Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119714937

Identifier: 119714937

GI number: 119714937

Start: 728993

End: 730015

Strand: Direct

Name: 119714937

Synonym: Noca_0690

Alternate gene names: NA

Gene position: 728993-730015 (Clockwise)

Preceding gene: 119714936

Following gene: 119714938

Centisome position: 14.62

GC content: 68.13

Gene sequence:

>1023_bases
GTGGCCAGCTACGAGAACGCCACCGACGCCCGCGCCTGGGCCCGGCAGAACCTGAGTGGCGTGACCGGGTGCGTGATGCC
CTCGTTCACGTCGGACATGTCCGGGCTCAACGAGGCAGCCATCGTCCACGACATCCACCACGAGCTCGAGCTCGGGTTCA
GCGGCTTCCTCATCGTGGCCGAGTGCGGGACCACGCCCGAGGAGCTCGAACGCTTCATCGACATCTGCGTCGCGGAGAGT
GGCGAGGCGATCACGATCCTCCAGGCCGCCGAGCCCACGGTGGAGGCGAACGTCGAGCTGATCCGCCGGTCCGCCCGGGC
CGGCGTGGACCTGGTGATGCCGTCCTACCCGATCGGGTTCTACCCGCAGAGCGGCGAGGAGGTCGTCGCCTACACGCGAG
CCCTCGCCGAGGCCAGTCACCTCGGTCTGATCGTGTTCGCGATGAACCTCTGGAACTTCGAGCGCCTGCACCCCTCCGGC
TTTGCGGTCGACTGGCTGCGGCGACTCGTCGACGACGTGCCCAACGTCGTGGCGATCAAGAACGAGGTGGCCGAACCAGG
CGTGGCCGGCATCGCGGACGTGTTCCGCCGGTTCGCGGACGATGTGGTCGTCGCGGACCCTCTGGAGATGAACTCCCCGG
CGTGGATCACGACCTACGGCATGCGGTGGATGGGGACGTCCAACTACGAGTACTTCGGCGGCGATGTGCCCCGCTACTTC
GAGCTGCTCCAGGACCCGGAGCGCTACGACGAGGCCATGGAGATCTACTGGCGGTTGCACCCGGCCCGGCAGGCGACCGG
CTCGCTGATGAAGGAGGCCAACGGCGGCACCGTCTTCGTGCACCGAATGCTATGGAAGTACCAGGGCTGGCTGCAGGGCT
TCAACGGCGGCCCGGTGCGGCCGCCGCACATGCGGCTCCTGGACCGGCAGATGCGCACGCTGCGTGCGGCTGCGATCGCC
AGCGGCCTCGACGTCACCGACGAGCCGGACACCGAGTTCTTCCGCGGACGGATCCAGGCATGA

Upstream 100 bases:

>100_bases
GCCCGGACGGCGGCCTCTCGATCGCCTGACCGGCGGTCGACCGATCCACCCCGCACCCGACTACTCCGGCGCGCTCGCGC
CCCCACCGAAGGAGACCCTC

Downstream 100 bases:

>100_bases
TCGAGCCGGACGCCACGAAGGTCAGGGTGGTCAGCGCCGAGGAGGTGCTGCGGCACGGCACGCCGGCGCTCGCCCTGGCC
TCGGCCCGGACCGCGGCCGA

Product: dihydrodipicolinate synthase/N-acetylneuraminate lyase

Products: NA

Alternate protein names: Dihydrodipicolinate Synthase; Dihydrodipicolinate Synthase/N-Acetylneuraminate Lyase-Like

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MASYENATDARAWARQNLSGVTGCVMPSFTSDMSGLNEAAIVHDIHHELELGFSGFLIVAECGTTPEELERFIDICVAES
GEAITILQAAEPTVEANVELIRRSARAGVDLVMPSYPIGFYPQSGEEVVAYTRALAEASHLGLIVFAMNLWNFERLHPSG
FAVDWLRRLVDDVPNVVAIKNEVAEPGVAGIADVFRRFADDVVVADPLEMNSPAWITTYGMRWMGTSNYEYFGGDVPRYF
ELLQDPERYDEAMEIYWRLHPARQATGSLMKEANGGTVFVHRMLWKYQGWLQGFNGGPVRPPHMRLLDRQMRTLRAAAIA
SGLDVTDEPDTEFFRGRIQA

Sequences:

>Translated_340_residues
MASYENATDARAWARQNLSGVTGCVMPSFTSDMSGLNEAAIVHDIHHELELGFSGFLIVAECGTTPEELERFIDICVAES
GEAITILQAAEPTVEANVELIRRSARAGVDLVMPSYPIGFYPQSGEEVVAYTRALAEASHLGLIVFAMNLWNFERLHPSG
FAVDWLRRLVDDVPNVVAIKNEVAEPGVAGIADVFRRFADDVVVADPLEMNSPAWITTYGMRWMGTSNYEYFGGDVPRYF
ELLQDPERYDEAMEIYWRLHPARQATGSLMKEANGGTVFVHRMLWKYQGWLQGFNGGPVRPPHMRLLDRQMRTLRAAAIA
SGLDVTDEPDTEFFRGRIQA
>Mature_339_residues
ASYENATDARAWARQNLSGVTGCVMPSFTSDMSGLNEAAIVHDIHHELELGFSGFLIVAECGTTPEELERFIDICVAESG
EAITILQAAEPTVEANVELIRRSARAGVDLVMPSYPIGFYPQSGEEVVAYTRALAEASHLGLIVFAMNLWNFERLHPSGF
AVDWLRRLVDDVPNVVAIKNEVAEPGVAGIADVFRRFADDVVVADPLEMNSPAWITTYGMRWMGTSNYEYFGGDVPRYFE
LLQDPERYDEAMEIYWRLHPARQATGSLMKEANGGTVFVHRMLWKYQGWLQGFNGGPVRPPHMRLLDRQMRTLRAAAIAS
GLDVTDEPDTEFFRGRIQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37954; Mature: 37823

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASYENATDARAWARQNLSGVTGCVMPSFTSDMSGLNEAAIVHDIHHELELGFSGFLIVA
CCCCCCCHHHHHHHHHCCCCCHHHHCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEE
ECGTTPEELERFIDICVAESGEAITILQAAEPTVEANVELIRRSARAGVDLVMPSYPIGF
ECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCC
YPQSGEEVVAYTRALAEASHLGLIVFAMNLWNFERLHPSGFAVDWLRRLVDDVPNVVAIK
CCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHCHHHCCCCCCHHHHHHHHHHHCCCEEEEH
NEVAEPGVAGIADVFRRFADDVVVADPLEMNSPAWITTYGMRWMGTSNYEYFGGDVPRYF
HHHCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEECCEEEECCCCCCCCCCCHHHHH
ELLQDPERYDEAMEIYWRLHPARQATGSLMKEANGGTVFVHRMLWKYQGWLQGFNGGPVR
HHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCC
PPHMRLLDRQMRTLRAAAIASGLDVTDEPDTEFFRGRIQA
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
ASYENATDARAWARQNLSGVTGCVMPSFTSDMSGLNEAAIVHDIHHELELGFSGFLIVA
CCCCCCHHHHHHHHHCCCCCHHHHCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEE
ECGTTPEELERFIDICVAESGEAITILQAAEPTVEANVELIRRSARAGVDLVMPSYPIGF
ECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCC
YPQSGEEVVAYTRALAEASHLGLIVFAMNLWNFERLHPSGFAVDWLRRLVDDVPNVVAIK
CCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHCHHHCCCCCCHHHHHHHHHHHCCCEEEEH
NEVAEPGVAGIADVFRRFADDVVVADPLEMNSPAWITTYGMRWMGTSNYEYFGGDVPRYF
HHHCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEECCEEEECCCCCCCCCCCHHHHH
ELLQDPERYDEAMEIYWRLHPARQATGSLMKEANGGTVFVHRMLWKYQGWLQGFNGGPVR
HHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCC
PPHMRLLDRQMRTLRAAAIASGLDVTDEPDTEFFRGRIQA
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA