| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714951
Identifier: 119714951
GI number: 119714951
Start: 742125
End: 743171
Strand: Direct
Name: 119714951
Synonym: Noca_0704
Alternate gene names: NA
Gene position: 742125-743171 (Clockwise)
Preceding gene: 119714950
Following gene: 119714952
Centisome position: 14.88
GC content: 67.24
Gene sequence:
>1047_bases ATGAAGATGCTCGACCAGCGCACCAGCGCCGACCTCACCAAGCTGCTGATCTTCATCGTGGTGACGACGCTGGCCACCTC GGTGCTCGTCGCGACGATCGGCAACCTGACCTTCTCCAGCAAGCACGACTACCGCGCCGAGTTCGTCGACGCGACCGGCG TGGTGAAGGGCGACGACGTGCGCATCGCCGGGGTGAAGGTCGGGACCGTGAAGAGCGTCGAGGTCGTCGACCGCACCCGT GCCCTGGTCACCTTCGACGTCGACGACTCCGCCTCGATCAGCCAGGCCACGCACGCGGCGATCCGCTACCGCAACCTCGT CGGCCAGCGCTACATCGCACTCACCGACGAGATCGGCGACGTCGCCCCGCTGCCCGCGGGCGGGACGATCCCGGTCTCGC AGACCTCGCCGGCCCTCGACCTGACCGTCCTGTTCAACGGCTTCAAGCCGCTGTTCCAGGCGCTTTCGCCGGCCGACCTC AACCAGCTCTCGTACGAGATCGTCCAGGTCTTCCAGGGGGAGGGCGGGACCCTCGAGGGACTGCTCGCGCACACCGCCTC GGTGACCTCGACCCTGGCCAGCCGCGACCAGCTGATCGGTGACCTGATCGACAACCTCAACGAGGTGCTCGACCACATCG GCGACCGCGACGTCCAGCTGAGCCGGCTGATCACCACGTTCCGCACCTTCGTGGGCGGACTCAAGGACGACCGCCAGGCC ATCCTCGGCTCCCTGGACCAGATCTCCGAGCTCTCGGTGCAGACCGCCGGACTGGTCGACGGCATCCGTGAGCCGTTCGT CAGCGACATCCACCAGCTCCGCGAGGTCGCCCGCAACCTCGACAACGGCAAGGCCGAGCTGGACCGGGCCCTGCAGGTGC TGCCCATCAAGCTCAACAAGGTCGGCCGGACCGCGACCTACGGGTCCTGGTTCAACTTCTACCTGTGCCACTTCCAGGGT CGGATCCGCCTCCCGGGCGGACAGTCGGTGCCCGTCGACTACCCACCCAACGGCGTCAAGGTCGCAGACAGGTGTGATCT CGGATGA
Upstream 100 bases:
>100_bases CGCTGCTCGGTCCCGCGCTCGGCGTGCCGGCAGCTGAGGTCCCCGACCTGGGCCTGCTCCTCGTCGGCCCGATGGCACGC GGAGCGGAGGTGTCGCTGCG
Downstream 100 bases:
>100_bases ACCACCCCACGAGGTTCTTCTCCTCCACTTCATTCCCCCGAACAACCTCGAGGGGACCCCGATGAACCACCCCACGAAGT TCTTCTCCTCCACCTCGTTC
Product: virulence factor Mce family protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family B; MCE Family Protein; MCE-Family C; Mammalian Cell Entry Related Domain Protein; MCE-Family Protein; Mce Family B; Mce-Related Protein; Mce Family Protein Mce5B; Mammalian Cell Entry-Like Domain-Containing Protein; Mce Family Lipob; Virulence Factor MCE-Like Protein; MCE-Family; Mce Family C
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MKMLDQRTSADLTKLLIFIVVTTLATSVLVATIGNLTFSSKHDYRAEFVDATGVVKGDDVRIAGVKVGTVKSVEVVDRTR ALVTFDVDDSASISQATHAAIRYRNLVGQRYIALTDEIGDVAPLPAGGTIPVSQTSPALDLTVLFNGFKPLFQALSPADL NQLSYEIVQVFQGEGGTLEGLLAHTASVTSTLASRDQLIGDLIDNLNEVLDHIGDRDVQLSRLITTFRTFVGGLKDDRQA ILGSLDQISELSVQTAGLVDGIREPFVSDIHQLREVARNLDNGKAELDRALQVLPIKLNKVGRTATYGSWFNFYLCHFQG RIRLPGGQSVPVDYPPNGVKVADRCDLG
Sequences:
>Translated_348_residues MKMLDQRTSADLTKLLIFIVVTTLATSVLVATIGNLTFSSKHDYRAEFVDATGVVKGDDVRIAGVKVGTVKSVEVVDRTR ALVTFDVDDSASISQATHAAIRYRNLVGQRYIALTDEIGDVAPLPAGGTIPVSQTSPALDLTVLFNGFKPLFQALSPADL NQLSYEIVQVFQGEGGTLEGLLAHTASVTSTLASRDQLIGDLIDNLNEVLDHIGDRDVQLSRLITTFRTFVGGLKDDRQA ILGSLDQISELSVQTAGLVDGIREPFVSDIHQLREVARNLDNGKAELDRALQVLPIKLNKVGRTATYGSWFNFYLCHFQG RIRLPGGQSVPVDYPPNGVKVADRCDLG >Mature_348_residues MKMLDQRTSADLTKLLIFIVVTTLATSVLVATIGNLTFSSKHDYRAEFVDATGVVKGDDVRIAGVKVGTVKSVEVVDRTR ALVTFDVDDSASISQATHAAIRYRNLVGQRYIALTDEIGDVAPLPAGGTIPVSQTSPALDLTVLFNGFKPLFQALSPADL NQLSYEIVQVFQGEGGTLEGLLAHTASVTSTLASRDQLIGDLIDNLNEVLDHIGDRDVQLSRLITTFRTFVGGLKDDRQA ILGSLDQISELSVQTAGLVDGIREPFVSDIHQLREVARNLDNGKAELDRALQVLPIKLNKVGRTATYGSWFNFYLCHFQG RIRLPGGQSVPVDYPPNGVKVADRCDLG
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37691; Mature: 37691
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMLDQRTSADLTKLLIFIVVTTLATSVLVATIGNLTFSSKHDYRAEFVDATGVVKGDDV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHEECCCCEEECCCE RIAGVKVGTVKSVEVVDRTRALVTFDVDDSASISQATHAAIRYRNLVGQRYIALTDEIGD EEEEEEECCCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCC VAPLPAGGTIPVSQTSPALDLTVLFNGFKPLFQALSPADLNQLSYEIVQVFQGEGGTLEG CCCCCCCCEECCCCCCCCEEEEHHHHCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHH LLAHTASVTSTLASRDQLIGDLIDNLNEVLDHIGDRDVQLSRLITTFRTFVGGLKDDRQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHH ILGSLDQISELSVQTAGLVDGIREPFVSDIHQLREVARNLDNGKAELDRALQVLPIKLNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEHHC VGRTATYGSWFNFYLCHFQGRIRLPGGQSVPVDYPPNGVKVADRCDLG CCCCCCCCCHHHEEEEEECCEEECCCCCCCCCCCCCCCCEECCCCCCC >Mature Secondary Structure MKMLDQRTSADLTKLLIFIVVTTLATSVLVATIGNLTFSSKHDYRAEFVDATGVVKGDDV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHEECCCCEEECCCE RIAGVKVGTVKSVEVVDRTRALVTFDVDDSASISQATHAAIRYRNLVGQRYIALTDEIGD EEEEEEECCCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCC VAPLPAGGTIPVSQTSPALDLTVLFNGFKPLFQALSPADLNQLSYEIVQVFQGEGGTLEG CCCCCCCCEECCCCCCCCEEEEHHHHCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHH LLAHTASVTSTLASRDQLIGDLIDNLNEVLDHIGDRDVQLSRLITTFRTFVGGLKDDRQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHH ILGSLDQISELSVQTAGLVDGIREPFVSDIHQLREVARNLDNGKAELDRALQVLPIKLNK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEHHC VGRTATYGSWFNFYLCHFQGRIRLPGGQSVPVDYPPNGVKVADRCDLG CCCCCCCCCHHHEEEEEECCEEECCCCCCCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA