| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715334
Identifier: 119715334
GI number: 119715334
Start: 1156133
End: 1157188
Strand: Reverse
Name: 119715334
Synonym: Noca_1096
Alternate gene names: NA
Gene position: 1157188-1156133 (Counterclockwise)
Preceding gene: 119715335
Following gene: 119715333
Centisome position: 23.21
GC content: 60.7
Gene sequence:
>1056_bases ATGCTGGCGCGTAGTCGAAACCTCCGGCTCACCGACAGGCCGCTCCGAGGACCGCTGCTCGTCCCAAGCGTCTCCAGCAA GGGGTTCCCTCTGATCGACGGAGTTTCTGAAGCCGGTACGTCGCTCCGGTCAGTTGCGCAGGATCTCACTGACAGTTTGC TTGTGTCGGCTTACGACCTGGCCCACCAGTTAATGCCGGAAGCGAAACTCTTTCTTGGAGAGAATCACCGGCAGACGATC TACGAAACGCCGGAACTGCTGGTCGTCGACAGCGGCGGCTACGAGCTCAACTCCTACGAATTTGAGGCCGGCGAGACTCG GCGCGGGCATTACTCCCCCCGAACGTTTACGCGCGAGGATTTTGAAGAGGTCGCCGACCGACTCCCGCGCGATCGGGAGC TACTTGTGGTCAGCTACGACGAGCCAATCGACCTCGCAGACCCGGACAGCGGCCGGGCGACCTACCAAACCCAGCGTGAG ACCGCCCAGCGCTTCTTCGCAGCTAGGCCCCACCTAAAGAGCGATTTCTTGCTCAAGCCCGAAGGTCGGAAGCCGTTCTT GGACGTTGTCGCGTTGACGCTTGACGCCCCAAATCTTCGGGCGTTCGATGTAATCGGCGTGACAGAAAAAGAACTTGGCC GCACCGTGCTCGACCGGCTCGTCACACTTGCTCGTCTACGGATTCTGCTAGATGGCAGCGGCTGTCGCGAAACGCCGATC CACGTCTTCGGGAGTCTCGATCCCCTCTACACACCTTTGTATTTCATGGCCGGTGGGGAGATTTTCGACGGGCTGAGTTG GCTACGGTATGCCTACGTTGAGGACTTATCCGCCCATCCCGACCAGCTCGCCGTGCTGACAGGCAACACCGACGACGGTG AGGAGACACGCGAGATGCGACGGCTGATGTCAAACTTGGCGGCCCTAGGCTCGATGCATAGAAGCCTGGCGCGTTGGGCG GCCGAGCCCGAACGATATGAGCATCTCGGGAGCAGGCACGTCAGGATCCGAGAAGTCTACGACGACTTGCGAGCCAGGCT CGCGTTGGAGGGCTGA
Upstream 100 bases:
>100_bases GCAGTGGCAAACGGGGTGCCCATTGAGCTCACGCACAGCTGTGAAACGACGGCGGCTCCCTGTGGATCTTGCTCGTCTTG TGCAGATAGGAGACTGCTCG
Downstream 100 bases:
>100_bases CGTATGGGCGGCAGCGGCGGATCGAGCTCGCGACCCAGCGACAGCGAGATGGAGGCCGTCCGGCAACGTGTCCGCGAAGA TCTGCGCCGCCAGGAGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MLARSRNLRLTDRPLRGPLLVPSVSSKGFPLIDGVSEAGTSLRSVAQDLTDSLLVSAYDLAHQLMPEAKLFLGENHRQTI YETPELLVVDSGGYELNSYEFEAGETRRGHYSPRTFTREDFEEVADRLPRDRELLVVSYDEPIDLADPDSGRATYQTQRE TAQRFFAARPHLKSDFLLKPEGRKPFLDVVALTLDAPNLRAFDVIGVTEKELGRTVLDRLVTLARLRILLDGSGCRETPI HVFGSLDPLYTPLYFMAGGEIFDGLSWLRYAYVEDLSAHPDQLAVLTGNTDDGEETREMRRLMSNLAALGSMHRSLARWA AEPERYEHLGSRHVRIREVYDDLRARLALEG
Sequences:
>Translated_351_residues MLARSRNLRLTDRPLRGPLLVPSVSSKGFPLIDGVSEAGTSLRSVAQDLTDSLLVSAYDLAHQLMPEAKLFLGENHRQTI YETPELLVVDSGGYELNSYEFEAGETRRGHYSPRTFTREDFEEVADRLPRDRELLVVSYDEPIDLADPDSGRATYQTQRE TAQRFFAARPHLKSDFLLKPEGRKPFLDVVALTLDAPNLRAFDVIGVTEKELGRTVLDRLVTLARLRILLDGSGCRETPI HVFGSLDPLYTPLYFMAGGEIFDGLSWLRYAYVEDLSAHPDQLAVLTGNTDDGEETREMRRLMSNLAALGSMHRSLARWA AEPERYEHLGSRHVRIREVYDDLRARLALEG >Mature_351_residues MLARSRNLRLTDRPLRGPLLVPSVSSKGFPLIDGVSEAGTSLRSVAQDLTDSLLVSAYDLAHQLMPEAKLFLGENHRQTI YETPELLVVDSGGYELNSYEFEAGETRRGHYSPRTFTREDFEEVADRLPRDRELLVVSYDEPIDLADPDSGRATYQTQRE TAQRFFAARPHLKSDFLLKPEGRKPFLDVVALTLDAPNLRAFDVIGVTEKELGRTVLDRLVTLARLRILLDGSGCRETPI HVFGSLDPLYTPLYFMAGGEIFDGLSWLRYAYVEDLSAHPDQLAVLTGNTDDGEETREMRRLMSNLAALGSMHRSLARWA AEPERYEHLGSRHVRIREVYDDLRARLALEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39632; Mature: 39632
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARSRNLRLTDRPLRGPLLVPSVSSKGFPLIDGVSEAGTSLRSVAQDLTDSLLVSAYDL CCCCCCCCEECCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AHQLMPEAKLFLGENHRQTIYETPELLVVDSGGYELNSYEFEAGETRRGHYSPRTFTRED HHHHCCHHHHHHCCCCCCCEECCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCHHH FEEVADRLPRDRELLVVSYDEPIDLADPDSGRATYQTQRETAQRFFAARPHLKSDFLLKP HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECC EGRKPFLDVVALTLDAPNLRAFDVIGVTEKELGRTVLDRLVTLARLRILLDGSGCRETPI CCCCCHHHHEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCH HVFGSLDPLYTPLYFMAGGEIFDGLSWLRYAYVEDLSAHPDQLAVLTGNTDDGEETREMR HEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHH RLMSNLAALGSMHRSLARWAAEPERYEHLGSRHVRIREVYDDLRARLALEG HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLARSRNLRLTDRPLRGPLLVPSVSSKGFPLIDGVSEAGTSLRSVAQDLTDSLLVSAYDL CCCCCCCCEECCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AHQLMPEAKLFLGENHRQTIYETPELLVVDSGGYELNSYEFEAGETRRGHYSPRTFTRED HHHHCCHHHHHHCCCCCCCEECCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCHHH FEEVADRLPRDRELLVVSYDEPIDLADPDSGRATYQTQRETAQRFFAARPHLKSDFLLKP HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECC EGRKPFLDVVALTLDAPNLRAFDVIGVTEKELGRTVLDRLVTLARLRILLDGSGCRETPI CCCCCHHHHEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCH HVFGSLDPLYTPLYFMAGGEIFDGLSWLRYAYVEDLSAHPDQLAVLTGNTDDGEETREMR HEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHH RLMSNLAALGSMHRSLARWAAEPERYEHLGSRHVRIREVYDDLRARLALEG HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA