| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715510
Identifier: 119715510
GI number: 119715510
Start: 1349218
End: 1349559
Strand: Direct
Name: 119715510
Synonym: Noca_1274
Alternate gene names: NA
Gene position: 1349218-1349559 (Clockwise)
Preceding gene: 119715509
Following gene: 119715511
Centisome position: 27.06
GC content: 73.1
Gene sequence:
>342_bases ATGCCTAAGTATCTCGACGAGCTCGACGTCGTGCTCCGCGCCCTCGCGGACCCCACGCGCCGGGCCGTCGTGGAGCGGCT CGCGAAGTCGCCGGCCGTCGTGTCCGAGCTCGCGGCGCCGTTCTCGATGGCGCTGCCCTCGCTCATGCAGCACCTGCGCA TCCTCGAGGACGCGGGCCTGGTCTGCTCGGAGAAGCACGGGCGGGTCCGCACCGTCAGCCTGCGGCCGGGCGCCCTCGAC GTGCTGCACCTGTGGTTGGGCGAGCAGCGCACCCCGGCCGAGCGTCAGGCCGACCGGCTCGCCATCCACCTGACCCGCAG CCCCGGAGGGAACCCGACATGA
Upstream 100 bases:
>100_bases TCGTACGTCGGGCGCCGCCCGTCGGGGAGGCGCCGGTCGCTGTGCCGCCCGACACACAAAGCGGTTGACGGCACCCATCC ATTGGTCAATAGTTAGGCAT
Downstream 100 bases:
>100_bases CCCGCGTCCGCATCGACCTCAACATCTCGTTGGACGGCTACGCGGCCGGCGAGCCGACCCCGGAGAACCCGATGGGGGAG GACTGGGAGCGCCTCACCGG
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator ArsR Family Protein; Transcription Regulator ArsR; ArsR Family Regulatory; Transcriptional Regulator Protein ArsR Family; Transcriptional Regulatory Protein; Transcriptional Regulatory ArsR Family; Transcriptional Regulator Arsr Family; ArsR Family Transcriptional Regulatory Protein; Transcriptional Regulator Protein; Arsr Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulatory Protein Asrr; Transcriptional Regulator MarR Family; Transcriptional Regulatory Protein ArsR Family; Transcriptional Regulator ArsR-Family; Xin-Antitoxin System Antitoxin Component ArsR Family; HTH Family Transcriptional Regulator
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MPKYLDELDVVLRALADPTRRAVVERLAKSPAVVSELAAPFSMALPSLMQHLRILEDAGLVCSEKHGRVRTVSLRPGALD VLHLWLGEQRTPAERQADRLAIHLTRSPGGNPT
Sequences:
>Translated_113_residues MPKYLDELDVVLRALADPTRRAVVERLAKSPAVVSELAAPFSMALPSLMQHLRILEDAGLVCSEKHGRVRTVSLRPGALD VLHLWLGEQRTPAERQADRLAIHLTRSPGGNPT >Mature_112_residues PKYLDELDVVLRALADPTRRAVVERLAKSPAVVSELAAPFSMALPSLMQHLRILEDAGLVCSEKHGRVRTVSLRPGALDV LHLWLGEQRTPAERQADRLAIHLTRSPGGNPT
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12422; Mature: 12290
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKYLDELDVVLRALADPTRRAVVERLAKSPAVVSELAAPFSMALPSLMQHLRILEDAGL CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCC VCSEKHGRVRTVSLRPGALDVLHLWLGEQRTPAERQADRLAIHLTRSPGGNPT EECCCCCCEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHEEEEEECCCCCCCC >Mature Secondary Structure PKYLDELDVVLRALADPTRRAVVERLAKSPAVVSELAAPFSMALPSLMQHLRILEDAGL CCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCC VCSEKHGRVRTVSLRPGALDVLHLWLGEQRTPAERQADRLAIHLTRSPGGNPT EECCCCCCEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA