Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119715052

Identifier: 119715052

GI number: 119715052

Start: 848615

End: 849271

Strand: Direct

Name: 119715052

Synonym: Noca_0805

Alternate gene names: NA

Gene position: 848615-849271 (Clockwise)

Preceding gene: 119715051

Following gene: 119715053

Centisome position: 17.02

GC content: 66.82

Gene sequence:

>657_bases
ATGAATGAGCTGATCCATCTGATGCGCACCACTGGGAGCCCCCGGTACTTCACCGACGAGGACGTGTCCGACGAGGTCAT
TCTCCAGGCGATCGAAGCCGCGCGCTTCGCTCCGTCGGGCGGGAACAGGCAGCCGGTCCGGTGGATCGTCGTCCGCGACG
GGCAGATCAGGCGCGCCCTCGCCGAGCTCTACCTACCCCTGTGGCAGCGGGACATGGCGGCGTTCCTCAGCGGCGAGATG
CGCAGTGGAGCGGCGACGTTGGGCCCCGCGGTACGAGCCGCCAACGACTTCGCGGAGTCCTTCGGGAACGTCCCGGTGAT
CCTGGTCGCTTGCGTCGTGGAGGCCGACCTGCACGTCCACATGAAGGACTCGGCGGGTCATCCCAACTTCCTTGGCGGCT
CTTCGGTTTACACGTTCGTCCAGAACGCATGCCTCGCGCTCCGCTCGCTCGGCGTCGGTGCCACCATCACCACGCTGATC
TGCGAACGCGAGGCCGAGGCAGCACAGCTGCTCGGCATTCCCGACGGGATGCGCTCTGCCTGCCACATCGCAGTGGGCTA
CCCAGCAGGGGGTTTTCCGACCACCCTCACGCGCCTGGACGTCGAAGCGCTGGTCTCGTACGACCGGTACTCCGACGCCC
CGCCACCTGACTTGTGA

Upstream 100 bases:

>100_bases
GCCAGATCCTGGGGGACGCCCGGGGCCATCGGGCCCGGATCGCGCGGTTGATCGGCAGTGCCACACCGCCCGAGCTCGAT
GCCCCACAGGAGGCCGGCGT

Downstream 100 bases:

>100_bases
CCGATCTAACTCTGAGGGGTTGACGTACGTCACAGCGCGAGGCTAGATTCCACGCACCCTAACGAACGTTCGGTTCCCAC
GAGATGAGGAAGATCACATG

Product: nitroreductase

Products: NA

Alternate protein names: Oxidoreductase; NADH Dehydrogenase; Nitroreductase Family Protein; Ribonuclease BN

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNELIHLMRTTGSPRYFTDEDVSDEVILQAIEAARFAPSGGNRQPVRWIVVRDGQIRRALAELYLPLWQRDMAAFLSGEM
RSGAATLGPAVRAANDFAESFGNVPVILVACVVEADLHVHMKDSAGHPNFLGGSSVYTFVQNACLALRSLGVGATITTLI
CEREAEAAQLLGIPDGMRSACHIAVGYPAGGFPTTLTRLDVEALVSYDRYSDAPPPDL

Sequences:

>Translated_218_residues
MNELIHLMRTTGSPRYFTDEDVSDEVILQAIEAARFAPSGGNRQPVRWIVVRDGQIRRALAELYLPLWQRDMAAFLSGEM
RSGAATLGPAVRAANDFAESFGNVPVILVACVVEADLHVHMKDSAGHPNFLGGSSVYTFVQNACLALRSLGVGATITTLI
CEREAEAAQLLGIPDGMRSACHIAVGYPAGGFPTTLTRLDVEALVSYDRYSDAPPPDL
>Mature_218_residues
MNELIHLMRTTGSPRYFTDEDVSDEVILQAIEAARFAPSGGNRQPVRWIVVRDGQIRRALAELYLPLWQRDMAAFLSGEM
RSGAATLGPAVRAANDFAESFGNVPVILVACVVEADLHVHMKDSAGHPNFLGGSSVYTFVQNACLALRSLGVGATITTLI
CEREAEAAQLLGIPDGMRSACHIAVGYPAGGFPTTLTRLDVEALVSYDRYSDAPPPDL

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23488; Mature: 23488

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELIHLMRTTGSPRYFTDEDVSDEVILQAIEAARFAPSGGNRQPVRWIVVRDGQIRRAL
CHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHH
AELYLPLWQRDMAAFLSGEMRSGAATLGPAVRAANDFAESFGNVPVILVACVVEADLHVH
HHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEE
MKDSAGHPNFLGGSSVYTFVQNACLALRSLGVGATITTLICEREAEAAQLLGIPDGMRSA
EECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCCCHHH
CHIAVGYPAGGFPTTLTRLDVEALVSYDRYSDAPPPDL
EEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNELIHLMRTTGSPRYFTDEDVSDEVILQAIEAARFAPSGGNRQPVRWIVVRDGQIRRAL
CHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHH
AELYLPLWQRDMAAFLSGEMRSGAATLGPAVRAANDFAESFGNVPVILVACVVEADLHVH
HHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEE
MKDSAGHPNFLGGSSVYTFVQNACLALRSLGVGATITTLICEREAEAAQLLGIPDGMRSA
EECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCCCHHH
CHIAVGYPAGGFPTTLTRLDVEALVSYDRYSDAPPPDL
EEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA