| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715558
Identifier: 119715558
GI number: 119715558
Start: 1394199
End: 1395014
Strand: Direct
Name: 119715558
Synonym: Noca_1322
Alternate gene names: NA
Gene position: 1394199-1395014 (Clockwise)
Preceding gene: 119715557
Following gene: 119715559
Centisome position: 27.96
GC content: 69.98
Gene sequence:
>816_bases GTGACCGGGACCGCCTCCGCTCCGGGCCCCGGGCTGGGCCACGCGCTGGACCTGTCGTCGACCCGGCCGGTCCCGTTCAG CCGGCTGGTCCGGGTCGAGCTGCGCAAGTCCTACGACACCCGCGCCGGCTTCTGGCTGCTCGCGGTGATCGGCCTGCTGG TGCTGGCCGCGGAGATCATCGTGCTCGCCGTGGTGACGACGCAGGACGAGGCGATCGCGTTCGGCGACTTCATCGGCACC GCGGCGTTCCTCACCTCGTTCCTCCTGCCGGTGCTCGGGATCATGGTGCTCACCAGCGAGTGGAGCCAACGCACCGCGAT GGTCACCTTCGCCCTCGAGCCGCGCCGCCCGCTGGTGATCGGCGCCAAGGCGCTGGTCGGTGTGCTCCTGACCCTCGCCA CGGTCGCGGTCTCGATCGTCGTCGGGCTGGTGTGCAACCTGCTCTACGGGCTGATCGAGGGCCACGCCGACTGGACCTTC GGATGGTCGGACTTCGCCGCCTTCCTGATCACCCAGGTGCTTGCGATGCTCGGCGGCTTCGCGCTCGCGGCCCTGCTCCT GAACACCCCGGCCGCGATCGTCGTGTTCTTCGTCTACAAGTGGGTGCTTCCTGGCCTCTTCGCGCTCGGCGCCGCGCTGA TGGGCTGGTTCGACGCGCTGCAGCCCTGGATCGACTTCCAGAGCGCGCAGGAGGTCATCTGGGAGATGTCGGGCACTGGG ACGGAGTGGGCCCAGCTGGTCGTGTCCGGGATCGTCTGGCTCGGCCTGCCCCTCGGGTTCGGCACCTGGCGGGTGCTGCG CGCGGAGGTGAAGTAG
Upstream 100 bases:
>100_bases GGGACCGACTGGGCGCACTTCGCGACCTCGGGCTTCATCTGGCTGGTCGTGCCACTGACCATCGGCTTCTGGCGGGTGCT GCGGGCGGAGGTGAAGTGAG
Downstream 100 bases:
>100_bases CCCCGGCTAGGGTCCTGGGCATGAGTGCAGCACCACGCGAGGACGGCCGGGCCGACGACGAGCTCCGTCCGATCACGATC ACCCGGCACTGGCTGGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTGTASAPGPGLGHALDLSSTRPVPFSRLVRVELRKSYDTRAGFWLLAVIGLLVLAAEIIVLAVVTTQDEAIAFGDFIGT AAFLTSFLLPVLGIMVLTSEWSQRTAMVTFALEPRRPLVIGAKALVGVLLTLATVAVSIVVGLVCNLLYGLIEGHADWTF GWSDFAAFLITQVLAMLGGFALAALLLNTPAAIVVFFVYKWVLPGLFALGAALMGWFDALQPWIDFQSAQEVIWEMSGTG TEWAQLVVSGIVWLGLPLGFGTWRVLRAEVK
Sequences:
>Translated_271_residues MTGTASAPGPGLGHALDLSSTRPVPFSRLVRVELRKSYDTRAGFWLLAVIGLLVLAAEIIVLAVVTTQDEAIAFGDFIGT AAFLTSFLLPVLGIMVLTSEWSQRTAMVTFALEPRRPLVIGAKALVGVLLTLATVAVSIVVGLVCNLLYGLIEGHADWTF GWSDFAAFLITQVLAMLGGFALAALLLNTPAAIVVFFVYKWVLPGLFALGAALMGWFDALQPWIDFQSAQEVIWEMSGTG TEWAQLVVSGIVWLGLPLGFGTWRVLRAEVK >Mature_270_residues TGTASAPGPGLGHALDLSSTRPVPFSRLVRVELRKSYDTRAGFWLLAVIGLLVLAAEIIVLAVVTTQDEAIAFGDFIGTA AFLTSFLLPVLGIMVLTSEWSQRTAMVTFALEPRRPLVIGAKALVGVLLTLATVAVSIVVGLVCNLLYGLIEGHADWTFG WSDFAAFLITQVLAMLGGFALAALLLNTPAAIVVFFVYKWVLPGLFALGAALMGWFDALQPWIDFQSAQEVIWEMSGTGT EWAQLVVSGIVWLGLPLGFGTWRVLRAEVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29080; Mature: 28949
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTASAPGPGLGHALDLSSTRPVPFSRLVRVELRKSYDTRAGFWLLAVIGLLVLAAEII CCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VLAVVTTQDEAIAFGDFIGTAAFLTSFLLPVLGIMVLTSEWSQRTAMVTFALEPRRPLVI HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEE GAKALVGVLLTLATVAVSIVVGLVCNLLYGLIEGHADWTFGWSDFAAFLITQVLAMLGGF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH ALAALLLNTPAAIVVFFVYKWVLPGLFALGAALMGWFDALQPWIDFQSAQEVIWEMSGTG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TEWAQLVVSGIVWLGLPLGFGTWRVLRAEVK HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC >Mature Secondary Structure TGTASAPGPGLGHALDLSSTRPVPFSRLVRVELRKSYDTRAGFWLLAVIGLLVLAAEII CCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VLAVVTTQDEAIAFGDFIGTAAFLTSFLLPVLGIMVLTSEWSQRTAMVTFALEPRRPLVI HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEE GAKALVGVLLTLATVAVSIVVGLVCNLLYGLIEGHADWTFGWSDFAAFLITQVLAMLGGF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH ALAALLLNTPAAIVVFFVYKWVLPGLFALGAALMGWFDALQPWIDFQSAQEVIWEMSGTG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TEWAQLVVSGIVWLGLPLGFGTWRVLRAEVK HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA