Click here to switch to the map view.

The map label for this gene is mer [H]

Identifier: 119715101

GI number: 119715101

Start: 893655

End: 894725

Strand: Direct

Name: mer [H]

Synonym: Noca_0856

Alternate gene names: 119715101

Gene position: 893655-894725 (Clockwise)

Preceding gene: 119715100

Following gene: 119715102

Centisome position: 17.92

GC content: 72.74

Gene sequence:

>1071_bases
ATGACCGGAGCGCTGGGGGTCCAGATCACCCCGTGGAGCGGCTCGCGCGAGCTGGTAGCCCTCGGCCAGCGGCTGGCGCC
GGTCGTCGACACCGTCTGGGTCCAGGACCAGATGCTGGCCCGCAACGTGTACGCACTGCTCGGCGCCCTCGCGCAGGCCG
GCTGCGGCGTCGGGACCAACGTGACCTATCCGATCGGACGCAACCCGATCGAGATGGCCTCGTCGGCGGCAACCCTGGCC
GAGGTCGTGCCCGACGGCCGGGAGGTCATCGTCGGGATGGGCACCGGCGGGGCGATCGTGAACAGCCTGTTCCAGAAGGA
CCGGCCGATCTCGGCCGTGCGCGAGGCGATCGTCCTGATGCGGGACCTCTGGGCGGGTAGCCGGGTGGAGCTCGACCGCT
TCCCCACCCTGGGTCAGGCGCTGTCGTACAAGCCCGGTGCCGTCGCCGAGCTGACCTACGGCGTGGAACGACCGCCGTGC
ATCGTCCTCGCGGGTGTCGGGCCGCGCATCCTCGCCGTCGCCGGGGAGCACGCCGACGGCCTCATCTCGCCCAGCAACAT
GCCGACGCTGTCCCGGGCCGCGTTCCGCACCGGTCGATTCGGGGAGATATCGGGGCTCGACCGGGCCATGGCGGCCCGGC
CGGCGTCGATGGCGCCGCTGCGGTTGATCTTCGGCATCAACACCTCGATCTCGACCGACCGCAAGCGTGCCCGCGAGCAC
GCGCGCCGGCAGGTCGCACTCGTCGTCGGCAACCCGCGCCTGTGGCCCGACCTCGAGCGGGTCGGCCTCGACCTCGAGTC
GGCGGGCGCGGTCAAGGACGCCTTCGACGCCGGTCTCGGCATCGACGGTGCCGCCGCGCAGTGCTCCGACGACCTGGCGG
ACGCGCTGATCGTCTCGGGGACCCCGGAGGAGTGCGTGCCGGCCATCGCGGAGCTGCGCGACCTCGCCGCCGCGGAGGGC
TACACCGAGTTCTACGTCGGGGCCCCGCTCGGGCCCGACCCGCACGAGGCCGCCGGGCTCCTGATCGATCAGGTCATCCC
GCAGGTCTGGCCCGGACGAGCCTCGCGATGA

Upstream 100 bases:

>100_bases
AGCTGGCCGACCGAGTGGCCACGATGGACCGGGGGCTGCTGTCGCTCGCGCGTGCGGTGCCGCCCGGCGCCGCGCTCGCC
GGAGATGAAGGAGAAGCGTC

Downstream 100 bases:

>100_bases
CCCAGCTGTTGCGCACCGTGGACGAGGGAGTGGTGACCCTCACCCTCCACCGGCCCGAGAGCAGGAACGCCCTCACGACC
GAGCTGCTGCGCAGCCTCGT

Product: coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein

Products: NA

Alternate protein names: Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase; Methylene-H(4)MPT reductase [H]

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MTGALGVQITPWSGSRELVALGQRLAPVVDTVWVQDQMLARNVYALLGALAQAGCGVGTNVTYPIGRNPIEMASSAATLA
EVVPDGREVIVGMGTGGAIVNSLFQKDRPISAVREAIVLMRDLWAGSRVELDRFPTLGQALSYKPGAVAELTYGVERPPC
IVLAGVGPRILAVAGEHADGLISPSNMPTLSRAAFRTGRFGEISGLDRAMAARPASMAPLRLIFGINTSISTDRKRAREH
ARRQVALVVGNPRLWPDLERVGLDLESAGAVKDAFDAGLGIDGAAAQCSDDLADALIVSGTPEECVPAIAELRDLAAAEG
YTEFYVGAPLGPDPHEAAGLLIDQVIPQVWPGRASR

Sequences:

>Translated_356_residues
MTGALGVQITPWSGSRELVALGQRLAPVVDTVWVQDQMLARNVYALLGALAQAGCGVGTNVTYPIGRNPIEMASSAATLA
EVVPDGREVIVGMGTGGAIVNSLFQKDRPISAVREAIVLMRDLWAGSRVELDRFPTLGQALSYKPGAVAELTYGVERPPC
IVLAGVGPRILAVAGEHADGLISPSNMPTLSRAAFRTGRFGEISGLDRAMAARPASMAPLRLIFGINTSISTDRKRAREH
ARRQVALVVGNPRLWPDLERVGLDLESAGAVKDAFDAGLGIDGAAAQCSDDLADALIVSGTPEECVPAIAELRDLAAAEG
YTEFYVGAPLGPDPHEAAGLLIDQVIPQVWPGRASR
>Mature_355_residues
TGALGVQITPWSGSRELVALGQRLAPVVDTVWVQDQMLARNVYALLGALAQAGCGVGTNVTYPIGRNPIEMASSAATLAE
VVPDGREVIVGMGTGGAIVNSLFQKDRPISAVREAIVLMRDLWAGSRVELDRFPTLGQALSYKPGAVAELTYGVERPPCI
VLAGVGPRILAVAGEHADGLISPSNMPTLSRAAFRTGRFGEISGLDRAMAARPASMAPLRLIFGINTSISTDRKRAREHA
RRQVALVVGNPRLWPDLERVGLDLESAGAVKDAFDAGLGIDGAAAQCSDDLADALIVSGTPEECVPAIAELRDLAAAEGY
TEFYVGAPLGPDPHEAAGLLIDQVIPQVWPGRASR

Specific function: Catalyzes the oxidation of methyl-H(4)MPT to methylene- H(4)MPT [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mer family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019946 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: =1.5.99.11 [H]

Molecular weight: Translated: 37372; Mature: 37241

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGALGVQITPWSGSRELVALGQRLAPVVDTVWVQDQMLARNVYALLGALAQAGCGVGTN
CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VTYPIGRNPIEMASSAATLAEVVPDGREVIVGMGTGGAIVNSLFQKDRPISAVREAIVLM
EEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHH
RDLWAGSRVELDRFPTLGQALSYKPGAVAELTYGVERPPCIVLAGVGPRILAVAGEHADG
HHHCCCCCEEHHCCCCHHHHHCCCCCCCEEEECCCCCCCEEEEECCCCEEEEEECCCCCC
LISPSNMPTLSRAAFRTGRFGEISGLDRAMAARPASMAPLRLIFGINTSISTDRKRAREH
CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHH
ARRQVALVVGNPRLWPDLERVGLDLESAGAVKDAFDAGLGIDGAAAQCSDDLADALIVSG
HHHEEEEEECCCCCCCCHHHHCCCHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHEEECC
TPEECVPAIAELRDLAAAEGYTEFYVGAPLGPDPHEAAGLLIDQVIPQVWPGRASR
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TGALGVQITPWSGSRELVALGQRLAPVVDTVWVQDQMLARNVYALLGALAQAGCGVGTN
CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VTYPIGRNPIEMASSAATLAEVVPDGREVIVGMGTGGAIVNSLFQKDRPISAVREAIVLM
EEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHH
RDLWAGSRVELDRFPTLGQALSYKPGAVAELTYGVERPPCIVLAGVGPRILAVAGEHADG
HHHCCCCCEEHHCCCCHHHHHCCCCCCCEEEECCCCCCCEEEEECCCCEEEEEECCCCCC
LISPSNMPTLSRAAFRTGRFGEISGLDRAMAARPASMAPLRLIFGINTSISTDRKRAREH
CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHH
ARRQVALVVGNPRLWPDLERVGLDLESAGAVKDAFDAGLGIDGAAAQCSDDLADALIVSG
HHHEEEEEECCCCCCCCHHHHCCCHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHEEECC
TPEECVPAIAELRDLAAAEGYTEFYVGAPLGPDPHEAAGLLIDQVIPQVWPGRASR
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]