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The map label for this gene is yoaH [H]

Identifier: 119715529

GI number: 119715529

Start: 1366420

End: 1368048

Strand: Reverse

Name: yoaH [H]

Synonym: Noca_1293

Alternate gene names: 119715529

Gene position: 1368048-1366420 (Counterclockwise)

Preceding gene: 119715530

Following gene: 119715523

Centisome position: 27.44

GC content: 70.41

Gene sequence:

>1629_bases
GTGTTGAAGTTCCTGCGCAAGGCCGACAACCTGCAGATCGGAGTGCGCCTGGGCGCGGTGTTCGCCCTGTGCGGCGTCGT
ATGGCTGGGCGCGTTCGCCCTGGACCTGAAGACGCAGCACGACGCCGGCGTGGTCGAGGACCAGGTCACGGCGGCCCAAC
AGGGGCAGCAGATCGGCGACCAGCTCCTCATCGCCATCAACGACATCACCGGCTGGCAGGGCCTCTACATCGCCGACGCC
GCCGCGATGGGTGTCGAGAAGGGCCTGGCCGACGACGCCTACAACGTGCAGGGCTTCACCGAGTCGCAGGCGGGCATCGA
CGACCTCTTCGCCACCATGGACACCTCGATGCTCACACCCGAGGAGAGCGCGATCATCGCCGAGGCGAAGGCCAACTTCG
ACCAGTTCTTCGCGGAGGACGTCAAGCTGCGCGCCCAGCTGAAGAGCCAGGGCCTCGACGCGCTGCCCGCGGTGATGGAC
AGCATCAACGGCGGGCCCGCCGGGGAGTCCTGGTCCGCGACGTACGACGCCTACGACCGCTTCCACAAGCTCATCGACGC
CCGGGTGGAGAAGCTGCAGAACCAGCAGGACGCGGATCTGGCGGCCGGCAAGCGGCTGGTCCTGATCGCGCTCGGCCTGG
CCATCGCGGTGGCCGTCGCGATGCTGCTGATCGTCACTCGCTCGGTGGTGCGGCCGATGCGACACATGGTCACCCAGCTG
CGCCGCGTGGCCGAGGGCCACCTGGACGTGCGTGCCGGCCTGGACCGGCGCGACGAGGTCGGGCAGATGTCCACCGCCCT
CGACGAGGCGCTCGACTCGATCTCCGGGTCGCTGCGTCAGATGAGCTCGAACGCCGACGACCTCAGCGCGGCCTCCGAGC
GGCTCAGCACGGTCTCGACGCAGATGTCCGGCACCGCCGCCGACGCCGCGAGCCAGACCGGCCTGGTCGCGGCCGCCGCC
GACCAGGTGTCCCACAACGTGCAGACCGTCGCCGCCGGCACCGAGCAGATGTCGGCATCGATCCGCGAGATCGCCCACAA
CGCCACCGATGCCGCCGCGGTCGCCGGTCGCGCCGTCGAGGCCGCCGAAGCCACCACGGCGACCGTCACGAAGCTCGGCG
AGTCCTCCTCCGAGGTCGGCAACGTGATCAAGGTGATCAACTCGATCGCCGAGCAGACCAACCTGCTGGCGCTCAACGCC
ACCATCGAGGCCGCCCGCGCCGGCGAGGCCGGCAAGGGCTTCGCCGTGGTCGCCAACGAGGTCAAGGAGCTGGCCCAGGA
GACCGCCCGCGCCACCGAGGACATCAGCCGCCGGATCGAGGCCATCCAGGCCGACACCGGCGAGGCCGTCGTCGCCATCG
GCGAGATCTCCGGGATCATCGCCCAGATCAGCGACACCCAGACCACGATCGCCTCGGCGGTCGAGGAGCAGACCGCGACC
ACCAACGAGATGTCGCGCAACGTCGCCGAGGCCGCCACCGGCTCGGCCGACATCGCGCAGACCATCACCGGTGTCGCCCG
GGCCGCGACCGAGAACACCGCCGCGGCCTCCAGCACCAGCCAGGCCGCCGAGGACCTGGCCCGGATGGCCGCCGACATGC
AGGCGCTGGTCGGCCGCTTCACCTACTGA

Upstream 100 bases:

>100_bases
CCTCGCGCGAACCCTCAGCTGAGCGGGCTTCTCGCCGATCTCTGGGCAACGGCAGCGGGCGATCCCTTGCTGCCTCCCCC
ACGTGCGGATGAGGAGAGTC

Downstream 100 bases:

