| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714953
Identifier: 119714953
GI number: 119714953
Start: 744330
End: 745469
Strand: Direct
Name: 119714953
Synonym: Noca_0706
Alternate gene names: NA
Gene position: 744330-745469 (Clockwise)
Preceding gene: 119714952
Following gene: 119714954
Centisome position: 14.93
GC content: 69.3
Gene sequence:
>1140_bases ATGTCGAGCATCCTGAAGCGCGCCGTCGTCCCGGCGGTCCTGGTGATCCTGCTGGTGGCTGCCGCGCTCACCATGTTCCG CGGAGAGGACCACAAGACCCTGACGGCGCACTTCCCGCGCGCGATCTCGATCTACGAGGGCAGCGACGTCCGCGTCCTCG GCGTGCCCGTCGGCAAGGTCGACACGGTCACGCCGTCCGGCACCGACGTCGTCGTCACCATGACGTACGACGCGGACCTC AAGCTGCCGGCCGACGCGAAGGCCGTGATCATCGCGCCGTCGATCGTGGGCGACCGGTTCGTGCAGCTGACCCCGGTCTA CACCGGTGGCGACGTGCTCGCCGACGGTGCGACGCTGGCGGGGGACCGGACCGCGGTGCCACTCGAGCTGGACCAGATCT ACAGCAGCCTCGACGACCTGACCGTGGCGCTCGGCCCGACCGGAGCGAACCGCAACGGGGCGTTCTCCGACCTCCTCGAG ACCACCGCCGAGAACTTCGGCGGCCAGGGCGCGAAGTTCCACCAGACGATCCAGGACTTCGGCAAGCTCAGCCAGACGCT CGACGACAACAAGGAGGAGCTGTTCGGCTCCGCCCAGGAGCTCGAGGGCTTCATCGGCACCCTCGCGCGCAACGACAAGA CGGTGCGCAAGTTCAACGACTCGCTCTCGCAGGTGTCGACGATGCTCTCCGGCGAGCGCCAGGAGCTCTCGGCGTCGCTG CAGCACCTCGCCACGGCGCTCGGCCAGGTCTCGGACTTCGTGAAGGAGAACCGCGAGGTGCTCGGCAGCAACATCTCCGG CCTCAACCGGGTCTCCAAGGTGCTGGTCAAGCGGCGCTCGGAGCTCGACGGCATCCTCGACTCCGGCCCGCTGGCGCTGA ACAACCTGGCGCTGACCTACAACCCGCAGGCCGGCACCCTCGACACGAACGCGAACCTCGGCGAGGTGTTCAACCAGGTG GAGTCCGACCCCTCGACGTTCCTCTGCGGCTTCCTGAGCCAGGCCGACACGTCCGGAGCGCTGTGCGACCTGGTCCAGCA GGCCCTGCCGCGGCCCGGGACCGGCGCCCCAGGAGCGCCGAGGTCGTCGGTCGACCTGTTCGACCCGACCCTGGCGGGCC TCGTGGGGGTGGCCCGATGA
Upstream 100 bases:
>100_bases GAGCCGTTCTACCGCGTCTTCGCCAGCACGCTCGGCAACGGGCCCTGGTTCGACACCTACATCCAGAACATGCCGCCGGT GCCGCAGGTGGGTGGCTGAC
Downstream 100 bases:
>100_bases TGAGGCCGCGGATGCTGCGCGCCGTCGTCGCCGCTGCGGCCGGAGCGGTGCTGCTGACCGGGTGCCAGTTCGACGTCTAC GCATTGCCGCTGCCCGGTGG
Product: virulence factor Mce family protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family D; MCE Family Protein; Mce Family D; MCE-Family Protein; Virulence Factor MCE-Like Protein; MCE-Family B; Mammalian Cell Entry Related Domain Protein; Mce-Related Protein; MCE-Family
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MSSILKRAVVPAVLVILLVAAALTMFRGEDHKTLTAHFPRAISIYEGSDVRVLGVPVGKVDTVTPSGTDVVVTMTYDADL KLPADAKAVIIAPSIVGDRFVQLTPVYTGGDVLADGATLAGDRTAVPLELDQIYSSLDDLTVALGPTGANRNGAFSDLLE TTAENFGGQGAKFHQTIQDFGKLSQTLDDNKEELFGSAQELEGFIGTLARNDKTVRKFNDSLSQVSTMLSGERQELSASL QHLATALGQVSDFVKENREVLGSNISGLNRVSKVLVKRRSELDGILDSGPLALNNLALTYNPQAGTLDTNANLGEVFNQV ESDPSTFLCGFLSQADTSGALCDLVQQALPRPGTGAPGAPRSSVDLFDPTLAGLVGVAR
Sequences:
>Translated_379_residues MSSILKRAVVPAVLVILLVAAALTMFRGEDHKTLTAHFPRAISIYEGSDVRVLGVPVGKVDTVTPSGTDVVVTMTYDADL KLPADAKAVIIAPSIVGDRFVQLTPVYTGGDVLADGATLAGDRTAVPLELDQIYSSLDDLTVALGPTGANRNGAFSDLLE TTAENFGGQGAKFHQTIQDFGKLSQTLDDNKEELFGSAQELEGFIGTLARNDKTVRKFNDSLSQVSTMLSGERQELSASL QHLATALGQVSDFVKENREVLGSNISGLNRVSKVLVKRRSELDGILDSGPLALNNLALTYNPQAGTLDTNANLGEVFNQV ESDPSTFLCGFLSQADTSGALCDLVQQALPRPGTGAPGAPRSSVDLFDPTLAGLVGVAR >Mature_378_residues SSILKRAVVPAVLVILLVAAALTMFRGEDHKTLTAHFPRAISIYEGSDVRVLGVPVGKVDTVTPSGTDVVVTMTYDADLK LPADAKAVIIAPSIVGDRFVQLTPVYTGGDVLADGATLAGDRTAVPLELDQIYSSLDDLTVALGPTGANRNGAFSDLLET TAENFGGQGAKFHQTIQDFGKLSQTLDDNKEELFGSAQELEGFIGTLARNDKTVRKFNDSLSQVSTMLSGERQELSASLQ HLATALGQVSDFVKENREVLGSNISGLNRVSKVLVKRRSELDGILDSGPLALNNLALTYNPQAGTLDTNANLGEVFNQVE SDPSTFLCGFLSQADTSGALCDLVQQALPRPGTGAPGAPRSSVDLFDPTLAGLVGVAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39915; Mature: 39784
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSILKRAVVPAVLVILLVAAALTMFRGEDHKTLTAHFPRAISIYEGSDVRVLGVPVGKV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCEEEEEECCCCC DTVTPSGTDVVVTMTYDADLKLPADAKAVIIAPSIVGDRFVQLTPVYTGGDVLADGATLA CCCCCCCCEEEEEEEECCCEECCCCCCEEEEECHHHCCCEEEEEEEEECCCEEECCCEEC GDRTAVPLELDQIYSSLDDLTVALGPTGANRNGAFSDLLETTAENFGGQGAKFHQTIQDF CCCCCCCEEHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH GKLSQTLDDNKEELFGSAQELEGFIGTLARNDKTVRKFNDSLSQVSTMLSGERQELSASL HHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH QHLATALGQVSDFVKENREVLGSNISGLNRVSKVLVKRRSELDGILDSGPLALNNLALTY HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEE NPQAGTLDTNANLGEVFNQVESDPSTFLCGFLSQADTSGALCDLVQQALPRPGTGAPGAP CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC RSSVDLFDPTLAGLVGVAR CCCCCCCCHHHHHHHHCCC >Mature Secondary Structure SSILKRAVVPAVLVILLVAAALTMFRGEDHKTLTAHFPRAISIYEGSDVRVLGVPVGKV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCEEEEEECCCCC DTVTPSGTDVVVTMTYDADLKLPADAKAVIIAPSIVGDRFVQLTPVYTGGDVLADGATLA CCCCCCCCEEEEEEEECCCEECCCCCCEEEEECHHHCCCEEEEEEEEECCCEEECCCEEC GDRTAVPLELDQIYSSLDDLTVALGPTGANRNGAFSDLLETTAENFGGQGAKFHQTIQDF CCCCCCCEEHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH GKLSQTLDDNKEELFGSAQELEGFIGTLARNDKTVRKFNDSLSQVSTMLSGERQELSASL HHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH QHLATALGQVSDFVKENREVLGSNISGLNRVSKVLVKRRSELDGILDSGPLALNNLALTY HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEE NPQAGTLDTNANLGEVFNQVESDPSTFLCGFLSQADTSGALCDLVQQALPRPGTGAPGAP CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC RSSVDLFDPTLAGLVGVAR CCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA