Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is fliW [H]

Identifier: 119715018

GI number: 119715018

Start: 815266

End: 815673

Strand: Direct

Name: fliW [H]

Synonym: Noca_0771

Alternate gene names: 119715018

Gene position: 815266-815673 (Clockwise)

Preceding gene: 119715017

Following gene: 119715019

Centisome position: 16.35

GC content: 71.08

Gene sequence:

>408_bases
ATGGCCGTGATGCCTCCCGACGAGACCGACCTCCCCGTGATCGAGCTGGCGCGACCCATGCTCGGCTTCCCCGAGAAGCA
ACGCTTCGCGCTCGTGCGCCTCGACGAGGCCGGCGACCTGTGTCGGCTCACCTCGGTCGAGGAGCCCGAGCTGAGCTTCC
TGGTCGTGCCGCCGGGCCGGTTCTTCCCCGACTACGCCCCCGCCGTGGACGACGACGTGCTCGACGAGCTGGAGATCCGG
TCCGCCGAGGACGTGCTGCTCCTGGTCGTGCTCAACCCCGGCACGTCGCTCGCGTCGACCACTGCGAACCTCGCCGCGCC
GGTGCTGGTGAACCCCGCCAAGCGGCGCGGTGGCCAGATCGTGCTGGACGACACCGACCTGCCGCTCGCCGCGCCACTGG
TCTCGTGA

Upstream 100 bases:

>100_bases
TGCAGCTGCAGGAGGTCGCCTACCAGGCGGCGCTGTCCGCGACCGCCCGGGTCATGCAGCCCAGCCTGTTGGACTTCCTC
CGATGACCGCCGGTGCCATG

Downstream 100 bases:

>100_bases
CCCTCGGGTCGGGCCCCATCGCCCGGCCACTGCAGGTAGCGTGACCGCCATGCTGGTCTTGAGCCGTCGTGCCGGAGAGA
GCGTGGTGCTCGGCGAGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MAVMPPDETDLPVIELARPMLGFPEKQRFALVRLDEAGDLCRLTSVEEPELSFLVVPPGRFFPDYAPAVDDDVLDELEIR
SAEDVLLLVVLNPGTSLASTTANLAAPVLVNPAKRRGGQIVLDDTDLPLAAPLVS

Sequences:

>Translated_135_residues
MAVMPPDETDLPVIELARPMLGFPEKQRFALVRLDEAGDLCRLTSVEEPELSFLVVPPGRFFPDYAPAVDDDVLDELEIR
SAEDVLLLVVLNPGTSLASTTANLAAPVLVNPAKRRGGQIVLDDTDLPLAAPLVS
>Mature_134_residues
AVMPPDETDLPVIELARPMLGFPEKQRFALVRLDEAGDLCRLTSVEEPELSFLVVPPGRFFPDYAPAVDDDVLDELEIRS
AEDVLLLVVLNPGTSLASTTANLAAPVLVNPAKRRGGQIVLDDTDLPLAAPLVS

Specific function: Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum [H]

COG id: COG1699

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliW family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003775 [H]

Pfam domain/function: PF02623 FliW [H]

EC number: NA

Molecular weight: Translated: 14545; Mature: 14414

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVMPPDETDLPVIELARPMLGFPEKQRFALVRLDEAGDLCRLTSVEEPELSFLVVPPGR
CCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEEECCCC
FFPDYAPAVDDDVLDELEIRSAEDVLLLVVLNPGTSLASTTANLAAPVLVNPAKRRGGQI
CCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCHHCCCHHCCCEEECHHHHCCCEE
VLDDTDLPLAAPLVS
EEECCCCCCCCCCCC
>Mature Secondary Structure 
AVMPPDETDLPVIELARPMLGFPEKQRFALVRLDEAGDLCRLTSVEEPELSFLVVPPGR
CCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEEECCCC
FFPDYAPAVDDDVLDELEIRSAEDVLLLVVLNPGTSLASTTANLAAPVLVNPAKRRGGQI
CCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCHHCCCHHCCCEEECHHHHCCCEE
VLDDTDLPLAAPLVS
EEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA