCCCGAGCTGCGGGCCGAGATCGCCCGACGGGCCGGCGAGAAGCGTGCCACCCG GTCGCGGATCGACGCGGACGTGAAGGCCGCCGCCAGCGAGCTGTCGGCTGCCTCCGGCGAGGCCCCGACCCGGGTCCTGG CACCGGAGCGGGTGACCGCCCTCGACGACGCCTTCGCCGAGGCCGCGGGCGTGCCGACGATCGTCGACGCCGTGGAGCGC TCGACCCGGATGCGGCTGGGTCGCGCCACCGGCTGGCCCGTGCTCACCTGGATCTCGGGGATCAAGCCGGACCCGCTGCG CCACCTCGACCTCGACGCGGACGCCGAAGGCCGCCAGCTCTCGGGCCGCCAGCTCGCGGGTGGTCGCGCGACCACGCCGC AGACGGCGCAGGTGCAGCGCGCCCGGGTCGACACCGAGGTGCGCACCCTCGCCGACGACGTCTCCAGCGGCCTCGCCCAT CCGTGGGTCGAGGCGGTGCGCCGCGCGTCGGTCTCACGGCTCGACGAGCTGGGTGAGCGGCTCGACGCCGCGCTCGCCGG CGCCGAGGTCGGCGCGGCCCGGCTGCCGTTCTGGGCCGGCGTGGTGCGGGTGCTCCAGTGGCTGCTGCTCCTCGCCAGCC TCGCGGGACTGGTGTGGACGGGCGTGCTCGCCGGCTCCGGCAAGCTCCAGGATGCCGACACCCCGCAGGTCGCCGGGGTG GCGCTCGCGCTGGTGCTCCTGGTCGGCGGGATCGGCCTCGGGCTGCTCCTCGCCCTGGTGAGCCGGATCGGGGTCGCCGG GGCCGCGCGCCGGCGCGCGGAGGCGACCGACGAACGCCTCCGCGGGGCGGTCGCCGAGGTCTCGCACGAGCTGGTCGTCG ACCCGGTGGAGATCGAGCTGGCCGCCTACACGGCGGTCCGCAACGGCCTGGCCCGCGCGCTCGCCTGA
Upstream 100 bases:
>100_bases CGGGCGGGAGTCGAGCCCACGTCGTGAGCGCCCGAGCATCTAGGGTGGGAGGAGACCTGTCCCACCGCCGCACCCCGCTG CTGACGGGTCGAGGGAGAAC
Downstream 100 bases:
>100_bases GGCTGAGCCTCACTCCCGACCCGGCTGCCGTCCACAGCGTGGGCTCCGGCACCGGTCCCCACAGGGTCTCCCGCCGTACC GTCCGGGCGTCGGCGCGGCC
Product: putative ABC transporter
Products: NA
Alternate protein names: GTPase; LOW QUALITY PROTEIN ABC Transporter
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MTSLLEGAKKLVTRGTDIGARIEGLDAATYAARGRLDDGLVTEAQAVVDRATGRLRLSATHTVVAIGGATGSGKSSTFNA LTGLELSAVGVRRPTTSWASACVWGRDGAEELLEWLGIPPRHQTTRDSMLDSGRRGADSELDGVVLLDLPDHDSTEVAHH LEVNRLVDLADLLVWVLDPQKYADAAIHDRYLAPSAEHQDVMLVVLNHIDTVPEERRQSMLDDVRRLLDADGLDRVPVLP VSARHGIGIPELRAEIARRAGEKRATRSRIDADVKAAASELSAASGEAPTRVLAPERVTALDDAFAEAAGVPTIVDAVER STRMRLGRATGWPVLTWISGIKPDPLRHLDLDADAEGRQLSGRQLAGGRATTPQTAQVQRARVDTEVRTLADDVSSGLAH PWVEAVRRASVSRLDELGERLDAALAGAEVGAARLPFWAGVVRVLQWLLLLASLAGLVWTGVLAGSGKLQDADTPQVAGV ALALVLLVGGIGLGLLLALVSRIGVAGAARRRAEATDERLRGAVAEVSHELVVDPVEIELAAYTAVRNGLARALA
Sequences:
>Translated_555_residues MTSLLEGAKKLVTRGTDIGARIEGLDAATYAARGRLDDGLVTEAQAVVDRATGRLRLSATHTVVAIGGATGSGKSSTFNA LTGLELSAVGVRRPTTSWASACVWGRDGAEELLEWLGIPPRHQTTRDSMLDSGRRGADSELDGVVLLDLPDHDSTEVAHH LEVNRLVDLADLLVWVLDPQKYADAAIHDRYLAPSAEHQDVMLVVLNHIDTVPEERRQSMLDDVRRLLDADGLDRVPVLP VSARHGIGIPELRAEIARRAGEKRATRSRIDADVKAAASELSAASGEAPTRVLAPERVTALDDAFAEAAGVPTIVDAVER STRMRLGRATGWPVLTWISGIKPDPLRHLDLDADAEGRQLSGRQLAGGRATTPQTAQVQRARVDTEVRTLADDVSSGLAH PWVEAVRRASVSRLDELGERLDAALAGAEVGAARLPFWAGVVRVLQWLLLLASLAGLVWTGVLAGSGKLQDADTPQVAGV ALALVLLVGGIGLGLLLALVSRIGVAGAARRRAEATDERLRGAVAEVSHELVVDPVEIELAAYTAVRNGLARALA >Mature_554_residues TSLLEGAKKLVTRGTDIGARIEGLDAATYAARGRLDDGLVTEAQAVVDRATGRLRLSATHTVVAIGGATGSGKSSTFNAL TGLELSAVGVRRPTTSWASACVWGRDGAEELLEWLGIPPRHQTTRDSMLDSGRRGADSELDGVVLLDLPDHDSTEVAHHL EVNRLVDLADLLVWVLDPQKYADAAIHDRYLAPSAEHQDVMLVVLNHIDTVPEERRQSMLDDVRRLLDADGLDRVPVLPV SARHGIGIPELRAEIARRAGEKRATRSRIDADVKAAASELSAASGEAPTRVLAPERVTALDDAFAEAAGVPTIVDAVERS TRMRLGRATGWPVLTWISGIKPDPLRHLDLDADAEGRQLSGRQLAGGRATTPQTAQVQRARVDTEVRTLADDVSSGLAHP WVEAVRRASVSRLDELGERLDAALAGAEVGAARLPFWAGVVRVLQWLLLLASLAGLVWTGVLAGSGKLQDADTPQVAGVA LALVLLVGGIGLGLLLALVSRIGVAGAARRRAEATDERLRGAVAEVSHELVVDPVEIELAAYTAVRNGLARALA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58875; Mature: 58743
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLLEGAKKLVTRGTDIGARIEGLDAATYAARGRLDDGLVTEAQAVVDRATGRLRLSAT CCHHHHHHHHHHHCCCCCCCEECCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEC HTVVAIGGATGSGKSSTFNALTGLELSAVGVRRPTTSWASACVWGRDGAEELLEWLGIPP EEEEEEECCCCCCCCCCHHHHHCCEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCC RHQTTRDSMLDSGRRGADSELDGVVLLDLPDHDSTEVAHHLEVNRLVDLADLLVWVLDPQ CCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH KYADAAIHDRYLAPSAEHQDVMLVVLNHIDTVPEERRQSMLDDVRRLLDADGLDRVPVLP HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE VSARHGIGIPELRAEIARRAGEKRATRSRIDADVKAAASELSAASGEAPTRVLAPERVTA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHH LDDAFAEAAGVPTIVDAVERSTRMRLGRATGWPVLTWISGIKPDPLRHLDLDADAEGRQL HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC SGRQLAGGRATTPQTAQVQRARVDTEVRTLADDVSSGLAHPWVEAVRRASVSRLDELGER CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LDAALAGAEVGAARLPFWAGVVRVLQWLLLLASLAGLVWTGVLAGSGKLQDADTPQVAGV HHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH ALALVLLVGGIGLGLLLALVSRIGVAGAARRRAEATDERLRGAVAEVSHELVVDPVEIEL HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AAYTAVRNGLARALA HHHHHHHHHHHHHCC >Mature Secondary Structure TSLLEGAKKLVTRGTDIGARIEGLDAATYAARGRLDDGLVTEAQAVVDRATGRLRLSAT CHHHHHHHHHHHCCCCCCCEECCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEC HTVVAIGGATGSGKSSTFNALTGLELSAVGVRRPTTSWASACVWGRDGAEELLEWLGIPP EEEEEEECCCCCCCCCCHHHHHCCEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCC RHQTTRDSMLDSGRRGADSELDGVVLLDLPDHDSTEVAHHLEVNRLVDLADLLVWVLDPQ CCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH KYADAAIHDRYLAPSAEHQDVMLVVLNHIDTVPEERRQSMLDDVRRLLDADGLDRVPVLP HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE VSARHGIGIPELRAEIARRAGEKRATRSRIDADVKAAASELSAASGEAPTRVLAPERVTA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHH LDDAFAEAAGVPTIVDAVERSTRMRLGRATGWPVLTWISGIKPDPLRHLDLDADAEGRQL HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC SGRQLAGGRATTPQTAQVQRARVDTEVRTLADDVSSGLAHPWVEAVRRASVSRLDELGER CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LDAALAGAEVGAARLPFWAGVVRVLQWLLLLASLAGLVWTGVLAGSGKLQDADTPQVAGV HHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH ALALVLLVGGIGLGLLLALVSRIGVAGAARRRAEATDERLRGAVAEVSHELVVDPVEIEL HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AAYTAVRNGLARALA HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA