| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715482
Identifier: 119715482
GI number: 119715482
Start: 1320587
End: 1321903
Strand: Direct
Name: 119715482
Synonym: Noca_1246
Alternate gene names: NA
Gene position: 1320587-1321903 (Clockwise)
Preceding gene: 119715481
Following gene: 119715483
Centisome position: 26.49
GC content: 80.71
Gene sequence:
>1317_bases GTGAGCGGCCCGCAGCGCGCGCGGCTGGACCGGGCGCTGGCCGGCGCCCACGAGGACGCGGTGACCTCGAGCGCGCGGGA GTGGGTCCGGTGCGTCGGCATCCTGCACGACATCGCGGCCGCCCTCGACGGCGCCTCGCCGGAGGTCAGACGAGAGATCG GCGGCCGGACCGGGCCCGCGATCGACGCCGCGTTCCAGCGGTCCAGCCAGGGCATGGTCCGGCGGGCCGACGACCTGGTC CGGGGCAGTACGGCGCTCCAGGCGGCGGCCGAGGCGATCGGCGCCGCGCGGGCCGAGCAGGAGCAGCTGCGGCACCAGCC GCTGACCGCGCCCGCGCCGTACGTCGCGGGCCCGGGTCCACGCACCGACGAGGACATCGCCAGGGAGGCCGCCGCGCGGC AGGCACAACGCGACTACGACCTCGCCTACGCCGACCAGGAGGCCCGGGCCCAGGCCCGCGCCGACCACCTGGACCGGGTG TTCGCCGCGTCCACCGCGACGATGAAGGACATCCACAAGGTGCCCGACCCCGAGCCGTCCGGCTCCGGCTCGGACACCTC CGGCGGGTCGGGGGCGGGGTCCGGCGGCGCCGTGCCGCACCCGGTCCCGGCGGGTGGCGGGAGCGGGCCCCGGGGCGACG GCCCGTCGTCGACCCGGCCGCCCGGCGGGTCCGGTGACGGCTCCGGCCACCACCATCCCGGCACCCACGGCACCCACGGC ACCCACGGCGTGCCGCCGCCCGCACCGGGTGACGTCGGCGCGCCCCAGGGCGGCAGCGCCGTCGACGTCCCCGGCCCGAC GCCCGTCGGAGCCCTCGGCGGCGCCGTACCGGTGGGCAGCCCCGGCGGCCTCGGTCTCGGCCTGGCCGGCGCCGCCACGG GCGGCCTCGGCGGCGGACCGCTCGGCACCGGCCTCGCGGCCGGTGGCATCCGCGGCGGGGTCGCCGGCCCCATCGTCACC GCCCCCGGGACCACGGCCGGCGGCGTCCGCGGCATCGGCGCCACCTCGCGTGCGGGGGTGACCGGTGCCCTCGGGCGACC CGGCGGGGTTGCTGCGGTCGGGTCCGGCCCGGGCAGCACCGGGCGCGGGACCGCGGCCCGCTCGAGCGGGGTCGCCTCCG GACGCGGCACGGGCCGGGGCGCGGGCGGCCGTGGCGCTGCCGGTGCACGCGGTTCGGGCGGTCGTGGCACGGGCGCGGCG GCCGGTGCCCGCAGCGGGCGCAAGCAGGACGACCGACACGGCGGGCGCGACCCGTTCGGCACCGTCGCCGAGGACTGGAT CGACGACGAGGAGGTCGCTCCGGGCGTGCTCGACTGA
Upstream 100 bases:
>100_bases AGCAGGCGACCGCGTGCGTCGCGGCGACCAGCTTCGCCACGAACGACGCCTGCGCGCTGCCCACCTCGGGAGCCACGCGG CCCGCGGACGGGGTGGGCGG
Downstream 100 bases:
>100_bases GGTCGTCCGGCGGGTCCCGGGACTCCGTTCCCGCGACGTCCCGGGACGGGCGGGCAACGGCCCGCCGACGTGGGACCAAC GACCCGGGGCAGGCCCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MSGPQRARLDRALAGAHEDAVTSSAREWVRCVGILHDIAAALDGASPEVRREIGGRTGPAIDAAFQRSSQGMVRRADDLV RGSTALQAAAEAIGAARAEQEQLRHQPLTAPAPYVAGPGPRTDEDIAREAAARQAQRDYDLAYADQEARAQARADHLDRV FAASTATMKDIHKVPDPEPSGSGSDTSGGSGAGSGGAVPHPVPAGGGSGPRGDGPSSTRPPGGSGDGSGHHHPGTHGTHG THGVPPPAPGDVGAPQGGSAVDVPGPTPVGALGGAVPVGSPGGLGLGLAGAATGGLGGGPLGTGLAAGGIRGGVAGPIVT APGTTAGGVRGIGATSRAGVTGALGRPGGVAAVGSGPGSTGRGTAARSSGVASGRGTGRGAGGRGAAGARGSGGRGTGAA AGARSGRKQDDRHGGRDPFGTVAEDWIDDEEVAPGVLD
Sequences:
>Translated_438_residues MSGPQRARLDRALAGAHEDAVTSSAREWVRCVGILHDIAAALDGASPEVRREIGGRTGPAIDAAFQRSSQGMVRRADDLV RGSTALQAAAEAIGAARAEQEQLRHQPLTAPAPYVAGPGPRTDEDIAREAAARQAQRDYDLAYADQEARAQARADHLDRV FAASTATMKDIHKVPDPEPSGSGSDTSGGSGAGSGGAVPHPVPAGGGSGPRGDGPSSTRPPGGSGDGSGHHHPGTHGTHG THGVPPPAPGDVGAPQGGSAVDVPGPTPVGALGGAVPVGSPGGLGLGLAGAATGGLGGGPLGTGLAAGGIRGGVAGPIVT APGTTAGGVRGIGATSRAGVTGALGRPGGVAAVGSGPGSTGRGTAARSSGVASGRGTGRGAGGRGAAGARGSGGRGTGAA AGARSGRKQDDRHGGRDPFGTVAEDWIDDEEVAPGVLD >Mature_437_residues SGPQRARLDRALAGAHEDAVTSSAREWVRCVGILHDIAAALDGASPEVRREIGGRTGPAIDAAFQRSSQGMVRRADDLVR GSTALQAAAEAIGAARAEQEQLRHQPLTAPAPYVAGPGPRTDEDIAREAAARQAQRDYDLAYADQEARAQARADHLDRVF AASTATMKDIHKVPDPEPSGSGSDTSGGSGAGSGGAVPHPVPAGGGSGPRGDGPSSTRPPGGSGDGSGHHHPGTHGTHGT HGVPPPAPGDVGAPQGGSAVDVPGPTPVGALGGAVPVGSPGGLGLGLAGAATGGLGGGPLGTGLAAGGIRGGVAGPIVTA PGTTAGGVRGIGATSRAGVTGALGRPGGVAAVGSGPGSTGRGTAARSSGVASGRGTGRGAGGRGAAGARGSGGRGTGAAA GARSGRKQDDRHGGRDPFGTVAEDWIDDEEVAPGVLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42002; Mature: 41871
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPQRARLDRALAGAHEDAVTSSAREWVRCVGILHDIAAALDGASPEVRREIGGRTGPA CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCH IDAAFQRSSQGMVRRADDLVRGSTALQAAAEAIGAARAEQEQLRHQPLTAPAPYVAGPGP HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RTDEDIAREAAARQAQRDYDLAYADQEARAQARADHLDRVFAASTATMKDIHKVPDPEPS CCHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GSGSDTSGGSGAGSGGAVPHPVPAGGGSGPRGDGPSSTRPPGGSGDGSGHHHPGTHGTHG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC THGVPPPAPGDVGAPQGGSAVDVPGPTPVGALGGAVPVGSPGGLGLGLAGAATGGLGGGP CCCCCCCCCCCCCCCCCCCEECCCCCCCHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCC LGTGLAAGGIRGGVAGPIVTAPGTTAGGVRGIGATSRAGVTGALGRPGGVAAVGSGPGST HHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC GRGTAARSSGVASGRGTGRGAGGRGAAGARGSGGRGTGAAAGARSGRKQDDRHGGRDPFG CCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHCCCCCCCH TVAEDWIDDEEVAPGVLD HHHHHHCCHHHCCCCCCC >Mature Secondary Structure SGPQRARLDRALAGAHEDAVTSSAREWVRCVGILHDIAAALDGASPEVRREIGGRTGPA CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCH IDAAFQRSSQGMVRRADDLVRGSTALQAAAEAIGAARAEQEQLRHQPLTAPAPYVAGPGP HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RTDEDIAREAAARQAQRDYDLAYADQEARAQARADHLDRVFAASTATMKDIHKVPDPEPS CCHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GSGSDTSGGSGAGSGGAVPHPVPAGGGSGPRGDGPSSTRPPGGSGDGSGHHHPGTHGTHG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC THGVPPPAPGDVGAPQGGSAVDVPGPTPVGALGGAVPVGSPGGLGLGLAGAATGGLGGGP CCCCCCCCCCCCCCCCCCCEECCCCCCCHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCC LGTGLAAGGIRGGVAGPIVTAPGTTAGGVRGIGATSRAGVTGALGRPGGVAAVGSGPGST HHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC GRGTAARSSGVASGRGTGRGAGGRGAAGARGSGGRGTGAAAGARSGRKQDDRHGGRDPFG CCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHCCCCCCCH TVAEDWIDDEEVAPGVLD HHHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA