| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is glnA [H]
Identifier: 119715075
GI number: 119715075
Start: 871940
End: 873433
Strand: Direct
Name: glnA [H]
Synonym: Noca_0830
Alternate gene names: 119715075
Gene position: 871940-873433 (Clockwise)
Preceding gene: 119715074
Following gene: 119715076
Centisome position: 17.49
GC content: 68.27
Gene sequence:
>1494_bases ATGTCCACATCCACCAGATTCGTCGAGCAGTACGGCTTGTACTCATCAGAGCAGCAGCGCGCTGCCAAGCAGTCGCTGGA GAAGGTCCTCGAGCACGGGATCGAGATCGTGCGGCTGGTCTGGCCTGACCAGCACGGGCTCCTGCGGGGCAAGGCCCTGA CCGTGGACGCCTACATCGGCGCGCTGGAGACGGGCAACGAGATCACCATGGCGCCGTTCTTCTTCGACCCGGCCAACGCC ATCGTGTTCAACCCCTTCAGCCCCGACGGCGGCTTCGCCATCGACGGCCTCGGCGGCAGCCCGAACGTGAAGATGGTCCC GGACCCCGGCACCTTCACGGTGCTGCCATGGGCCAGGAACACCGCGCTGGTCTTCTGCGACCTGTACATGACCAACGGTC AGCCGTTCCCGCTGGCGCCGCGCACGATCTTGAAGGATGCGTTGGCGGCGCTGGCGCAGCACGGCGCCAAGCTCGTCACC GGCGTCGAGATGGAGTGGTACCTCACCCGCCTCGTGGACGACCAGCTCGCGACCGGTTCGCTCGGCGCTCCCGGGTCGCC GGCCGACCCGCCCCAGGTGGCGCCCGTGGCCCGCGGCTACAGCTACCTGCTCATGGAGCACCTCGACGAGATCGACCACG TCCTCGAGCCCATCCGCAAGGCGGTGCTGCAGATGGGCCTCCCCCTGCGCTCCATCGACGACGAGTGGGCACCGAGCCAG GTGGAGACCACCTTCGACGTCCTCGAGGGCCTGGCTGCTGCGGACTCCGCAGCTCTGTTCCGCACCACGGTCAAGCAGAT CGCCAAGCGCCACGGCCACCTCGCCTCGTTCATGTGCACCCCGGCGATCGCCGGCTTCTACGCCAATGGCTGGCACCTCC ACACCTCGCTGGCCGACATCGACAGCGGCGCGAACCTGATGGTCCCGACCGACAACTCCCCGCTGTCGGAGATCGGCCGG CACTACGTCGGCGGGACCCTGGAGCACGGGATCGCCGCCTCGGTCTTCACCACCCCGACCATCAACGGCTACCGGCGCCG GCGGCCCTACTCGCTGGCACCCGACCGGCTCGCATGGGGCCAGGACAACCGGGCCGCGATGATGCGGGTCATCAGTGCGC CCAACGACAAGGCGTCCCACGTGGAGAACCGCGTCGGCGACTCCGCCGCGAACCCCTACCTCTACGTCGCGGCCCAGGCC GCGTCCGGGCTGGACGGCGTCGTGAACAAGATCGACCCCGGTCCGATCAGCCTCGACCCGTACGCCGCCGACGTTCCCCA GCTGCCGACCACCCTGGCCGATGCCGTGGACGCTCTGGAGTCGGACGGCTTCTTCCGCAAGGTCTTCGGTGACGTGTTCG TCGACTACATGGTCGCGATGAAGCGCAGCGAGGTGGACCGGTACCAGGCCTGGGTCGAGCAGAACCCGGACCCCGACACC TACGTGAACGGCGTGACCGGCTGGGAGCACCGCGAGTACTTCGAGCTCTTCTGA
Upstream 100 bases:
>100_bases TGTGCCCGGGCCGCGTCCACGTGGGTTGCTAGCCGACCCGTGCCCCTGGCATGCGCCAACCCGTGCACACCAACACACTC ACGCACCATCGGAGGAACCC
Downstream 100 bases:
>100_bases GCACCCCGTCACCGGCGACGCAGGGGATCGAGACCGAGAGACACTCACATGCCGACGATCATCTTCCACAGTCCCGACGG AAGCTCGCACAAGGTCGACG
Product: L-glutamine synthetase
Products: NA
Alternate protein names: GS; Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 497; Mature: 496
Protein sequence:
>497_residues MSTSTRFVEQYGLYSSEQQRAAKQSLEKVLEHGIEIVRLVWPDQHGLLRGKALTVDAYIGALETGNEITMAPFFFDPANA IVFNPFSPDGGFAIDGLGGSPNVKMVPDPGTFTVLPWARNTALVFCDLYMTNGQPFPLAPRTILKDALAALAQHGAKLVT GVEMEWYLTRLVDDQLATGSLGAPGSPADPPQVAPVARGYSYLLMEHLDEIDHVLEPIRKAVLQMGLPLRSIDDEWAPSQ VETTFDVLEGLAAADSAALFRTTVKQIAKRHGHLASFMCTPAIAGFYANGWHLHTSLADIDSGANLMVPTDNSPLSEIGR HYVGGTLEHGIAASVFTTPTINGYRRRRPYSLAPDRLAWGQDNRAAMMRVISAPNDKASHVENRVGDSAANPYLYVAAQA ASGLDGVVNKIDPGPISLDPYAADVPQLPTTLADAVDALESDGFFRKVFGDVFVDYMVAMKRSEVDRYQAWVEQNPDPDT YVNGVTGWEHREYFELF
Sequences:
>Translated_497_residues MSTSTRFVEQYGLYSSEQQRAAKQSLEKVLEHGIEIVRLVWPDQHGLLRGKALTVDAYIGALETGNEITMAPFFFDPANA IVFNPFSPDGGFAIDGLGGSPNVKMVPDPGTFTVLPWARNTALVFCDLYMTNGQPFPLAPRTILKDALAALAQHGAKLVT GVEMEWYLTRLVDDQLATGSLGAPGSPADPPQVAPVARGYSYLLMEHLDEIDHVLEPIRKAVLQMGLPLRSIDDEWAPSQ VETTFDVLEGLAAADSAALFRTTVKQIAKRHGHLASFMCTPAIAGFYANGWHLHTSLADIDSGANLMVPTDNSPLSEIGR HYVGGTLEHGIAASVFTTPTINGYRRRRPYSLAPDRLAWGQDNRAAMMRVISAPNDKASHVENRVGDSAANPYLYVAAQA ASGLDGVVNKIDPGPISLDPYAADVPQLPTTLADAVDALESDGFFRKVFGDVFVDYMVAMKRSEVDRYQAWVEQNPDPDT YVNGVTGWEHREYFELF >Mature_496_residues STSTRFVEQYGLYSSEQQRAAKQSLEKVLEHGIEIVRLVWPDQHGLLRGKALTVDAYIGALETGNEITMAPFFFDPANAI VFNPFSPDGGFAIDGLGGSPNVKMVPDPGTFTVLPWARNTALVFCDLYMTNGQPFPLAPRTILKDALAALAQHGAKLVTG VEMEWYLTRLVDDQLATGSLGAPGSPADPPQVAPVARGYSYLLMEHLDEIDHVLEPIRKAVLQMGLPLRSIDDEWAPSQV ETTFDVLEGLAAADSAALFRTTVKQIAKRHGHLASFMCTPAIAGFYANGWHLHTSLADIDSGANLMVPTDNSPLSEIGRH YVGGTLEHGIAASVFTTPTINGYRRRRPYSLAPDRLAWGQDNRAAMMRVISAPNDKASHVENRVGDSAANPYLYVAAQAA SGLDGVVNKIDPGPISLDPYAADVPQLPTTLADAVDALESDGFFRKVFGDVFVDYMVAMKRSEVDRYQAWVEQNPDPDTY VNGVTGWEHREYFELF
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=471, Percent_Identity=27.1762208067941, Blast_Score=170, Evalue=2e-42, Organism=Escherichia coli, GI1790301, Length=492, Percent_Identity=29.4715447154472, Blast_Score=141, Evalue=1e-34, Organism=Escherichia coli, GI87081870, Length=494, Percent_Identity=26.3157894736842, Blast_Score=120, Evalue=2e-28,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 54241; Mature: 54110
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSTRFVEQYGLYSSEQQRAAKQSLEKVLEHGIEIVRLVWPDQHGLLRGKALTVDAYIG CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEHHHH ALETGNEITMAPFFFDPANAIVFNPFSPDGGFAIDGLGGSPNVKMVPDPGTFTVLPWARN HHCCCCEEEEEEEEECCCCEEEECCCCCCCCEEEECCCCCCCEEECCCCCCEEEEECCCC TALVFCDLYMTNGQPFPLAPRTILKDALAALAQHGAKLVTGVEMEWYLTRLVDDQLATGS CEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCC LGAPGSPADPPQVAPVARGYSYLLMEHLDEIDHVLEPIRKAVLQMGLPLRSIDDEWAPSQ CCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH VETTFDVLEGLAAADSAALFRTTVKQIAKRHGHLASFMCTPAIAGFYANGWHLHTSLADI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEHHHC DSGANLMVPTDNSPLSEIGRHYVGGTLEHGIAASVFTTPTINGYRRRRPYSLAPDRLAWG CCCCEEEEECCCCCHHHHHHHHCCCCHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCC QDNRAAMMRVISAPNDKASHVENRVGDSAANPYLYVAAQAASGLDGVVNKIDPGPISLDP CCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCC YAADVPQLPTTLADAVDALESDGFFRKVFGDVFVDYMVAMKRSEVDRYQAWVEQNPDPDT CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH YVNGVTGWEHREYFELF HCCCCCCCCCCHHHHCC >Mature Secondary Structure STSTRFVEQYGLYSSEQQRAAKQSLEKVLEHGIEIVRLVWPDQHGLLRGKALTVDAYIG CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEHHHH ALETGNEITMAPFFFDPANAIVFNPFSPDGGFAIDGLGGSPNVKMVPDPGTFTVLPWARN HHCCCCEEEEEEEEECCCCEEEECCCCCCCCEEEECCCCCCCEEECCCCCCEEEEECCCC TALVFCDLYMTNGQPFPLAPRTILKDALAALAQHGAKLVTGVEMEWYLTRLVDDQLATGS CEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCC LGAPGSPADPPQVAPVARGYSYLLMEHLDEIDHVLEPIRKAVLQMGLPLRSIDDEWAPSQ CCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH VETTFDVLEGLAAADSAALFRTTVKQIAKRHGHLASFMCTPAIAGFYANGWHLHTSLADI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEHHHC DSGANLMVPTDNSPLSEIGRHYVGGTLEHGIAASVFTTPTINGYRRRRPYSLAPDRLAWG CCCCEEEEECCCCCHHHHHHHHCCCCHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCC QDNRAAMMRVISAPNDKASHVENRVGDSAANPYLYVAAQAASGLDGVVNKIDPGPISLDP CCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCC YAADVPQLPTTLADAVDALESDGFFRKVFGDVFVDYMVAMKRSEVDRYQAWVEQNPDPDT CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH YVNGVTGWEHREYFELF HCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2575777 [H]