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The map label for this gene is iclR [C]

Identifier: 119715528

GI number: 119715528

Start: 1365690

End: 1366370

Strand: Direct

Name: iclR [C]

Synonym: Noca_1292

Alternate gene names: 119715528

Gene position: 1365690-1366370 (Clockwise)

Preceding gene: 119715527

Following gene: 119715531

Centisome position: 27.39

GC content: 74.89

Gene sequence:

>681_bases
GTGGGCGGCCCGCAAGACCTCCTGATCCCTACACTCAGGAGCGTGCCGGCCGAGACCTCCCAGACGCTGGACCGCGGGCT
GCGGGTCCTCGACGTGCTCGCCCGCGCGAGCGACGGACTGACGGTCACCGAGCTGGCCGCCCGGCTCGAGGTCAACCGGA
CCGTCGTCTACCGCCTGGTGAGCACGCTCGAGCAGCACGCGCTGGTACGGCGGGATCCGCGCGGGCGGCTGCACCTGGGA
CTACGCGTGCTGCACCTGGCCTCGGCGGTGCAGCCGGTGCTGCGCGACCTCGCCGTACCCGTGCTGCGTGAGCTGGCCGA
GTCGGTCGGCTGCACGGCGCACCTCACGGTCGCCGACGGCGAGGAGGCGCTCGCGCTCGCGGTCGTCGAGCCGTCGTGGA
CCGACTTCCACGTGAGCTACCGGATCGGCGCGCGGCATCCGCTGAGCCAGGGTGCGGCCGGGAAGGCGATCCTGCTGGGC
CGGCGCTCCGACGGCGGGTCCGTCGCGGTGACGACCGGTGAGCTCCAGCCCGGAGCCCGGGGGATCGCTGCGCCCGTGCG
GGGCGTCGAGGGTCTCGAGGCGAGCGTCGGCATCATCACGCTGGGCACCGACCTCGACGTGGACGCCGTCGGCCCGGTCG
TCCGCCGGGCCGCCGAGGAGGTCGCGGCCCGGCTCTCGTGA

Upstream 100 bases:

>100_bases
ACGGGATCACCCACGCCGCGCTGCGCAAGGAGTGCGGCGGCCCGGCCGCGGCCGTCGCCACCGCCGACCAGCTGCACGCG
CGGATCGACCGGCTCCGGGA

Downstream 100 bases:

>100_bases
GAGCCGGGCCGTCCCCCCTCGACCTCCCCCGATCCGGGTCGGCGCTGCGTCAGTAGGTGAAGCGGCCGACCAGCGCCTGC
ATGTCGGCGGCCATCCGGGC

Product: regulatory proteins IclR

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator IclR Family; Differentiation Regulon; Iclr Family Transcriptional Regulator; Regulatory Proteins IclR; Differentiation Regulon Transcriptional Regulator; Transcriptional Regulator-Like Protein; Transcriptional Regulatory Protein; Regulatory Protein IclR; Transcriptional Regulator TrmB; IclR-Family Transcriptional Regulator

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MGGPQDLLIPTLRSVPAETSQTLDRGLRVLDVLARASDGLTVTELAARLEVNRTVVYRLVSTLEQHALVRRDPRGRLHLG
LRVLHLASAVQPVLRDLAVPVLRELAESVGCTAHLTVADGEEALALAVVEPSWTDFHVSYRIGARHPLSQGAAGKAILLG
RRSDGGSVAVTTGELQPGARGIAAPVRGVEGLEASVGIITLGTDLDVDAVGPVVRRAAEEVAARLS

Sequences:

>Translated_226_residues
MGGPQDLLIPTLRSVPAETSQTLDRGLRVLDVLARASDGLTVTELAARLEVNRTVVYRLVSTLEQHALVRRDPRGRLHLG
LRVLHLASAVQPVLRDLAVPVLRELAESVGCTAHLTVADGEEALALAVVEPSWTDFHVSYRIGARHPLSQGAAGKAILLG
RRSDGGSVAVTTGELQPGARGIAAPVRGVEGLEASVGIITLGTDLDVDAVGPVVRRAAEEVAARLS
>Mature_225_residues
GGPQDLLIPTLRSVPAETSQTLDRGLRVLDVLARASDGLTVTELAARLEVNRTVVYRLVSTLEQHALVRRDPRGRLHLGL
RVLHLASAVQPVLRDLAVPVLRELAESVGCTAHLTVADGEEALALAVVEPSWTDFHVSYRIGARHPLSQGAAGKAILLGR
RSDGGSVAVTTGELQPGARGIAAPVRGVEGLEASVGIITLGTDLDVDAVGPVVRRAAEEVAARLS

Specific function: Regulation Of The Glyoxylate Bypass Operon (ACEbak), Which Encodes Isocitrate Lyase, Malate Synthase As Well As Isocitrate Dehydrogenase Kinase/Phosphorylase. [C]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23748; Mature: 23616

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGPQDLLIPTLRSVPAETSQTLDRGLRVLDVLARASDGLTVTELAARLEVNRTVVYRLV
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
STLEQHALVRRDPRGRLHLGLRVLHLASAVQPVLRDLAVPVLRELAESVGCTAHLTVADG
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC
EEALALAVVEPSWTDFHVSYRIGARHPLSQGAAGKAILLGRRSDGGSVAVTTGELQPGAR
CCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCC
GIAAPVRGVEGLEASVGIITLGTDLDVDAVGPVVRRAAEEVAARLS
CCHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GGPQDLLIPTLRSVPAETSQTLDRGLRVLDVLARASDGLTVTELAARLEVNRTVVYRLV
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
STLEQHALVRRDPRGRLHLGLRVLHLASAVQPVLRDLAVPVLRELAESVGCTAHLTVADG
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC
EEALALAVVEPSWTDFHVSYRIGARHPLSQGAAGKAILLGRRSDGGSVAVTTGELQPGAR
CCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCC
GIAAPVRGVEGLEASVGIITLGTDLDVDAVGPVVRRAAEEVAARLS
CCHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA