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The map label for this gene is ydhO [C]

Identifier: 119715479

GI number: 119715479

Start: 1318861

End: 1319370

Strand: Direct

Name: ydhO [C]

Synonym: Noca_1243

Alternate gene names: 119715479

Gene position: 1318861-1319370 (Clockwise)

Preceding gene: 119715478

Following gene: 119715481

Centisome position: 26.45

GC content: 71.37

Gene sequence:

>510_bases
ATGACACTCATCCTGCGCGCGCTCGCGAGCGCCGCCCTCGTCGTCGGCCTGCTGACCACGGCGCCCGCCGTCCCTGACGC
ACACGGCGCGACCGCGGCCCGGGAGACCAAGCACCGGACCGCTCGCCAGGCCACGGCTCGCAAGATCGGCCACGCGATCA
GCATCGCGGTCAACCAGAAGGGCGACCCCTACCGGTCCGGAGCCGCCGGCCCGCACGCGTTCGACTGCTCCGGGCTGACC
TTCTTCAGCTACCGCAAGGCCGGCTTCAAACACCTGCCCCGGACGTCCTCCGCCCAGGCCCACTTCGCGAAGCGGATCAA
GCGCGGCGCGATGCGTCGCGGCGACCTGATCTTCTTCTACGACGGCGGCGGCGTCTACCACGTCGGCGTGTACGCCGGCT
TCAACCACGGGCACCGCTGGGTGCTGCACTCGCCGTACTCCGGCACCCGCGTGCGCACCGACAAGCTGTGGACCGACCGG
TGGTTCGCCGGCACCCTGCGCTACCGCTGA

Upstream 100 bases:

>100_bases
CGCGCGGACCACTCGGGGTGAAGCCACCAGCCGGTGGCCGGGCACCTTCCACGCCCGAACCCGACAGCTCACCTCACAGG
CGTGGGAAGGAACCACGCAC

Downstream 100 bases:

>100_bases
GACCCGAGCCGCCGGCTCACTTCCACTCGAAGGTCGCCAGCACCGAGTCGACGATCCGCTGTCGCTCGGCCGGCGGGATC
CGGGCGTAGAGCTGGAACCG

Product: NLP/P60 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MTLILRALASAALVVGLLTTAPAVPDAHGATAARETKHRTARQATARKIGHAISIAVNQKGDPYRSGAAGPHAFDCSGLT
FFSYRKAGFKHLPRTSSAQAHFAKRIKRGAMRRGDLIFFYDGGGVYHVGVYAGFNHGHRWVLHSPYSGTRVRTDKLWTDR
WFAGTLRYR

Sequences:

>Translated_169_residues
MTLILRALASAALVVGLLTTAPAVPDAHGATAARETKHRTARQATARKIGHAISIAVNQKGDPYRSGAAGPHAFDCSGLT
FFSYRKAGFKHLPRTSSAQAHFAKRIKRGAMRRGDLIFFYDGGGVYHVGVYAGFNHGHRWVLHSPYSGTRVRTDKLWTDR
WFAGTLRYR
>Mature_168_residues
TLILRALASAALVVGLLTTAPAVPDAHGATAARETKHRTARQATARKIGHAISIAVNQKGDPYRSGAAGPHAFDCSGLTF
FSYRKAGFKHLPRTSSAQAHFAKRIKRGAMRRGDLIFFYDGGGVYHVGVYAGFNHGHRWVLHSPYSGTRVRTDKLWTDRW
FAGTLRYR

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=123, Percent_Identity=34.9593495934959, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1786421, Length=120, Percent_Identity=35, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 18578; Mature: 18447

Theoretical pI: Translated: 11.64; Mature: 11.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLILRALASAALVVGLLTTAPAVPDAHGATAARETKHRTARQATARKIGHAISIAVNQK
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCC
GDPYRSGAAGPHAFDCSGLTFFSYRKAGFKHLPRTSSAQAHFAKRIKRGAMRRGDLIFFY
CCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEE
DGGGVYHVGVYAGFNHGHRWVLHSPYSGTRVRTDKLWTDRWFAGTLRYR
CCCCEEEEEEEEECCCCCEEEEECCCCCCEEEECCCCCCCEEEEEECCC
>Mature Secondary Structure 
TLILRALASAALVVGLLTTAPAVPDAHGATAARETKHRTARQATARKIGHAISIAVNQK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCC
GDPYRSGAAGPHAFDCSGLTFFSYRKAGFKHLPRTSSAQAHFAKRIKRGAMRRGDLIFFY
CCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEE
DGGGVYHVGVYAGFNHGHRWVLHSPYSGTRVRTDKLWTDRWFAGTLRYR
CCCCEEEEEEEEECCCCCEEEEECCCCCCEEEECCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA