Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119714826

Identifier: 119714826

GI number: 119714826

Start: 591983

End: 592798

Strand: Direct

Name: 119714826

Synonym: Noca_0562

Alternate gene names: NA

Gene position: 591983-592798 (Clockwise)

Preceding gene: 119714812

Following gene: 119714827

Centisome position: 11.87

GC content: 68.75

Gene sequence:

>816_bases
ATGACGCCGTCGACTCAGGAAGAGATCTGGTTCCGGGCCGGCCGGATCATTAGGCCCAAGGACCCAGTCGTGCGTGACGG
AAACGTGATCTGGGCGGAGGAGTACGACGGCAAGGCGCCGCGAGCTCCGGGCCCTGATGACCTGCTCGACAGGTACTGCC
GTCTCGCTATCGCCACGCACGAGGAGATCGCTGAGTTCGTCGCGCTCAACGGCCTTCCCGAGGTCGGAGGCTTCGTGATG
CTCGGAGAAGAGAAGGCGCCGGATTGGCGGCAACGGTTCCCAGACGAGCCCGGCCGCGTGCCGGCCGATCGAATCAGGGA
GCACGCGAGGGGTGTCGCCGCTGCGCGCAGGGTGGGCGCAGCCCTGGCCGGGCGACGGCCGGGCGACCAGGCCGACTGGC
TCGACATGCACCGATTCCTGAACCCTGGCAAGCGGCGCCTGGCGTCCCGCCCGGGCTGGCTTGGCCAAGAGCTCGGCGAC
TGGTCCCTAGAGCGGGACAGGTTCGCCGGGCTGGTCTCCGACTTCCTAGCGAGCACCGGGGTCTACACCGGAGTCAACTG
GTCCGACTACAAGCGCCTCGCGATCGTTCCGGTCTCGAGCACCTTCCTCGGCGCCATCGCGCTGTTGCTCAGCCGCGAGA
TAGGTGCCGAGGGCAGATACGCCTGCTCCTCCTGCGGGTCGCCGGTCGATCGCCGCCGTCCGCCACGCGCGGGTGAGTCC
GTGTACTGCGATCGGCCCGAATGCAAGCGAGAGCAGCAGCGACGCAACCAAGCGGCATGGCGGGCGAAGAAGGCGGCGGA
GAGGGGCGGGTCCTGA

Upstream 100 bases:

>100_bases
GAGGTAGTCGGGCATTCCCATCTCCTCTCGTCGGGAGTTCCCTGGATCCCATCCTCATTCACCGTTGACATGACAGCAAT
TAACTGCTTATCTACATCCT

Downstream 100 bases:

>100_bases
TGGCCAGCATCAAGAAGCGCGACAACGGCAAGTGGCGGGCTCGCTATCGCGACGAGGGCGGCAAGGAGCACGCGCGGCAC
TTCGCGCGCAAGACCGACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MTPSTQEEIWFRAGRIIRPKDPVVRDGNVIWAEEYDGKAPRAPGPDDLLDRYCRLAIATHEEIAEFVALNGLPEVGGFVM
LGEEKAPDWRQRFPDEPGRVPADRIREHARGVAAARRVGAALAGRRPGDQADWLDMHRFLNPGKRRLASRPGWLGQELGD
WSLERDRFAGLVSDFLASTGVYTGVNWSDYKRLAIVPVSSTFLGAIALLLSREIGAEGRYACSSCGSPVDRRRPPRAGES
VYCDRPECKREQQRRNQAAWRAKKAAERGGS

Sequences:

>Translated_271_residues
MTPSTQEEIWFRAGRIIRPKDPVVRDGNVIWAEEYDGKAPRAPGPDDLLDRYCRLAIATHEEIAEFVALNGLPEVGGFVM
LGEEKAPDWRQRFPDEPGRVPADRIREHARGVAAARRVGAALAGRRPGDQADWLDMHRFLNPGKRRLASRPGWLGQELGD
WSLERDRFAGLVSDFLASTGVYTGVNWSDYKRLAIVPVSSTFLGAIALLLSREIGAEGRYACSSCGSPVDRRRPPRAGES
VYCDRPECKREQQRRNQAAWRAKKAAERGGS
>Mature_270_residues
TPSTQEEIWFRAGRIIRPKDPVVRDGNVIWAEEYDGKAPRAPGPDDLLDRYCRLAIATHEEIAEFVALNGLPEVGGFVML
GEEKAPDWRQRFPDEPGRVPADRIREHARGVAAARRVGAALAGRRPGDQADWLDMHRFLNPGKRRLASRPGWLGQELGDW
SLERDRFAGLVSDFLASTGVYTGVNWSDYKRLAIVPVSSTFLGAIALLLSREIGAEGRYACSSCGSPVDRRRPPRAGESV
YCDRPECKREQQRRNQAAWRAKKAAERGGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30221; Mature: 30090

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPSTQEEIWFRAGRIIRPKDPVVRDGNVIWAEEYDGKAPRAPGPDDLLDRYCRLAIATH
CCCCHHHHHHHHCCCEECCCCCCEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
EEIAEFVALNGLPEVGGFVMLGEEKAPDWRQRFPDEPGRVPADRIREHARGVAAARRVGA
HHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ALAGRRPGDQADWLDMHRFLNPGKRRLASRPGWLGQELGDWSLERDRFAGLVSDFLASTG
HHHCCCCCCCHHHHHHHHHHCHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCC
VYTGVNWSDYKRLAIVPVSSTFLGAIALLLSREIGAEGRYACSSCGSPVDRRRPPRAGES
CCCCCCHHHCCEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHCCCCCCCCC
VYCDRPECKREQQRRNQAAWRAKKAAERGGS
EECCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TPSTQEEIWFRAGRIIRPKDPVVRDGNVIWAEEYDGKAPRAPGPDDLLDRYCRLAIATH
CCCHHHHHHHHCCCEECCCCCCEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
EEIAEFVALNGLPEVGGFVMLGEEKAPDWRQRFPDEPGRVPADRIREHARGVAAARRVGA
HHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ALAGRRPGDQADWLDMHRFLNPGKRRLASRPGWLGQELGDWSLERDRFAGLVSDFLASTG
HHHCCCCCCCHHHHHHHHHHCHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCC
VYTGVNWSDYKRLAIVPVSSTFLGAIALLLSREIGAEGRYACSSCGSPVDRRRPPRAGES
CCCCCCHHHCCEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHCCCCCCCCC
VYCDRPECKREQQRRNQAAWRAKKAAERGGS
EECCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA