| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715450
Identifier: 119715450
GI number: 119715450
Start: 1287101
End: 1287775
Strand: Direct
Name: 119715450
Synonym: Noca_1214
Alternate gene names: NA
Gene position: 1287101-1287775 (Clockwise)
Preceding gene: 119715448
Following gene: 119715451
Centisome position: 25.81
GC content: 76.89
Gene sequence:
>675_bases GTGACTCGGCGGCCGGCGCAGCGTCCGGAGATCGGGGGAGTCGCCCCGGTCCCGCCGGCGACGCGCGCGACCCGGGCCGG TTGGCGCGATCCGCGGCTCTGGGTCGGGGTCCTGATCGTCGCCGTCTCCGTCGTCGCGGGCGCGCGGCTGCTCGCCGCCG CCGACGACACGGTGTCGGTGTGGGCGGTCTCGGGCGATGCGGGCCCGGGGGCGGAGCTGGACGCCGGCGACCTGGTCGCC CACCGGGTTCGGTTCGCCGACGCGGAGGACCTCGGGCGCTACTTCACCCTCGACGACGAGCTGCCCGCCGACCTGCGGCT GGTCCGTGGCGTGACGGCAGGGGAACTGCTGCCACGATCCGCGCTCGGCGCCGCCGACGACGGTGCGGACACGGTCGAGC TGCCGGTGGCGGTCGACGTCGAGCTGGTGCCGCCCTCGGTGCGCGCCGGGTCGGTCGTCGACGTCTACCTCGTCGGCCGC GGCAACCGCGACCACACGGGGCCGGCGCTGGCCGGCGCGACGGTGGTCGACGCACCCGGCATCGACACGACGTTCGGGTC GGCGAGCGGGCACCGCCAGCTGGTGCTCGCCGTACCGCAGGCCGATGCGGCCGCCTTCCTCGACCAGCTGGGCCGCACCG AGGCGCCGGTCCTCACCGTGGTTCGCCGAGGCTGA
Upstream 100 bases:
>100_bases GCCGGCCGGGCCGGTTGTGGACGACCGGCCGGACGACCGGCCGGACGACGGGTTGTGGAGGACGGGTTTCGATGCGCCGG AGTGTGGTGATGATGAGCGG
Downstream 100 bases:
>100_bases CCCGTGGCCGACCGTGCGCTCGTCCTGATCGTCGCCTCGGGGGCGGCGTGGGAGCCGGCCGCCCTGCGTCGGCTCGGCGA CCACCCCGGCATCGTCGTGC
Product: putative signal peptide
Products: NA
Alternate protein names: SAF Domain-Containing Protein
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MTRRPAQRPEIGGVAPVPPATRATRAGWRDPRLWVGVLIVAVSVVAGARLLAAADDTVSVWAVSGDAGPGAELDAGDLVA HRVRFADAEDLGRYFTLDDELPADLRLVRGVTAGELLPRSALGAADDGADTVELPVAVDVELVPPSVRAGSVVDVYLVGR GNRDHTGPALAGATVVDAPGIDTTFGSASGHRQLVLAVPQADAAAFLDQLGRTEAPVLTVVRRG
Sequences:
>Translated_224_residues MTRRPAQRPEIGGVAPVPPATRATRAGWRDPRLWVGVLIVAVSVVAGARLLAAADDTVSVWAVSGDAGPGAELDAGDLVA HRVRFADAEDLGRYFTLDDELPADLRLVRGVTAGELLPRSALGAADDGADTVELPVAVDVELVPPSVRAGSVVDVYLVGR GNRDHTGPALAGATVVDAPGIDTTFGSASGHRQLVLAVPQADAAAFLDQLGRTEAPVLTVVRRG >Mature_223_residues TRRPAQRPEIGGVAPVPPATRATRAGWRDPRLWVGVLIVAVSVVAGARLLAAADDTVSVWAVSGDAGPGAELDAGDLVAH RVRFADAEDLGRYFTLDDELPADLRLVRGVTAGELLPRSALGAADDGADTVELPVAVDVELVPPSVRAGSVVDVYLVGRG NRDHTGPALAGATVVDAPGIDTTFGSASGHRQLVLAVPQADAAAFLDQLGRTEAPVLTVVRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23069; Mature: 22938
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRPAQRPEIGGVAPVPPATRATRAGWRDPRLWVGVLIVAVSVVAGARLLAAADDTVSV CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEE WAVSGDAGPGAELDAGDLVAHRVRFADAEDLGRYFTLDDELPADLRLVRGVTAGELLPRS EEEECCCCCCCCCCHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHCCCCHHHHCCHH ALGAADDGADTVELPVAVDVELVPPSVRAGSVVDVYLVGRGNRDHTGPALAGATVVDAPG HCCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCHHCCCEEEECCC IDTTFGSASGHRQLVLAVPQADAAAFLDQLGRTEAPVLTVVRRG CCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEECC >Mature Secondary Structure TRRPAQRPEIGGVAPVPPATRATRAGWRDPRLWVGVLIVAVSVVAGARLLAAADDTVSV CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEE WAVSGDAGPGAELDAGDLVAHRVRFADAEDLGRYFTLDDELPADLRLVRGVTAGELLPRS EEEECCCCCCCCCCHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHCCCCHHHHCCHH ALGAADDGADTVELPVAVDVELVPPSVRAGSVVDVYLVGRGNRDHTGPALAGATVVDAPG HCCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCHHCCCEEEECCC IDTTFGSASGHRQLVLAVPQADAAAFLDQLGRTEAPVLTVVRRG CCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA