| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119714952
Identifier: 119714952
GI number: 119714952
Start: 743363
End: 744328
Strand: Direct
Name: 119714952
Synonym: Noca_0705
Alternate gene names: NA
Gene position: 743363-744328 (Clockwise)
Preceding gene: 119714951
Following gene: 119714953
Centisome position: 14.91
GC content: 68.43
Gene sequence:
>966_bases ATGACTCCCTTCCGTGAGCGCAACCCCGTGATCGTCGGGGCGGTGAGCCTGGTCGTCCTCGCGCTGGTGATGCTGGCCGC CTTCCGGGCCCAGGACCTGCCGCTGATCGGTGGCGGCGACACCTACTACGCCGCGTTCTCCGAGGCCGGCGGGCTCGAGC CGAACGACGAGGTCCGGATCGCCGGAGTCCGGGTCGGCAAGGTCGAGAGCGTCGAGCTCGAGGGCGACCACGTGCGCGTC ACGTTCCGGGTCGACACCGCGTCGGAGTTCGGCGACGACACGCACGCCGCGATCAAGGTCAAGACGCTGCTCGGCGCGAT GTATCTCGCCCTGCAGCCCGCTGGCGCGGGACAGCTCGACGAGGGAGCCGAGATCCCGGTCGAGCGGACCAGCTCGCCGT ACGACGTCGTCGACGCGTTCGCGGGGCTTGCGAAGACCTCCGAGCGGATCGACACCGATCGGCTCGCGGAGTCGCTGACC ACGCTGGCCGACCTCAGCCGGAACACCCCCGAGGAGTTCCGCCAGGCGCTCGACGGGGTCTCCCGGCTCTCCTCGAACAT CGCGGCGCGGGACCAGCAGATCAACAGTCTGCTCACGAACCTCAAGCGCGTGACCGGCGTCCTCAACGAGCGTGACGACG ACATCATCGGCCTGATGAAGGACTCCGACGTCTTGTTCCGGGCGCTGGTGGCGCGGCGCGACGCGGTGCACAACCTGCTG GTCTCCACCACCCGCTTGTCGAAGGAGCTGACCGCGCTGATCGAGCAGAGCCGCGCCGACCTCAAGCCGGCGCTGACCCA CCTCGAGAACGTCCTGGCCGTGCTCAACAAGAACGAGGACAACCTCGACAACAGCCTGCGCCTGATGGAGCCGTTCTACC GCGTCTTCGCCAGCACGCTCGGCAACGGGCCCTGGTTCGACACCTACATCCAGAACATGCCGCCGGTGCCGCAGGTGGGT GGCTGA
Upstream 100 bases:
>100_bases ACCTCGTTCCCCCGAACAACTTCGAGGGGACCCCGATGAACCACCCCACGAAGTTCTTCTCCTCCACTTCGTTCCCCCGA ACAACTTCGAGGGGACCCCG
Downstream 100 bases:
>100_bases CATGTCGAGCATCCTGAAGCGCGCCGTCGTCCCGGCGGTCCTGGTGATCCTGCTGGTGGCTGCCGCGCTCACCATGTTCC GCGGAGAGGACCACAAGACC
Product: virulence factor Mce family protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family C; MCE-Family B; MCE Family Protein; MCE-Family Protein; Mammalian Cell Entry Related Domain Protein; Mce Family C; Mce Family B; Mammalian Cell Entry-Like Domain-Containing Protein; Mce-Related Protein; Mce-Family C; Mce Family Protein Mce5B; Virulence Factor MCE-Like Protein; MCE-Family D; Mce Family Protein Mce5C; MCE-Family
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTPFRERNPVIVGAVSLVVLALVMLAAFRAQDLPLIGGGDTYYAAFSEAGGLEPNDEVRIAGVRVGKVESVELEGDHVRV TFRVDTASEFGDDTHAAIKVKTLLGAMYLALQPAGAGQLDEGAEIPVERTSSPYDVVDAFAGLAKTSERIDTDRLAESLT TLADLSRNTPEEFRQALDGVSRLSSNIAARDQQINSLLTNLKRVTGVLNERDDDIIGLMKDSDVLFRALVARRDAVHNLL VSTTRLSKELTALIEQSRADLKPALTHLENVLAVLNKNEDNLDNSLRLMEPFYRVFASTLGNGPWFDTYIQNMPPVPQVG G
Sequences:
>Translated_321_residues MTPFRERNPVIVGAVSLVVLALVMLAAFRAQDLPLIGGGDTYYAAFSEAGGLEPNDEVRIAGVRVGKVESVELEGDHVRV TFRVDTASEFGDDTHAAIKVKTLLGAMYLALQPAGAGQLDEGAEIPVERTSSPYDVVDAFAGLAKTSERIDTDRLAESLT TLADLSRNTPEEFRQALDGVSRLSSNIAARDQQINSLLTNLKRVTGVLNERDDDIIGLMKDSDVLFRALVARRDAVHNLL VSTTRLSKELTALIEQSRADLKPALTHLENVLAVLNKNEDNLDNSLRLMEPFYRVFASTLGNGPWFDTYIQNMPPVPQVG G >Mature_320_residues TPFRERNPVIVGAVSLVVLALVMLAAFRAQDLPLIGGGDTYYAAFSEAGGLEPNDEVRIAGVRVGKVESVELEGDHVRVT FRVDTASEFGDDTHAAIKVKTLLGAMYLALQPAGAGQLDEGAEIPVERTSSPYDVVDAFAGLAKTSERIDTDRLAESLTT LADLSRNTPEEFRQALDGVSRLSSNIAARDQQINSLLTNLKRVTGVLNERDDDIIGLMKDSDVLFRALVARRDAVHNLLV STTRLSKELTALIEQSRADLKPALTHLENVLAVLNKNEDNLDNSLRLMEPFYRVFASTLGNGPWFDTYIQNMPPVPQVGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34946; Mature: 34815
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPFRERNPVIVGAVSLVVLALVMLAAFRAQDLPLIGGGDTYYAAFSEAGGLEPNDEVRI CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEECCCCHHEEEHHHCCCCCCCCCEEE AGVRVGKVESVELEGDHVRVTFRVDTASEFGDDTHAAIKVKTLLGAMYLALQPAGAGQLD EEEEECCEEEEEECCCEEEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC EGAEIPVERTSSPYDVVDAFAGLAKTSERIDTDRLAESLTTLADLSRNTPEEFRQALDGV CCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SRLSSNIAARDQQINSLLTNLKRVTGVLNERDDDIIGLMKDSDVLFRALVARRDAVHNLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH VSTTRLSKELTALIEQSRADLKPALTHLENVLAVLNKNEDNLDNSLRLMEPFYRVFASTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH GNGPWFDTYIQNMPPVPQVGG CCCCCHHHHHHCCCCCCCCCC >Mature Secondary Structure TPFRERNPVIVGAVSLVVLALVMLAAFRAQDLPLIGGGDTYYAAFSEAGGLEPNDEVRI CCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEECCCCHHEEEHHHCCCCCCCCCEEE AGVRVGKVESVELEGDHVRVTFRVDTASEFGDDTHAAIKVKTLLGAMYLALQPAGAGQLD EEEEECCEEEEEECCCEEEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC EGAEIPVERTSSPYDVVDAFAGLAKTSERIDTDRLAESLTTLADLSRNTPEEFRQALDGV CCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SRLSSNIAARDQQINSLLTNLKRVTGVLNERDDDIIGLMKDSDVLFRALVARRDAVHNLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH VSTTRLSKELTALIEQSRADLKPALTHLENVLAVLNKNEDNLDNSLRLMEPFYRVFASTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH GNGPWFDTYIQNMPPVPQVGG CCCCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA