| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715333
Identifier: 119715333
GI number: 119715333
Start: 1155215
End: 1156129
Strand: Reverse
Name: 119715333
Synonym: Noca_1095
Alternate gene names: NA
Gene position: 1156129-1155215 (Counterclockwise)
Preceding gene: 119715334
Following gene: 119715332
Centisome position: 23.19
GC content: 63.06
Gene sequence:
>915_bases ATGGGCGGCAGCGGCGGATCGAGCTCGCGACCCAGCGACAGCGAGATGGAGGCCGTCCGGCAACGTGTCCGCGAAGATCT GCGCCGCCAGGAGACCGAGGCCGAGCTCAACGCCGTGCTCGCGCAAGAGCTGGCGGCATACAACGACCGAGACGTCGGGC TGGTTCAGGAACGTCTAGACGCAATCTCGGAGGCCTTGGCCGGGGGAGCACTCGAGATGGATCGACTTCTCTTCGGCGGC AGCGTTGCGAAACACACGTACGTTGACGGCCTGAGCGACGTGGATGCACTGGTCGTACTGAACGATCAGGGGGCCGCTCC GCATGAACTGGTCGAGCGCCTACGGCAGGCACTTGCCGGCAGCCTCCCCGCTGGCGACGCACTTTCGGTGGACGCTGGCG TCCTCGCGGTCACGATCACTTACCGCGACGGTTCACAGATTCAGCTCCTGCCGGCGGTTGAACGGGACGGCCACACCTCC ATCGCGTCTGAGGACGGAAGTCGTTGGCGTCATATCCGTCCACACAAGTTCGCTGAAAAGTTGACAGAAGTGAACAGGGC AAACGGTGGCGCGATCGTTCCGACTATCAAGCTTGCAAAGGCCGCGATGGCGGGGCTGCCGGACGGGCAGCGCCTGTCCG GATACCACGTTGAAGCCATCGCGGTTGACGCTTTCAAGGGCTATTCGGGGCGGCGTGACCGCATGTCAATGCTGCGTCAC CTGATAGAGCACACCGCCGATGTTGTAATGCGCCCGACCGGCGATATCACCGGCCAGTCGGTTCACATTGACAGTCACTT GGGCCCGGCTGGCAGCCCTCTACGCGAGACGGTCCGACAGGGTATCCGCCGGTTAGCATCGCGCCTCGCCCAAGTTACGA ACGCTGATGATCTACGAGCCATCCTTCATGAGTGA
Upstream 100 bases:
>100_bases GGCCGAGCCCGAACGATATGAGCATCTCGGGAGCAGGCACGTCAGGATCCGAGAAGTCTACGACGACTTGCGAGCCAGGC TCGCGTTGGAGGGCTGACGT
Downstream 100 bases:
>100_bases CGCGGTAGAGGATTCGCCGTCACGGCGTGAATCGAACACGGAGAAGGAGGCTCGCCTTATCGACCAGGCAATCAGCATGC AGGCATCTCTTCGCGACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MGGSGGSSSRPSDSEMEAVRQRVREDLRRQETEAELNAVLAQELAAYNDRDVGLVQERLDAISEALAGGALEMDRLLFGG SVAKHTYVDGLSDVDALVVLNDQGAAPHELVERLRQALAGSLPAGDALSVDAGVLAVTITYRDGSQIQLLPAVERDGHTS IASEDGSRWRHIRPHKFAEKLTEVNRANGGAIVPTIKLAKAAMAGLPDGQRLSGYHVEAIAVDAFKGYSGRRDRMSMLRH LIEHTADVVMRPTGDITGQSVHIDSHLGPAGSPLRETVRQGIRRLASRLAQVTNADDLRAILHE
Sequences:
>Translated_304_residues MGGSGGSSSRPSDSEMEAVRQRVREDLRRQETEAELNAVLAQELAAYNDRDVGLVQERLDAISEALAGGALEMDRLLFGG SVAKHTYVDGLSDVDALVVLNDQGAAPHELVERLRQALAGSLPAGDALSVDAGVLAVTITYRDGSQIQLLPAVERDGHTS IASEDGSRWRHIRPHKFAEKLTEVNRANGGAIVPTIKLAKAAMAGLPDGQRLSGYHVEAIAVDAFKGYSGRRDRMSMLRH LIEHTADVVMRPTGDITGQSVHIDSHLGPAGSPLRETVRQGIRRLASRLAQVTNADDLRAILHE >Mature_303_residues GGSGGSSSRPSDSEMEAVRQRVREDLRRQETEAELNAVLAQELAAYNDRDVGLVQERLDAISEALAGGALEMDRLLFGGS VAKHTYVDGLSDVDALVVLNDQGAAPHELVERLRQALAGSLPAGDALSVDAGVLAVTITYRDGSQIQLLPAVERDGHTSI ASEDGSRWRHIRPHKFAEKLTEVNRANGGAIVPTIKLAKAAMAGLPDGQRLSGYHVEAIAVDAFKGYSGRRDRMSMLRHL IEHTADVVMRPTGDITGQSVHIDSHLGPAGSPLRETVRQGIRRLASRLAQVTNADDLRAILHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32679; Mature: 32548
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGSGGSSSRPSDSEMEAVRQRVREDLRRQETEAELNAVLAQELAAYNDRDVGLVQERLD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AISEALAGGALEMDRLLFGGSVAKHTYVDGLSDVDALVVLNDQGAAPHELVERLRQALAG HHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC SLPAGDALSVDAGVLAVTITYRDGSQIQLLPAVERDGHTSIASEDGSRWRHIRPHKFAEK CCCCCCCCEECCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH LTEVNRANGGAIVPTIKLAKAAMAGLPDGQRLSGYHVEAIAVDAFKGYSGRRDRMSMLRH HHHHHCCCCCEECHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEHHCCCCCCHHHHHHHHH LIEHTADVVMRPTGDITGQSVHIDSHLGPAGSPLRETVRQGIRRLASRLAQVTNADDLRA HHHHHHHEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH ILHE HHCC >Mature Secondary Structure GGSGGSSSRPSDSEMEAVRQRVREDLRRQETEAELNAVLAQELAAYNDRDVGLVQERLD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AISEALAGGALEMDRLLFGGSVAKHTYVDGLSDVDALVVLNDQGAAPHELVERLRQALAG HHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC SLPAGDALSVDAGVLAVTITYRDGSQIQLLPAVERDGHTSIASEDGSRWRHIRPHKFAEK CCCCCCCCEECCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH LTEVNRANGGAIVPTIKLAKAAMAGLPDGQRLSGYHVEAIAVDAFKGYSGRRDRMSMLRH HHHHHCCCCCEECHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEHHCCCCCCHHHHHHHHH LIEHTADVVMRPTGDITGQSVHIDSHLGPAGSPLRETVRQGIRRLASRLAQVTNADDLRA HHHHHHHEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH ILHE HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA