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The map label for this gene is fadE25 [H]

Identifier: 119715051

GI number: 119715051

Start: 847593

End: 848618

Strand: Direct

Name: fadE25 [H]

Synonym: Noca_0804

Alternate gene names: 119715051

Gene position: 847593-848618 (Clockwise)

Preceding gene: 119715050

Following gene: 119715052

Centisome position: 17.0

GC content: 69.79

Gene sequence:

>1026_bases
ATGAGATTCGACCTGACTCCCGACCAGTCGACCGTGGTCGCAACCCTGCGAGGGTTTCTCGGGGACCAGTTGAGCGACGC
GCGCCGACGCTCGCGCATCGATGGACGGACCGTCGACATCGAGCTCTGGGAGCGGCTGTGCGGGCTGGGATTCGCAGGCA
TCGGCCTCGATCCGACTGACGACGACGCAGGGCTCCTGGAGCTCGGCCTCGTGGCCGAGGAGCTCGGGGCTGCGCTGGCT
CCGGTGCCGTTCCTGCCCAACGCAGGGGCAGCACTCCTGGTGGTTCACGCTGGCTCTTCGGGGCAGCGTGATCGTTTGCT
GCCCGGCCTGCTCGACGGCGACGCCCCAGGGATGTTCGCCGTTGCTCCTGACGGTCTGGTGATCGACTCGGGGACCGAGT
CCGGGCCACTGGTCGTCGTCGACGACGGACAGGCGTACCTCGCCGGAGAGCGGGCTCGGCGCAAGCAGTTCGAGACCATC
GATCTCCTGCGGCGGTACTCCCGGCTGGAGTCCGCCGACGTGGGCGAGAAGCTCCCCGGCGACCCGGCAACGGCGATTGA
CATGATCGAGGTCCTCATCTCGGCCGAACTCACCGGGGTTGCCCAGCGGGCGCTGGACCTGGCCGTGGCCTACGCCCGGG
AACGCGAGCAGTTCGGCCGCAAGATCGGCACCTTCCAGGGCGTCTCGCACCGTTGTGCGGAGATGCTCCTCGAGGTCGAG
ACCGCCCGCTCCACGTGGTGGTACGCCGCGTGGACCGCTCGGGCGGCGCCAGAGGAGCTCCCGCTGGCGGCGTCGACGGC
GAAGGTTGCTGCCGTGTCGGCCGCCTTGTCGGCGACCACGGGCGCGCTCCAGGTACACGGTGGCATCGGGTTCACCTGGG
AGCACGAGATCCACCTGTTGCTGCGTCGTGCCCGGACCATGAGCCAGATCCTGGGGGACGCCCGGGGCCATCGGGCCCGG
ATCGCGCGGTTGATCGGCAGTGCCACACCGCCCGAGCTCGATGCCCCACAGGAGGCCGGCGTATGA

Upstream 100 bases:

>100_bases
ACCGCTACCTGCGTTCGCGCGCCAACTCGATCGAGGGTGGCACCACCGAGGTCCTCAAGGACATCGTCGCCGAGCGCGTC
CTGAGCCTGCCGAGGTCCCG

Downstream 100 bases:

>100_bases
ATGAGCTGATCCATCTGATGCGCACCACTGGGAGCCCCCGGTACTTCACCGACGAGGACGTGTCCGACGAGGTCATTCTC
CAGGCGATCGAAGCCGCGCG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MRFDLTPDQSTVVATLRGFLGDQLSDARRRSRIDGRTVDIELWERLCGLGFAGIGLDPTDDDAGLLELGLVAEELGAALA
PVPFLPNAGAALLVVHAGSSGQRDRLLPGLLDGDAPGMFAVAPDGLVIDSGTESGPLVVVDDGQAYLAGERARRKQFETI
DLLRRYSRLESADVGEKLPGDPATAIDMIEVLISAELTGVAQRALDLAVAYAREREQFGRKIGTFQGVSHRCAEMLLEVE
TARSTWWYAAWTARAAPEELPLAASTAKVAAVSAALSATTGALQVHGGIGFTWEHEIHLLLRRARTMSQILGDARGHRAR
IARLIGSATPPELDAPQEAGV

Sequences:

>Translated_341_residues
MRFDLTPDQSTVVATLRGFLGDQLSDARRRSRIDGRTVDIELWERLCGLGFAGIGLDPTDDDAGLLELGLVAEELGAALA
PVPFLPNAGAALLVVHAGSSGQRDRLLPGLLDGDAPGMFAVAPDGLVIDSGTESGPLVVVDDGQAYLAGERARRKQFETI
DLLRRYSRLESADVGEKLPGDPATAIDMIEVLISAELTGVAQRALDLAVAYAREREQFGRKIGTFQGVSHRCAEMLLEVE
TARSTWWYAAWTARAAPEELPLAASTAKVAAVSAALSATTGALQVHGGIGFTWEHEIHLLLRRARTMSQILGDARGHRAR
IARLIGSATPPELDAPQEAGV
>Mature_341_residues
MRFDLTPDQSTVVATLRGFLGDQLSDARRRSRIDGRTVDIELWERLCGLGFAGIGLDPTDDDAGLLELGLVAEELGAALA
PVPFLPNAGAALLVVHAGSSGQRDRLLPGLLDGDAPGMFAVAPDGLVIDSGTESGPLVVVDDGQAYLAGERARRKQFETI
DLLRRYSRLESADVGEKLPGDPATAIDMIEVLISAELTGVAQRALDLAVAYAREREQFGRKIGTFQGVSHRCAEMLLEVE
TARSTWWYAAWTARAAPEELPLAASTAKVAAVSAALSATTGALQVHGGIGFTWEHEIHLLLRRARTMSQILGDARGHRAR
IARLIGSATPPELDAPQEAGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI187960098, Length=139, Percent_Identity=35.9712230215827, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI4557231, Length=139, Percent_Identity=35.9712230215827, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17570075, Length=138, Percent_Identity=36.9565217391304, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17508101, Length=135, Percent_Identity=31.8518518518519, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17534899, Length=146, Percent_Identity=33.5616438356164, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24660351, Length=131, Percent_Identity=35.1145038167939, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24646207, Length=143, Percent_Identity=32.1678321678322, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI21356377, Length=154, Percent_Identity=30.5194805194805, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 36316; Mature: 36316

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFDLTPDQSTVVATLRGFLGDQLSDARRRSRIDGRTVDIELWERLCGLGFAGIGLDPTD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCC
DDAGLLELGLVAEELGAALAPVPFLPNAGAALLVVHAGSSGQRDRLLPGLLDGDAPGMFA
CCCCHHHHHHHHHHHCHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEE
VAPDGLVIDSGTESGPLVVVDDGQAYLAGERARRKQFETIDLLRRYSRLESADVGEKLPG
ECCCCEEEECCCCCCCEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DPATAIDMIEVLISAELTGVAQRALDLAVAYAREREQFGRKIGTFQGVSHRCAEMLLEVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TARSTWWYAAWTARAAPEELPLAASTAKVAAVSAALSATTGALQVHGGIGFTWEHEIHLL
HHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCEEEHHHHHHH
LRRARTMSQILGDARGHRARIARLIGSATPPELDAPQEAGV
HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHCCC
>Mature Secondary Structure
MRFDLTPDQSTVVATLRGFLGDQLSDARRRSRIDGRTVDIELWERLCGLGFAGIGLDPTD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCC
DDAGLLELGLVAEELGAALAPVPFLPNAGAALLVVHAGSSGQRDRLLPGLLDGDAPGMFA
CCCCHHHHHHHHHHHCHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEE
VAPDGLVIDSGTESGPLVVVDDGQAYLAGERARRKQFETIDLLRRYSRLESADVGEKLPG
ECCCCEEEECCCCCCCEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DPATAIDMIEVLISAELTGVAQRALDLAVAYAREREQFGRKIGTFQGVSHRCAEMLLEVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TARSTWWYAAWTARAAPEELPLAASTAKVAAVSAALSATTGALQVHGGIGFTWEHEIHLL
HHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCEEEHHHHHHH
LRRARTMSQILGDARGHRARIARLIGSATPPELDAPQEAGV
HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]