>100_bases
CGCAGCGCCGACCCGGATCGGGGGAGGTCGAGGGGGGACGGCCCGGCTCTCACGAGAGCCGGGCCGCGACCTCCTCGGCG
GCCCGGCGGACGACCGGGCC

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MLKFLRKADNLQIGVRLGAVFALCGVVWLGAFALDLKTQHDAGVVEDQVTAAQQGQQIGDQLLIAINDITGWQGLYIADA
AAMGVEKGLADDAYNVQGFTESQAGIDDLFATMDTSMLTPEESAIIAEAKANFDQFFAEDVKLRAQLKSQGLDALPAVMD
SINGGPAGESWSATYDAYDRFHKLIDARVEKLQNQQDADLAAGKRLVLIALGLAIAVAVAMLLIVTRSVVRPMRHMVTQL
RRVAEGHLDVRAGLDRRDEVGQMSTALDEALDSISGSLRQMSSNADDLSAASERLSTVSTQMSGTAADAASQTGLVAAAA
DQVSHNVQTVAAGTEQMSASIREIAHNATDAAAVAGRAVEAAEATTATVTKLGESSSEVGNVIKVINSIAEQTNLLALNA
TIEAARAGEAGKGFAVVANEVKELAQETARATEDISRRIEAIQADTGEAVVAIGEISGIIAQISDTQTTIASAVEEQTAT
TNEMSRNVAEAATGSADIAQTITGVARAATENTAAASSTSQAAEDLARMAADMQALVGRFTY

Sequences:

>Translated_542_residues
MLKFLRKADNLQIGVRLGAVFALCGVVWLGAFALDLKTQHDAGVVEDQVTAAQQGQQIGDQLLIAINDITGWQGLYIADA
AAMGVEKGLADDAYNVQGFTESQAGIDDLFATMDTSMLTPEESAIIAEAKANFDQFFAEDVKLRAQLKSQGLDALPAVMD
SINGGPAGESWSATYDAYDRFHKLIDARVEKLQNQQDADLAAGKRLVLIALGLAIAVAVAMLLIVTRSVVRPMRHMVTQL
RRVAEGHLDVRAGLDRRDEVGQMSTALDEALDSISGSLRQMSSNADDLSAASERLSTVSTQMSGTAADAASQTGLVAAAA
DQVSHNVQTVAAGTEQMSASIREIAHNATDAAAVAGRAVEAAEATTATVTKLGESSSEVGNVIKVINSIAEQTNLLALNA
TIEAARAGEAGKGFAVVANEVKELAQETARATEDISRRIEAIQADTGEAVVAIGEISGIIAQISDTQTTIASAVEEQTAT
TNEMSRNVAEAATGSADIAQTITGVARAATENTAAASSTSQAAEDLARMAADMQALVGRFTY
>Mature_542_residues
MLKFLRKADNLQIGVRLGAVFALCGVVWLGAFALDLKTQHDAGVVEDQVTAAQQGQQIGDQLLIAINDITGWQGLYIADA
AAMGVEKGLADDAYNVQGFTESQAGIDDLFATMDTSMLTPEESAIIAEAKANFDQFFAEDVKLRAQLKSQGLDALPAVMD
SINGGPAGESWSATYDAYDRFHKLIDARVEKLQNQQDADLAAGKRLVLIALGLAIAVAVAMLLIVTRSVVRPMRHMVTQL
RRVAEGHLDVRAGLDRRDEVGQMSTALDEALDSISGSLRQMSSNADDLSAASERLSTVSTQMSGTAADAASQTGLVAAAA
DQVSHNVQTVAAGTEQMSASIREIAHNATDAAAVAGRAVEAAEATTATVTKLGESSSEVGNVIKVINSIAEQTNLLALNA
TIEAARAGEAGKGFAVVANEVKELAQETARATEDISRRIEAIQADTGEAVVAIGEISGIIAQISDTQTTIASAVEEQTAT
TNEMSRNVAEAATGSADIAQTITGVARAATENTAAASSTSQAAEDLARMAADMQALVGRFTY

Specific function: Receptor For The Attractant L-Serine And Related Amino Acids. Is Also Responsible For Chemotaxis Away From A Wide Range Of Repellents, Including Leucine, Indole, And Weak Acids. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of At

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=389, Percent_Identity=30.3341902313625, Blast_Score=122, Evalue=7e-29,
Organism=Escherichia coli, GI1787690, Length=348, Percent_Identity=30.7471264367816, Blast_Score=122, Evalue=8e-29,
Organism=Escherichia coli, GI1788195, Length=273, Percent_Identity=30.4029304029304, Blast_Score=115, Evalue=8e-27,
Organism=Escherichia coli, GI1788194, Length=357, Percent_Identity=29.4117647058824, Blast_Score=108, Evalue=9e-25,
Organism=Escherichia coli, GI1789453, Length=305, Percent_Identity=31.8032786885246, Blast_Score=102, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007891
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF05227 CHASE3; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 56542; Mature: 56542

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CC
>Mature Secondary Structure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CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]