| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715399
Identifier: 119715399
GI number: 119715399
Start: 1234886
End: 1235731
Strand: Direct
Name: 119715399
Synonym: Noca_1162
Alternate gene names: NA
Gene position: 1234886-1235731 (Clockwise)
Preceding gene: 119715398
Following gene: 119715403
Centisome position: 24.77
GC content: 71.63
Gene sequence:
>846_bases ATGCGACTGCTGCTCGGTGCCCTGCTCGTCTCGCTCGTCGCGGCCCTCGGGGTGTCGGCGCCCGCCGGCGCGGACGGCGT ACCGCTCCCGACCAACCCGTTCGGTGACCCGACCGGAGCCAATGACTGGTCGTGCGAGCCGGCGACCCAGCGGCCGCAGC CGGTGATCATCGTGCACGGCACCTTCGGCGACAAGAAGAGCCTGCTCGACGACCTGTCCGCGGCGATGGTGGCCGACGGC TTCTGCGTGTACTCCTTCGACTACGGCAACCGCGGCACGGGTGACATCCCGACCTCGGCCAAGCAGCTCAGCGCGTTCAC TGCGAAGGTCCTCGACGCGACCGGCGCCGACCGGGTCTCGATGGTCGGCCACTCCCAGGGCGGGATGATGCCGCGCTACT ACATCAAGTTCCTCGGCGGCGCGTCGGTCGTCGACGACCTCGTCGGCCTCTCGCCGTCCAACCACGGCACCACGATCGTC GCCGACCCCTCGAACCCGCTCACCGGTGGCCTGTGCCCTGCCTGCAACCAGCAGGCCGCCGGCTCGGACTTCCTGACCCG GCTCAATGCCGGCGACGAGACGCCCGGCCGGGTCAGCTACACCCAGATCAGCACCAGGCACGACGAGGTGGTCGTCCCCT ACACCTCGGCGTTCCTGGCCGCCGGCCCGCGCACGACCAACGTCACCATCCAGGACTCCTGCCCGGCCGACACCGCCGAG CACGTGTTCATCCCGATGAGCCGGACCGCGATCGCCTGGGTGCTGAACGCGCTCACCCGGCCCGGGCCCGCCGACCCGGC GTACCGCCCCACGTGCGGTGCCACCGGCCTCCCGGGCGCCCCCTGA
Upstream 100 bases:
>100_bases GCAAGAAGCCCAAGCAGCGAGGTGACTGAGGCGACACGCCCGCCGGTTCTGGCTGCCAGGTCGGCCGTGACCGGGGCCGC CGCTGGTCGTTTGGCCAGAC
Downstream 100 bases:
>100_bases CCGACCGCCCGCTGACCGGGGGCGGTTTCCCCGGTTCACCGGGGATGTTGGAACTTCTGGCCCGAAGTTTCGGCCCAACA GTTCCGGTTTCCCCGGTTCA
Product: lipase, class 2
Products: NA
Alternate protein names: Triacylglycerol Lipase; Secreted Lipase; PGAP1 Family Protein; Acetyltransferase; Alpha/Beta Hydrolase Fold-Like Protein; Lipase Superfamily
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MRLLLGALLVSLVAALGVSAPAGADGVPLPTNPFGDPTGANDWSCEPATQRPQPVIIVHGTFGDKKSLLDDLSAAMVADG FCVYSFDYGNRGTGDIPTSAKQLSAFTAKVLDATGADRVSMVGHSQGGMMPRYYIKFLGGASVVDDLVGLSPSNHGTTIV ADPSNPLTGGLCPACNQQAAGSDFLTRLNAGDETPGRVSYTQISTRHDEVVVPYTSAFLAAGPRTTNVTIQDSCPADTAE HVFIPMSRTAIAWVLNALTRPGPADPAYRPTCGATGLPGAP
Sequences:
>Translated_281_residues MRLLLGALLVSLVAALGVSAPAGADGVPLPTNPFGDPTGANDWSCEPATQRPQPVIIVHGTFGDKKSLLDDLSAAMVADG FCVYSFDYGNRGTGDIPTSAKQLSAFTAKVLDATGADRVSMVGHSQGGMMPRYYIKFLGGASVVDDLVGLSPSNHGTTIV ADPSNPLTGGLCPACNQQAAGSDFLTRLNAGDETPGRVSYTQISTRHDEVVVPYTSAFLAAGPRTTNVTIQDSCPADTAE HVFIPMSRTAIAWVLNALTRPGPADPAYRPTCGATGLPGAP >Mature_281_residues MRLLLGALLVSLVAALGVSAPAGADGVPLPTNPFGDPTGANDWSCEPATQRPQPVIIVHGTFGDKKSLLDDLSAAMVADG FCVYSFDYGNRGTGDIPTSAKQLSAFTAKVLDATGADRVSMVGHSQGGMMPRYYIKFLGGASVVDDLVGLSPSNHGTTIV ADPSNPLTGGLCPACNQQAAGSDFLTRLNAGDETPGRVSYTQISTRHDEVVVPYTSAFLAAGPRTTNVTIQDSCPADTAE HVFIPMSRTAIAWVLNALTRPGPADPAYRPTCGATGLPGAP
Specific function: Unknown
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28974; Mature: 28974
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLLGALLVSLVAALGVSAPAGADGVPLPTNPFGDPTGANDWSCEPATQRPQPVIIVHG CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC TFGDKKSLLDDLSAAMVADGFCVYSFDYGNRGTGDIPTSAKQLSAFTAKVLDATGADRVS CCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEE MVGHSQGGMMPRYYIKFLGGASVVDDLVGLSPSNHGTTIVADPSNPLTGGLCPACNQQAA EEECCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC GSDFLTRLNAGDETPGRVSYTQISTRHDEVVVPYTSAFLAAGPRTTNVTIQDSCPADTAE CHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEHHHHHHCCCCCCEEEECCCCCCCCCC HVFIPMSRTAIAWVLNALTRPGPADPAYRPTCGATGLPGAP EEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLLLGALLVSLVAALGVSAPAGADGVPLPTNPFGDPTGANDWSCEPATQRPQPVIIVHG CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC TFGDKKSLLDDLSAAMVADGFCVYSFDYGNRGTGDIPTSAKQLSAFTAKVLDATGADRVS CCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEE MVGHSQGGMMPRYYIKFLGGASVVDDLVGLSPSNHGTTIVADPSNPLTGGLCPACNQQAA EEECCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC GSDFLTRLNAGDETPGRVSYTQISTRHDEVVVPYTSAFLAAGPRTTNVTIQDSCPADTAE CHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEHHHHHHCCCCCCEEEECCCCCCCCCC HVFIPMSRTAIAWVLNALTRPGPADPAYRPTCGATGLPGAP EEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA