| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715451
Identifier: 119715451
GI number: 119715451
Start: 1287779
End: 1289092
Strand: Direct
Name: 119715451
Synonym: Noca_1215
Alternate gene names: NA
Gene position: 1287779-1289092 (Clockwise)
Preceding gene: 119715450
Following gene: 119715454
Centisome position: 25.83
GC content: 77.02
Gene sequence:
>1314_bases GTGGCCGACCGTGCGCTCGTCCTGATCGTCGCCTCGGGGGCGGCGTGGGAGCCGGCCGCCCTGCGTCGGCTCGGCGACCA CCCCGGCATCGTCGTGCTCAAGCGCTGCGTCGACATCGACGACCTGCTCGCGGCGGCGACGGCGGGACAGGCCGACGTCG CCGTGCTCGGCCTGGATGCCCCGGGTCTGGACCGCAGCGCGGTCGACCTGCTCCGCAAGCACGGCGTCCGCCCGGTCGCC ATCGCCCCCGGCGGCGTCACCCTCGACGGCGGGCGGCTCCGGGCCGCGCGCATCGGCGTGCACCGGGTCGTCACCGACGA CGACCTCGACCGCCTGGTCGAGACCGTCCTCGCCGAGGAGTCCCCGGCCACCGCGGTCCGGCCGCCGGCCCCGCTCGGAC CGCCACCTGCCGGACCCCCGAGTCCGCCTCCGTCGGGACCGGCACCCGGTACGCCGGCGCTACCCGGCCGGGTGATCGCC GTCTGGGGCCCGGCCGGTGCACCGGGGCGGACCACCGTCGCGACCGCCCTGGCGGCCGAGACCGCCCGCCGGCAACGCCG TACCGTCCTGGTCGACGCCGATCCGTACGGCGGCGCCGTCGCCCAGCAGCTCGGCATCCTCGACGAGGTCTCCGGCCTGC TCTCCGCGGCTCGGCTCGCTTCCTCGGGGCAGCTCGAGGAGCGGTTCGCCTCGGTCCAGCGCGGCATCGACCCCCACCTC AGCGTCGTCACCGGCCTGCCCCGGGGTGACCGGTGGGTCGAGGTGCGGGTCGGCGCGATCGAGCACCTGCTGGAGGTCGG CCGTGAGCAGGCCGAGGTGGTCGTCGACACCGGCTTCAGCCTGGAGGAGGACGCCGCGCCGGACTTCGGCACCCGCCCGG CCCGCAACCAGATGACGCTGGGCGCGCTCGAGGTGGCCGACGAGGTGGTCGTCGTCGGTGCAGCGGACCCGGTCGGCCTG TCCCGGCTGGCGCGCGGCCTGGTCGAGCTGCGCGACCTGACGGCCGGACGCCCGGTCCACGTCGTCGTCAACCGGATGCG CGGGACGCTCGGCTGGTCCGAGCGCGACATCGCCGGGATGGTCCACGGCTTCGCCCGGGTCGCGGGCCTGCACTTCCTCC CCGAGGACCAGGTGGCCGTCGACCGGGCACTCGTGAGCGGCCGCACCCTCGTCGAGGTGGGCGACTCATCGCTCGGCCGG GCGGTCGCGCGGCTCGTGGACGCCCTGTCGCCGCGGGGCTCGACCGGCGCACCGGCGGACCTCCCGGCGCCCGGTGCTCG GCGGGCGCAGGCTCAGGCCGCGAACAGCAGGTAG
Upstream 100 bases:
>100_bases GCTGGTGCTCGCCGTACCGCAGGCCGATGCGGCCGCCTTCCTCGACCAGCTGGGCCGCACCGAGGCGCCGGTCCTCACCG TGGTTCGCCGAGGCTGACCC
Downstream 100 bases:
>100_bases AGCCCGCCGACGGTGAACGCCACCATCGCGAACAGCAGCGGCAGCTGACCGGTCAGCTGGTGCCGCGGCGGCAGGATCTT GATCGCCCGGTCGTGGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Flp Pilus Assembly Protein ATPase CpaE; ATPase Involved In Chromosome Partitioning-Like Protein; ATPases Involved In Chromosome Partitioning-Like; Chromosome Partitioning ATPase-Like Protein; Chromosome Partitioning ATPase Protein-Like Protein
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MADRALVLIVASGAAWEPAALRRLGDHPGIVVLKRCVDIDDLLAAATAGQADVAVLGLDAPGLDRSAVDLLRKHGVRPVA IAPGGVTLDGGRLRAARIGVHRVVTDDDLDRLVETVLAEESPATAVRPPAPLGPPPAGPPSPPPSGPAPGTPALPGRVIA VWGPAGAPGRTTVATALAAETARRQRRTVLVDADPYGGAVAQQLGILDEVSGLLSAARLASSGQLEERFASVQRGIDPHL SVVTGLPRGDRWVEVRVGAIEHLLEVGREQAEVVVDTGFSLEEDAAPDFGTRPARNQMTLGALEVADEVVVVGAADPVGL SRLARGLVELRDLTAGRPVHVVVNRMRGTLGWSERDIAGMVHGFARVAGLHFLPEDQVAVDRALVSGRTLVEVGDSSLGR AVARLVDALSPRGSTGAPADLPAPGARRAQAQAANSR
Sequences:
>Translated_437_residues MADRALVLIVASGAAWEPAALRRLGDHPGIVVLKRCVDIDDLLAAATAGQADVAVLGLDAPGLDRSAVDLLRKHGVRPVA IAPGGVTLDGGRLRAARIGVHRVVTDDDLDRLVETVLAEESPATAVRPPAPLGPPPAGPPSPPPSGPAPGTPALPGRVIA VWGPAGAPGRTTVATALAAETARRQRRTVLVDADPYGGAVAQQLGILDEVSGLLSAARLASSGQLEERFASVQRGIDPHL SVVTGLPRGDRWVEVRVGAIEHLLEVGREQAEVVVDTGFSLEEDAAPDFGTRPARNQMTLGALEVADEVVVVGAADPVGL SRLARGLVELRDLTAGRPVHVVVNRMRGTLGWSERDIAGMVHGFARVAGLHFLPEDQVAVDRALVSGRTLVEVGDSSLGR AVARLVDALSPRGSTGAPADLPAPGARRAQAQAANSR >Mature_436_residues ADRALVLIVASGAAWEPAALRRLGDHPGIVVLKRCVDIDDLLAAATAGQADVAVLGLDAPGLDRSAVDLLRKHGVRPVAI APGGVTLDGGRLRAARIGVHRVVTDDDLDRLVETVLAEESPATAVRPPAPLGPPPAGPPSPPPSGPAPGTPALPGRVIAV WGPAGAPGRTTVATALAAETARRQRRTVLVDADPYGGAVAQQLGILDEVSGLLSAARLASSGQLEERFASVQRGIDPHLS VVTGLPRGDRWVEVRVGAIEHLLEVGREQAEVVVDTGFSLEEDAAPDFGTRPARNQMTLGALEVADEVVVVGAADPVGLS RLARGLVELRDLTAGRPVHVVVNRMRGTLGWSERDIAGMVHGFARVAGLHFLPEDQVAVDRALVSGRTLVEVGDSSLGRA VARLVDALSPRGSTGAPADLPAPGARRAQAQAANSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45097; Mature: 44966
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRALVLIVASGAAWEPAALRRLGDHPGIVVLKRCVDIDDLLAAATAGQADVAVLGLDA CCCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHCCHHHHHHHHCCCCCCEEEEECCC PGLDRSAVDLLRKHGVRPVAIAPGGVTLDGGRLRAARIGVHRVVTDDDLDRLVETVLAEE CCCCHHHHHHHHHCCCCEEEECCCCEEECCCEEEEEECCEEEEECCHHHHHHHHHHHHCC SPATAVRPPAPLGPPPAGPPSPPPSGPAPGTPALPGRVIAVWGPAGAPGRTTVATALAAE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH TARRQRRTVLVDADPYGGAVAQQLGILDEVSGLLSAARLASSGQLEERFASVQRGIDPHL HHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCH SVVTGLPRGDRWVEVRVGAIEHLLEVGREQAEVVVDTGFSLEEDAAPDFGTRPARNQMTL HHHCCCCCCCEEEEEEHHHHHHHHHHCCHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCH GALEVADEVVVVGAADPVGLSRLARGLVELRDLTAGRPVHVVVNRMRGTLGWSERDIAGM HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHH VHGFARVAGLHFLPEDQVAVDRALVSGRTLVEVGDSSLGRAVARLVDALSPRGSTGAPAD HHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCC LPAPGARRAQAQAANSR CCCCCCHHHHHHHCCCC >Mature Secondary Structure ADRALVLIVASGAAWEPAALRRLGDHPGIVVLKRCVDIDDLLAAATAGQADVAVLGLDA CCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHCCHHHHHHHHCCCCCCEEEEECCC PGLDRSAVDLLRKHGVRPVAIAPGGVTLDGGRLRAARIGVHRVVTDDDLDRLVETVLAEE CCCCHHHHHHHHHCCCCEEEECCCCEEECCCEEEEEECCEEEEECCHHHHHHHHHHHHCC SPATAVRPPAPLGPPPAGPPSPPPSGPAPGTPALPGRVIAVWGPAGAPGRTTVATALAAE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH TARRQRRTVLVDADPYGGAVAQQLGILDEVSGLLSAARLASSGQLEERFASVQRGIDPHL HHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCH SVVTGLPRGDRWVEVRVGAIEHLLEVGREQAEVVVDTGFSLEEDAAPDFGTRPARNQMTL HHHCCCCCCCEEEEEEHHHHHHHHHHCCHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCH GALEVADEVVVVGAADPVGLSRLARGLVELRDLTAGRPVHVVVNRMRGTLGWSERDIAGM HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHH VHGFARVAGLHFLPEDQVAVDRALVSGRTLVEVGDSSLGRAVARLVDALSPRGSTGAPAD HHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCC LPAPGARRAQAQAANSR CCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA