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The map label for this gene is yoaR [H]

Identifier: 119715398

GI number: 119715398

Start: 1233072

End: 1234814

Strand: Direct

Name: yoaR [H]

Synonym: Noca_1161

Alternate gene names: 119715398

Gene position: 1233072-1234814 (Clockwise)

Preceding gene: 119715396

Following gene: 119715399

Centisome position: 24.73

GC content: 70.74

Gene sequence:

>1743_bases
GTGAATCAGCAGCCGACCGTGCCCGCCCGGGAGAAGGAGGGCGGCAAGGTCGTCCTGCTGATGCTCGCCGGGCTCGTCCT
GCTGGCAGGAGCGGCGTACGGCGCGCTGTATCTCGCCGCCGGCGACAAGGTGCCGCGGGGCACCACGGTGGCCGGTGTCG
ACATCGGCGGCCGGACCCCGGCCGACGCCGAGGAGGTGCTCCGCACCGGGCTCGCCGACCGGGTGGACCGGCCGATCACG
GTGGCCGCCGAGGGGGCGCGGAGCACCCTCGACCCGGGCGAGGCGGGCCTCACCGTCGACTACGCCGCATCGGTGGCCGA
GGCCGGCGGCGGCCGCAGCTGGAGCCCCGGGCGGCTGTGGGACTACTGGACCGGCGGCGACGACCTCGACCCGGTCCTCG
ACGTGGACGACGCGGCCTTCGACGCCGCGCTCGACAAGCTCGGGGAGGACCTCGGCACCCCGCCGGTCGAGGGCGACGTG
AAGTTCCGCGACGGCAAGGTCGTCGTCACCGACCCGGCCACCGGCGAGGAGATCCACCCCGAGGCGGCCCGACTCGCGAT
CACCACGGCGTACATCGCCGAGGACGCCACCGACGTCGAGCTCGAGCTGCGCCCGGCCGACCCCGAGGTGGACGCCGCCG
ACCTCCAGGAGGCGCTGGAGGCGTTCGCCAACCCGGCGATGTCCGGCCCGGTGACGCTGGTCTTCGGCGACTCGCCGGTG
CGGCTCGACCCGGCCGACTTCGGCAAGGTCCTCGGGATGGGCGCCGAGGACGGCGAGCTGGTGCCGGACCTGCGGGAGAA
GAAGCTCGTCAAGCTGGTCGACCGCGGGATCAGCCAGGACGGTGCGCCGGTTGACGCGACCGTCGCCCTGGTGGACGGCA
AGCCCAAGGTGATCCCCGCCAAGCCCGGCGTCACTTACAAGCCCTCCGACGTCAGCGACGCCTTCCTCGAGCTGGTCGCC
CGCGAGGGCGACCGCGAGATGAAGGTCCCCTCGACGGTCGCCGAGCCGGACTTCACCACCAAGGATGCCCGGGCGCTGAA
GATCCGCGAGCAGGTCTCCACGTTCACGACGTACTACCCCTACGCGGAGTACCGCAACATCAACATCGGACGCGCCGCCG
AGCTGATCGACGGCACCGTCCTGAAGCCCGGCGACGAGTTCTCGCTCAACGGCATCGTCGGCGAGCGCACCCGCGAGAAC
GGCTTCACCGAGGGCTTCATCATCAGCGACGGCATCTTCAAGGAGGACCTCGGCGGCGGCGTCTCGCAGATGGCGACCAC
GACCTTCAACGCGATGTTCTTCGCTGGCCTGAAGGACATCGAGCACAAGCCGCACTCGTTCTACATCGACCGCTACCCCG
TGGGCCGCGAGGCGACGGTGGCCTGGGGCGCGGTCGACCTGCGGTTCGAGAACGACACGCCGTACGGCGTGCTCGTGCAC
GCGCACGTCACGCCGGCGACGTCGTCGTCCCAGGGCGTGGTGACCGTGTCGATGTACTCCACGAAGTACTGGGACATCTC
TACCACCACCTCGGACCGCTACAACTACCGCCAGCCGGCGACCCGCACCCTGACCACCCCGGACTGCTACCCGAACACCG
GGTACGCCGGCTTCGACGTGGACGTCACGCGCACCTTCCGCCGCCACGGCGAGGACGCCGTCGACCACACCGAGAAGTTC
CACACCGCCTACACGCCCTCCGACACGGTGATCTGCAAGAAGCCCAAGCAGCGAGGTGACTGA

Upstream 100 bases:

>100_bases
CGGATCGTGGGTGCGCCGGCCATCCTGGCCGGGTCGACCGTGATGCGGTCAGTGGACATGCTCACAGTCTAGGCGACGGG
CGCCTCCTAGGATGGCGCGC

Downstream 100 bases:

>100_bases
GGCGACACGCCCGCCGGTTCTGGCTGCCAGGTCGGCCGTGACCGGGGCCGCCGCTGGTCGTTTGGCCAGACATGCGACTG
CTGCTCGGTGCCCTGCTCGT

Product: VanW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 580; Mature: 580

Protein sequence:

>580_residues
MNQQPTVPAREKEGGKVVLLMLAGLVLLAGAAYGALYLAAGDKVPRGTTVAGVDIGGRTPADAEEVLRTGLADRVDRPIT
VAAEGARSTLDPGEAGLTVDYAASVAEAGGGRSWSPGRLWDYWTGGDDLDPVLDVDDAAFDAALDKLGEDLGTPPVEGDV
KFRDGKVVVTDPATGEEIHPEAARLAITTAYIAEDATDVELELRPADPEVDAADLQEALEAFANPAMSGPVTLVFGDSPV
RLDPADFGKVLGMGAEDGELVPDLREKKLVKLVDRGISQDGAPVDATVALVDGKPKVIPAKPGVTYKPSDVSDAFLELVA
REGDREMKVPSTVAEPDFTTKDARALKIREQVSTFTTYYPYAEYRNINIGRAAELIDGTVLKPGDEFSLNGIVGERTREN
GFTEGFIISDGIFKEDLGGGVSQMATTTFNAMFFAGLKDIEHKPHSFYIDRYPVGREATVAWGAVDLRFENDTPYGVLVH
AHVTPATSSSQGVVTVSMYSTKYWDISTTTSDRYNYRQPATRTLTTPDCYPNTGYAGFDVDVTRTFRRHGEDAVDHTEKF
HTAYTPSDTVICKKPKQRGD

Sequences:

>Translated_580_residues
MNQQPTVPAREKEGGKVVLLMLAGLVLLAGAAYGALYLAAGDKVPRGTTVAGVDIGGRTPADAEEVLRTGLADRVDRPIT
VAAEGARSTLDPGEAGLTVDYAASVAEAGGGRSWSPGRLWDYWTGGDDLDPVLDVDDAAFDAALDKLGEDLGTPPVEGDV
KFRDGKVVVTDPATGEEIHPEAARLAITTAYIAEDATDVELELRPADPEVDAADLQEALEAFANPAMSGPVTLVFGDSPV
RLDPADFGKVLGMGAEDGELVPDLREKKLVKLVDRGISQDGAPVDATVALVDGKPKVIPAKPGVTYKPSDVSDAFLELVA
REGDREMKVPSTVAEPDFTTKDARALKIREQVSTFTTYYPYAEYRNINIGRAAELIDGTVLKPGDEFSLNGIVGERTREN
GFTEGFIISDGIFKEDLGGGVSQMATTTFNAMFFAGLKDIEHKPHSFYIDRYPVGREATVAWGAVDLRFENDTPYGVLVH
AHVTPATSSSQGVVTVSMYSTKYWDISTTTSDRYNYRQPATRTLTTPDCYPNTGYAGFDVDVTRTFRRHGEDAVDHTEKF
HTAYTPSDTVICKKPKQRGD
>Mature_580_residues
MNQQPTVPAREKEGGKVVLLMLAGLVLLAGAAYGALYLAAGDKVPRGTTVAGVDIGGRTPADAEEVLRTGLADRVDRPIT
VAAEGARSTLDPGEAGLTVDYAASVAEAGGGRSWSPGRLWDYWTGGDDLDPVLDVDDAAFDAALDKLGEDLGTPPVEGDV
KFRDGKVVVTDPATGEEIHPEAARLAITTAYIAEDATDVELELRPADPEVDAADLQEALEAFANPAMSGPVTLVFGDSPV
RLDPADFGKVLGMGAEDGELVPDLREKKLVKLVDRGISQDGAPVDATVALVDGKPKVIPAKPGVTYKPSDVSDAFLELVA
REGDREMKVPSTVAEPDFTTKDARALKIREQVSTFTTYYPYAEYRNINIGRAAELIDGTVLKPGDEFSLNGIVGERTREN
GFTEGFIISDGIFKEDLGGGVSQMATTTFNAMFFAGLKDIEHKPHSFYIDRYPVGREATVAWGAVDLRFENDTPYGVLVH
AHVTPATSSSQGVVTVSMYSTKYWDISTTTSDRYNYRQPATRTLTTPDCYPNTGYAGFDVDVTRTFRRHGEDAVDHTEKF
HTAYTPSDTVICKKPKQRGD

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 62293; Mature: 62293

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQQPTVPAREKEGGKVVLLMLAGLVLLAGAAYGALYLAAGDKVPRGTTVAGVDIGGRTP
CCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEEECCCCCC
ADAEEVLRTGLADRVDRPITVAAEGARSTLDPGEAGLTVDYAASVAEAGGGRSWSPGRLW
CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCE
DYWTGGDDLDPVLDVDDAAFDAALDKLGEDLGTPPVEGDVKFRDGKVVVTDPATGEEIHP
EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEECCCCCCCCCC
EAARLAITTAYIAEDATDVELELRPADPEVDAADLQEALEAFANPAMSGPVTLVFGDSPV
CHHHEEEEEEEHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCC
RLDPADFGKVLGMGAEDGELVPDLREKKLVKLVDRGISQDGAPVDATVALVDGKPKVIPA
EECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEC
KPGVTYKPSDVSDAFLELVAREGDREMKVPSTVAEPDFTTKDARALKIREQVSTFTTYYP
CCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECC
YAEYRNINIGRAAELIDGTVLKPGDEFSLNGIVGERTRENGFTEGFIISDGIFKEDLGGG
CHHHCCCCCCHHHHHHCCCEECCCCCEEECCEECCCCCCCCCCCCEEEECCCCHHHHCCC
VSQMATTTFNAMFFAGLKDIEHKPHSFYIDRYPVGREATVAWGAVDLRFENDTPYGVLVH
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCEEEEEE
AHVTPATSSSQGVVTVSMYSTKYWDISTTTSDRYNYRQPATRTLTTPDCYPNTGYAGFDV
EEECCCCCCCCCEEEEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
DVTRTFRRHGEDAVDHTEKFHTAYTPSDTVICKKPKQRGD
HHHHHHHHCCCHHHHHHHHHCEEECCCCCEEECCCCCCCC
>Mature Secondary Structure
MNQQPTVPAREKEGGKVVLLMLAGLVLLAGAAYGALYLAAGDKVPRGTTVAGVDIGGRTP
CCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEEECCCCCC
ADAEEVLRTGLADRVDRPITVAAEGARSTLDPGEAGLTVDYAASVAEAGGGRSWSPGRLW
CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCE
DYWTGGDDLDPVLDVDDAAFDAALDKLGEDLGTPPVEGDVKFRDGKVVVTDPATGEEIHP
EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEECCCCCCCCCC
EAARLAITTAYIAEDATDVELELRPADPEVDAADLQEALEAFANPAMSGPVTLVFGDSPV
CHHHEEEEEEEHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCC
RLDPADFGKVLGMGAEDGELVPDLREKKLVKLVDRGISQDGAPVDATVALVDGKPKVIPA
EECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEC
KPGVTYKPSDVSDAFLELVAREGDREMKVPSTVAEPDFTTKDARALKIREQVSTFTTYYP
CCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECC
YAEYRNINIGRAAELIDGTVLKPGDEFSLNGIVGERTRENGFTEGFIISDGIFKEDLGGG
CHHHCCCCCCHHHHHHCCCEECCCCCEEECCEECCCCCCCCCCCCEEEECCCCHHHHCCC
VSQMATTTFNAMFFAGLKDIEHKPHSFYIDRYPVGREATVAWGAVDLRFENDTPYGVLVH
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCEEEEEE
AHVTPATSSSQGVVTVSMYSTKYWDISTTTSDRYNYRQPATRTLTTPDCYPNTGYAGFDV
EEECCCCCCCCCEEEEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
DVTRTFRRHGEDAVDHTEKFHTAYTPSDTVICKKPKQRGD
HHHHHHHHCCCHHHHHHHHHCEEECCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]