| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is flgL [H]
Identifier: 119715017
GI number: 119715017
Start: 814334
End: 815251
Strand: Direct
Name: flgL [H]
Synonym: Noca_0770
Alternate gene names: 119715017
Gene position: 814334-815251 (Clockwise)
Preceding gene: 119715016
Following gene: 119715018
Centisome position: 16.33
GC content: 70.48
Gene sequence:
>918_bases ATGGGCACCGTACGGATGACCCAGGGCATGATGAGCCGGCAGGCACTCACCGGCATGCAGGCCGGGCTGAACCGGCTCGC CAACGTGCAGGAGCAGCTCAGCACCGGCCGGGTCATCAACCGGCCGTCCGACGACCCCACCGGCGCGACGTCCGCGATGC GCCTGCGGTCTTCGGTCTCGGACCAGAAGCAGTACGTGCGCAACGCGGACAACGGGCTGGGGTGGCTCAACCAGATCGAC TCAACGCTCTCGAGCATCACCGACCAGGTGCGCCGTGCCCACGAGGTCGCGCTGCAGGGTGCCAACACCGGCTCCTTGGG CGCGGAGGCACGCGAGGCGCTGGCGATCGAGATCGACCAGATCCGTTCGGGGCTCGTCTCGACCGCGAACGCGACGTACC TCGAGCGTCCGGTCTTCGGTGGCGTCACCGCCGGGAGCGCGGCCTACGCGGAGGACCCGGTGACCGGCGCCGTCACGTAC CTGCCAGGCGCTCTCACCACGGGCGAGGGCGTGGTGCGCGTCGTGGGCGCAGGCGCGAAGGTGCGGGTCGACGTCGAAGG GCCCGATGTCTTCGGGCCGGACGGTGACTCGGTCTTCGACCACCTGACCGCCCTCGCCGCAGCGCTGCGAGCGGGTGATG CGGCGGCGATCACCGCGTCCGCCGGGATCCTCGACGCGGACACGAGGAAGGTCACGAACGTCCAGGCCGACATCGGCGTC CGCACCAAGCGGGTCGAGCAGGCCCGCACGGCGGCCAACGATGCCGACCTGCGGCTCACCTCGTCGCTGTCCGAGGTCGA GAACACCGACATGGTCAAGGCGACCGTCGACCTGCAGCTGCAGGAGGTCGCCTACCAGGCGGCGCTGTCCGCGACCGCCC GGGTCATGCAGCCCAGCCTGTTGGACTTCCTCCGATGA
Upstream 100 bases:
>100_bases TGGTCGCGGCCCAGCGAGCGTACGAGGCGGCCGCCAGGGTGATGACCACCCTGGACTCGGTCCTCGACACGCTGATCAAC CGGACCGGGCTGGTGCGCTG
Downstream 100 bases:
>100_bases CCGCCGGTGCCATGATGGCCGTGATGCCTCCCGACGAGACCGACCTCCCCGTGATCGAGCTGGCGCGACCCATGCTCGGC TTCCCCGAGAAGCAACGCTT
Product: flagellar hook-associated protein 3
Products: NA
Alternate protein names: HAP3 [H]
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MGTVRMTQGMMSRQALTGMQAGLNRLANVQEQLSTGRVINRPSDDPTGATSAMRLRSSVSDQKQYVRNADNGLGWLNQID STLSSITDQVRRAHEVALQGANTGSLGAEAREALAIEIDQIRSGLVSTANATYLERPVFGGVTAGSAAYAEDPVTGAVTY LPGALTTGEGVVRVVGAGAKVRVDVEGPDVFGPDGDSVFDHLTALAAALRAGDAAAITASAGILDADTRKVTNVQADIGV RTKRVEQARTAANDADLRLTSSLSEVENTDMVKATVDLQLQEVAYQAALSATARVMQPSLLDFLR
Sequences:
>Translated_305_residues MGTVRMTQGMMSRQALTGMQAGLNRLANVQEQLSTGRVINRPSDDPTGATSAMRLRSSVSDQKQYVRNADNGLGWLNQID STLSSITDQVRRAHEVALQGANTGSLGAEAREALAIEIDQIRSGLVSTANATYLERPVFGGVTAGSAAYAEDPVTGAVTY LPGALTTGEGVVRVVGAGAKVRVDVEGPDVFGPDGDSVFDHLTALAAALRAGDAAAITASAGILDADTRKVTNVQADIGV RTKRVEQARTAANDADLRLTSSLSEVENTDMVKATVDLQLQEVAYQAALSATARVMQPSLLDFLR >Mature_304_residues GTVRMTQGMMSRQALTGMQAGLNRLANVQEQLSTGRVINRPSDDPTGATSAMRLRSSVSDQKQYVRNADNGLGWLNQIDS TLSSITDQVRRAHEVALQGANTGSLGAEAREALAIEIDQIRSGLVSTANATYLERPVFGGVTAGSAAYAEDPVTGAVTYL PGALTTGEGVVRVVGAGAKVRVDVEGPDVFGPDGDSVFDHLTALAAALRAGDAAAITASAGILDADTRKVTNVQADIGVR TKRVEQARTAANDADLRLTSSLSEVENTDMVKATVDLQLQEVAYQAALSATARVMQPSLLDFLR
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
Organism=Escherichia coli, GI1787324, Length=330, Percent_Identity=25.7575757575758, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 31944; Mature: 31813
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTVRMTQGMMSRQALTGMQAGLNRLANVQEQLSTGRVINRPSDDPTGATSAMRLRSSVS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH DQKQYVRNADNGLGWLNQIDSTLSSITDQVRRAHEVALQGANTGSLGAEAREALAIEIDQ HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH IRSGLVSTANATYLERPVFGGVTAGSAAYAEDPVTGAVTYLPGALTTGEGVVRVVGAGAK HHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEECCCCE VRVDVEGPDVFGPDGDSVFDHLTALAAALRAGDAAAITASAGILDADTRKVTNVQADIGV EEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHCCHHHCCC RTKRVEQARTAANDADLRLTSSLSEVENTDMVKATVDLQLQEVAYQAALSATARVMQPSL HHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCHHH LDFLR HHHHC >Mature Secondary Structure GTVRMTQGMMSRQALTGMQAGLNRLANVQEQLSTGRVINRPSDDPTGATSAMRLRSSVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH DQKQYVRNADNGLGWLNQIDSTLSSITDQVRRAHEVALQGANTGSLGAEAREALAIEIDQ HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH IRSGLVSTANATYLERPVFGGVTAGSAAYAEDPVTGAVTYLPGALTTGEGVVRVVGAGAK HHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEECCCCE VRVDVEGPDVFGPDGDSVFDHLTALAAALRAGDAAAITASAGILDADTRKVTNVQADIGV EEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHCCHHHCCC RTKRVEQARTAANDADLRLTSSLSEVENTDMVKATVDLQLQEVAYQAALSATARVMQPSL HHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCHHH LDFLR HHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]