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The map label for this gene is thcC [H]

Identifier: 119715076

GI number: 119715076

Start: 873482

End: 873802

Strand: Direct

Name: thcC [H]

Synonym: Noca_0831

Alternate gene names: 119715076

Gene position: 873482-873802 (Clockwise)

Preceding gene: 119715075

Following gene: 119715077

Centisome position: 17.52

GC content: 69.16

Gene sequence:

>321_bases
ATGCCGACGATCATCTTCCACAGTCCCGACGGAAGCTCGCACAAGGTCGACGCCCGGGTCGGAGCCTCCGCGATGGAGAC
CGCGGTCAAGGTCGGGGTCCCGGGCATCGTCGCCGAATGCGGCGGCGCCCTGTCCTGCGCCACCTGCCACGTGTTCGTCG
ACTCCGCGTGGATCGCCGCCACCGGGATCGCGGACGAGTTCGAGGACGAGATGCTCGACGACGCGGAGACCCCGCGCACG
CCGACGAGCAGACTGTCCTGCCAGATCCGCGTGACCGACGACCTCGACGGCCTGGAACTCACGATCGCGCCCGAGCAGTG
A

Upstream 100 bases:

>100_bases
CGTGAACGGCGTGACCGGCTGGGAGCACCGCGAGTACTTCGAGCTCTTCTGAGCACCCCGTCACCGGCGACGCAGGGGAT
CGAGACCGAGAGACACTCAC

Downstream 100 bases:

>100_bases
GCGCCCGAACGCTGAGCGACAAGGTGGAGGTGGCTCAGCCGCACGCCGACGTACTCATCGTCGGCGGCGGCGAGGCCGGG
CTCGGCGTCGCCGACGAGCT

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MPTIIFHSPDGSSHKVDARVGASAMETAVKVGVPGIVAECGGALSCATCHVFVDSAWIAATGIADEFEDEMLDDAETPRT
PTSRLSCQIRVTDDLDGLELTIAPEQ

Sequences:

>Translated_106_residues
MPTIIFHSPDGSSHKVDARVGASAMETAVKVGVPGIVAECGGALSCATCHVFVDSAWIAATGIADEFEDEMLDDAETPRT
PTSRLSCQIRVTDDLDGLELTIAPEQ
>Mature_105_residues
PTIIFHSPDGSSHKVDARVGASAMETAVKVGVPGIVAECGGALSCATCHVFVDSAWIAATGIADEFEDEMLDDAETPRTP
TSRLSCQIRVTDDLDGLELTIAPEQ

Specific function: Ferredoxin-type protein which transfers electrons from rhodocoxin reductase to cytochrome CYP116 (ThcB), which is involved in the degradation of thiocarbamate herbicides [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 11118; Mature: 10986

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTIIFHSPDGSSHKVDARVGASAMETAVKVGVPGIVAECGGALSCATCHVFVDSAWIAA
CCEEEEECCCCCCEEEEHHCCCHHHHHHHHCCCCCHHHHCCCCCEEEEEEEEECCCEEEE
TGIADEFEDEMLDDAETPRTPTSRLSCQIRVTDDLDGLELTIAPEQ
CCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCC
>Mature Secondary Structure 
PTIIFHSPDGSSHKVDARVGASAMETAVKVGVPGIVAECGGALSCATCHVFVDSAWIAA
CEEEEECCCCCCEEEEHHCCCHHHHHHHHCCCCCHHHHCCCCCEEEEEEEEECCCEEEE
TGIADEFEDEMLDDAETPRTPTSRLSCQIRVTDDLDGLELTIAPEQ
CCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7836301 [H]