| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is fliW [H]
Identifier: 119715018
GI number: 119715018
Start: 815266
End: 815673
Strand: Direct
Name: fliW [H]
Synonym: Noca_0771
Alternate gene names: 119715018
Gene position: 815266-815673 (Clockwise)
Preceding gene: 119715017
Following gene: 119715019
Centisome position: 16.35
GC content: 71.08
Gene sequence:
>408_bases ATGGCCGTGATGCCTCCCGACGAGACCGACCTCCCCGTGATCGAGCTGGCGCGACCCATGCTCGGCTTCCCCGAGAAGCA ACGCTTCGCGCTCGTGCGCCTCGACGAGGCCGGCGACCTGTGTCGGCTCACCTCGGTCGAGGAGCCCGAGCTGAGCTTCC TGGTCGTGCCGCCGGGCCGGTTCTTCCCCGACTACGCCCCCGCCGTGGACGACGACGTGCTCGACGAGCTGGAGATCCGG TCCGCCGAGGACGTGCTGCTCCTGGTCGTGCTCAACCCCGGCACGTCGCTCGCGTCGACCACTGCGAACCTCGCCGCGCC GGTGCTGGTGAACCCCGCCAAGCGGCGCGGTGGCCAGATCGTGCTGGACGACACCGACCTGCCGCTCGCCGCGCCACTGG TCTCGTGA
Upstream 100 bases:
>100_bases TGCAGCTGCAGGAGGTCGCCTACCAGGCGGCGCTGTCCGCGACCGCCCGGGTCATGCAGCCCAGCCTGTTGGACTTCCTC CGATGACCGCCGGTGCCATG
Downstream 100 bases:
>100_bases CCCTCGGGTCGGGCCCCATCGCCCGGCCACTGCAGGTAGCGTGACCGCCATGCTGGTCTTGAGCCGTCGTGCCGGAGAGA GCGTGGTGCTCGGCGAGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MAVMPPDETDLPVIELARPMLGFPEKQRFALVRLDEAGDLCRLTSVEEPELSFLVVPPGRFFPDYAPAVDDDVLDELEIR SAEDVLLLVVLNPGTSLASTTANLAAPVLVNPAKRRGGQIVLDDTDLPLAAPLVS
Sequences:
>Translated_135_residues MAVMPPDETDLPVIELARPMLGFPEKQRFALVRLDEAGDLCRLTSVEEPELSFLVVPPGRFFPDYAPAVDDDVLDELEIR SAEDVLLLVVLNPGTSLASTTANLAAPVLVNPAKRRGGQIVLDDTDLPLAAPLVS >Mature_134_residues AVMPPDETDLPVIELARPMLGFPEKQRFALVRLDEAGDLCRLTSVEEPELSFLVVPPGRFFPDYAPAVDDDVLDELEIRS AEDVLLLVVLNPGTSLASTTANLAAPVLVNPAKRRGGQIVLDDTDLPLAAPLVS
Specific function: Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum [H]
COG id: COG1699
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliW family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003775 [H]
Pfam domain/function: PF02623 FliW [H]
EC number: NA
Molecular weight: Translated: 14545; Mature: 14414
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVMPPDETDLPVIELARPMLGFPEKQRFALVRLDEAGDLCRLTSVEEPELSFLVVPPGR CCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEEECCCC FFPDYAPAVDDDVLDELEIRSAEDVLLLVVLNPGTSLASTTANLAAPVLVNPAKRRGGQI CCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCHHCCCHHCCCEEECHHHHCCCEE VLDDTDLPLAAPLVS EEECCCCCCCCCCCC >Mature Secondary Structure AVMPPDETDLPVIELARPMLGFPEKQRFALVRLDEAGDLCRLTSVEEPELSFLVVPPGR CCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEEECCCC FFPDYAPAVDDDVLDELEIRSAEDVLLLVVLNPGTSLASTTANLAAPVLVNPAKRRGGQI CCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCHHCCCHHCCCEEECHHHHCCCEE VLDDTDLPLAAPLVS EEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA