| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715509
Identifier: 119715509
GI number: 119715509
Start: 1347644
End: 1348570
Strand: Direct
Name: 119715509
Synonym: Noca_1273
Alternate gene names: NA
Gene position: 1347644-1348570 (Clockwise)
Preceding gene: 119715508
Following gene: 119715510
Centisome position: 27.03
GC content: 72.82
Gene sequence:
>927_bases ATGACTGAGCACCCCGCGCCCGACCCGGCGCCCGACGTCGACGACGTACGCCGGTTCTGGGAGGGGCTCGGCCTGCCCGG CATCTTCGACGTGCACGTGCACTTCCTGCCGCCGAACATCCAGCGGGCCGTGTACGCCGTCTTCGACAGCGCCGGGCCGA AGATCGGCCGGGCGTGGCCGATCCGCTACCGCCAGGACCACGCCGACCGGGTCGAGCTCCTGCGCGCGATGGGAGTGCGC CGGTTCCCGACACTGCCCTACGCCCACAAGCCGGGCGTCGCGGGCTACCTCAACGACTGGGCGGCCGGGTTCAAGAAGGA CGTGCCGGAGTCGCTGTGGTCGGCGACGTTCTACCCCGAGGCCGAGGCGGCGTCGTACGTCGGCGCCGCGCTGGCCGCGG GCGTGGAGGTGTTCAAGGTGCACCTGCAGGTGGGGGAGTTCCACCTCGACGACCCGCTGCTCGACGAGGTGTGGGGCCAG CTCGAGGCCGCCGGCACGCCCGTGGTCGTGCACGCGGGCTCCGGCCCGGTCGGCAACGACTTCACCGGGCCGGCCTCGAC CGAGCGGCTGCTGCGGCGCTTCCCGCGACTGGCCCTCGTCCTGGCGCACATGGGCGCCCCGGAGTGCACGGAGTTCCTCG AGCTCGCCGAGGCCCACGAACGGGTCTTCCTCGACACCACGATGGTGTTCACCGACTTCTTCCCGCCCTACCCGCCCGAG CTGGTCCCCCGGCTGCGCGACCTGGGCCACCGGGTGCTGCTGGGCAGCGACTTCCCGACGATCCCGTACCCCTACGCCCA CCAGCTCGAGGGCCTGGCCCGGCTCGACCTCGGCGACGACTGGCTGCGCGCGGTGTGCTGGGGCAACGGCACGGCGCTGT TCGGTGCCGCGGGAATCGATGCGGCGCCGTCGGGGTTGACCACCTAG
Upstream 100 bases:
>100_bases GCCAAGGGCAAGAAGTCGTGGGACAAGCGGGCCGCGCTCGCCGAGCGGCAGGCCAACCGGGAGACCGAGCAGGCGGTCGG CCGCCGGCTCAAGGGCATGC
Downstream 100 bases:
>100_bases ACTGGAAGCACAACTCAAGAGGGGCTGATCGGTTTCGACTTGGGACGTTAGTTCCAGGGGAAGCGGGTCGAGAAGCCAGC GCCATCTCGTAAACGATCGC
Product: amidohydrolase 2
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Metal-Dependent Hydrolase; Amidase; TIM-Barrel Fold Metal-Dependent Hydrolase; Amidohydrolase Family 2 Protein
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MTEHPAPDPAPDVDDVRRFWEGLGLPGIFDVHVHFLPPNIQRAVYAVFDSAGPKIGRAWPIRYRQDHADRVELLRAMGVR RFPTLPYAHKPGVAGYLNDWAAGFKKDVPESLWSATFYPEAEAASYVGAALAAGVEVFKVHLQVGEFHLDDPLLDEVWGQ LEAAGTPVVVHAGSGPVGNDFTGPASTERLLRRFPRLALVLAHMGAPECTEFLELAEAHERVFLDTTMVFTDFFPPYPPE LVPRLRDLGHRVLLGSDFPTIPYPYAHQLEGLARLDLGDDWLRAVCWGNGTALFGAAGIDAAPSGLTT
Sequences:
>Translated_308_residues MTEHPAPDPAPDVDDVRRFWEGLGLPGIFDVHVHFLPPNIQRAVYAVFDSAGPKIGRAWPIRYRQDHADRVELLRAMGVR RFPTLPYAHKPGVAGYLNDWAAGFKKDVPESLWSATFYPEAEAASYVGAALAAGVEVFKVHLQVGEFHLDDPLLDEVWGQ LEAAGTPVVVHAGSGPVGNDFTGPASTERLLRRFPRLALVLAHMGAPECTEFLELAEAHERVFLDTTMVFTDFFPPYPPE LVPRLRDLGHRVLLGSDFPTIPYPYAHQLEGLARLDLGDDWLRAVCWGNGTALFGAAGIDAAPSGLTT >Mature_307_residues TEHPAPDPAPDVDDVRRFWEGLGLPGIFDVHVHFLPPNIQRAVYAVFDSAGPKIGRAWPIRYRQDHADRVELLRAMGVRR FPTLPYAHKPGVAGYLNDWAAGFKKDVPESLWSATFYPEAEAASYVGAALAAGVEVFKVHLQVGEFHLDDPLLDEVWGQL EAAGTPVVVHAGSGPVGNDFTGPASTERLLRRFPRLALVLAHMGAPECTEFLELAEAHERVFLDTTMVFTDFFPPYPPEL VPRLRDLGHRVLLGSDFPTIPYPYAHQLEGLARLDLGDDWLRAVCWGNGTALFGAAGIDAAPSGLTT
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33794; Mature: 33662
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEHPAPDPAPDVDDVRRFWEGLGLPGIFDVHVHFLPPNIQRAVYAVFDSAGPKIGRAWP CCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCC IRYRQDHADRVELLRAMGVRRFPTLPYAHKPGVAGYLNDWAAGFKKDVPESLWSATFYPE CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC AEAASYVGAALAAGVEVFKVHLQVGEFHLDDPLLDEVWGQLEAAGTPVVVHAGSGPVGND HHHHHHHHHHHHHHHHHHHEEHHHCCEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCCC FTGPASTERLLRRFPRLALVLAHMGAPECTEFLELAEAHERVFLDTTMVFTDFFPPYPPE CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LVPRLRDLGHRVLLGSDFPTIPYPYAHQLEGLARLDLGDDWLRAVCWGNGTALFGAAGID HHHHHHHCCCEEEECCCCCCCCCCHHHHHCCHHCCCCCHHHHHHHHCCCCCEEEECCCCC AAPSGLTT CCCCCCCC >Mature Secondary Structure TEHPAPDPAPDVDDVRRFWEGLGLPGIFDVHVHFLPPNIQRAVYAVFDSAGPKIGRAWP CCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCC IRYRQDHADRVELLRAMGVRRFPTLPYAHKPGVAGYLNDWAAGFKKDVPESLWSATFYPE CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC AEAASYVGAALAAGVEVFKVHLQVGEFHLDDPLLDEVWGQLEAAGTPVVVHAGSGPVGND HHHHHHHHHHHHHHHHHHHEEHHHCCEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCCC FTGPASTERLLRRFPRLALVLAHMGAPECTEFLELAEAHERVFLDTTMVFTDFFPPYPPE CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LVPRLRDLGHRVLLGSDFPTIPYPYAHQLEGLARLDLGDDWLRAVCWGNGTALFGAAGID HHHHHHHCCCEEEECCCCCCCCCCHHHHHCCHHCCCCCHHHHHHHHCCCCCEEEECCCCC AAPSGLTT CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA