| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is cysW [H]
Identifier: 119714804
GI number: 119714804
Start: 574832
End: 575653
Strand: Direct
Name: cysW [H]
Synonym: Noca_0540
Alternate gene names: 119714804
Gene position: 574832-575653 (Clockwise)
Preceding gene: 119714803
Following gene: 119714805
Centisome position: 11.53
GC content: 70.44
Gene sequence:
>822_bases GTGGTTGAGGTCTCCACGCCCACCCGTTGGCTGCTGCGGGCGCTCGCCACCGGCTACGTGTTCTTCCTCGTGGCCTGGCC GGTCGGCCTGCTGGGACGCCGTACGTTCGACGGCGGCCCGGGGAACCTGACCGACATGCTCGCCGACGACCGTGCGGTCG CCGCGCTCCAGCTGACCGCCGTGGTCGCGTTCTGGGCGGTGGTCATCAACCTGGTCTTCGGGGTGACCGTCTCGATCCTC CTGGTGCGCTACGAGTTCCCGGGCAAGCGGGTGCTCTCGGCGCTGATCGACCTGCCGCTCTCGGTGTCTCCCGTCGTCGT CGGGCTCGCCCTGGTGCTGGTCTACAACGGCCGCGACGGCTGGTTCGGCACGACCCTGGAGGACAACGGCCTGCAGGTGA TCTTCAACAGCCCGGGCATGATCATGGCGACCTGCTTCGTCGCGCTGCCGCTGGTCATCCGCGAGGTGGTCCCCGTGCTC ACCGAGATCGGCGACGATCAGGAGCAGGCGGCCCGCAGCCTCGGTGCCGGCGCCCGGCAGACCTTCCTGCGGATCACCCT GCCGAGCATCAGGTGGGCCCTCGTGTACGGCGTGGTCCTCGCGCTGGCCCGGTCGATCGGCGAGTTCGGCGCCGTGAAGA TCGTCTCCGGCAACATCACCGGCCGCACCCAGACCGCGACCCTCGCGGTCGAGGCGAAGTACCAGAACTTCCAGCAGCCC GAGGCGTACGCGATCGCGTTCCTGCTCGCCCTGGTGTGCATCGCCTGCCTGGTCGTCGTCGCCGTCCTGCGCCCCCGGCG CGCCCACCGACCCCGCCCCTGA
Upstream 100 bases:
>100_bases GGCAGCAACACCTCGGCGGCCGCGGTCGCCTCGGTGATGCTGGCCGTCGCGTTGGTCGTGATCGTCTCCCTCGACCTCGT CCAGCGAAGGGTGGCCCGCC
Downstream 100 bases:
>100_bases AGGAGAGGAACCCCCGTGAGCATCGAAGTCTCAGGAGTCACCAAGCGGTTCGGTGACTTCGTCGCCCTCGACGACGTCAG CGTGTCGCTGCCCACCGGTC
Product: sulfate ABC transporter, inner membrane subunit
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MVEVSTPTRWLLRALATGYVFFLVAWPVGLLGRRTFDGGPGNLTDMLADDRAVAALQLTAVVAFWAVVINLVFGVTVSIL LVRYEFPGKRVLSALIDLPLSVSPVVVGLALVLVYNGRDGWFGTTLEDNGLQVIFNSPGMIMATCFVALPLVIREVVPVL TEIGDDQEQAARSLGAGARQTFLRITLPSIRWALVYGVVLALARSIGEFGAVKIVSGNITGRTQTATLAVEAKYQNFQQP EAYAIAFLLALVCIACLVVVAVLRPRRAHRPRP
Sequences:
>Translated_273_residues MVEVSTPTRWLLRALATGYVFFLVAWPVGLLGRRTFDGGPGNLTDMLADDRAVAALQLTAVVAFWAVVINLVFGVTVSIL LVRYEFPGKRVLSALIDLPLSVSPVVVGLALVLVYNGRDGWFGTTLEDNGLQVIFNSPGMIMATCFVALPLVIREVVPVL TEIGDDQEQAARSLGAGARQTFLRITLPSIRWALVYGVVLALARSIGEFGAVKIVSGNITGRTQTATLAVEAKYQNFQQP EAYAIAFLLALVCIACLVVVAVLRPRRAHRPRP >Mature_273_residues MVEVSTPTRWLLRALATGYVFFLVAWPVGLLGRRTFDGGPGNLTDMLADDRAVAALQLTAVVAFWAVVINLVFGVTVSIL LVRYEFPGKRVLSALIDLPLSVSPVVVGLALVLVYNGRDGWFGTTLEDNGLQVIFNSPGMIMATCFVALPLVIREVVPVL TEIGDDQEQAARSLGAGARQTFLRITLPSIRWALVYGVVLALARSIGEFGAVKIVSGNITGRTQTATLAVEAKYQNFQQP EAYAIAFLLALVCIACLVVVAVLRPRRAHRPRP
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=264, Percent_Identity=40.1515151515151, Blast_Score=192, Evalue=3e-50, Organism=Escherichia coli, GI1788764, Length=226, Percent_Identity=36.7256637168142, Blast_Score=150, Evalue=7e-38, Organism=Escherichia coli, GI1786980, Length=215, Percent_Identity=38.6046511627907, Blast_Score=100, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29488; Mature: 29488
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEVSTPTRWLLRALATGYVFFLVAWPVGLLGRRTFDGGPGNLTDMLADDRAVAALQLTA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHH VVAFWAVVINLVFGVTVSILLVRYEFPGKRVLSALIDLPLSVSPVVVGLALVLVYNGRDG HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCC WFGTTLEDNGLQVIFNSPGMIMATCFVALPLVIREVVPVLTEIGDDQEQAARSLGAGARQ CEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHH TFLRITLPSIRWALVYGVVLALARSIGEFGAVKIVSGNITGRTQTATLAVEAKYQNFQQP HEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEEEHHCCCCCC EAYAIAFLLALVCIACLVVVAVLRPRRAHRPRP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MVEVSTPTRWLLRALATGYVFFLVAWPVGLLGRRTFDGGPGNLTDMLADDRAVAALQLTA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHH VVAFWAVVINLVFGVTVSILLVRYEFPGKRVLSALIDLPLSVSPVVVGLALVLVYNGRDG HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCC WFGTTLEDNGLQVIFNSPGMIMATCFVALPLVIREVVPVLTEIGDDQEQAARSLGAGARQ CEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHH TFLRITLPSIRWALVYGVVLALARSIGEFGAVKIVSGNITGRTQTATLAVEAKYQNFQQP HEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEEEHHCCCCCC EAYAIAFLLALVCIACLVVVAVLRPRRAHRPRP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1708375 [H]