| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is hepT [H]
Identifier: 119714798
GI number: 119714798
Start: 566839
End: 567843
Strand: Direct
Name: hepT [H]
Synonym: Noca_0534
Alternate gene names: 119714798
Gene position: 566839-567843 (Clockwise)
Preceding gene: 119714797
Following gene: 119714802
Centisome position: 11.37
GC content: 74.03
Gene sequence:
>1005_bases GTGACCCCTGCTTCCTCCGGATTGGCGCTCCCCGTCACCGACGAGGCTCTCGCCTCCCGGTTGCGTGACCGCATGGCCGC GGTCGAGGTCGCCCTGGCCGGCCACGTGGTCAGCCGCGCGGGCTTCGTCAGCGAGACCGCCAGCCACCTGATGGCGGCCG GCGGGAAGCGGTTCCGGCCGCTGCTGGTGCTGCTGGCCGCCGAGACCGGGGAGCACCCCGACGCCGACGAGGTGATCACT GCGGCGTGCGTCGTGGAGCTGACCCACCTGGCGTCGCTGTACCACGACGACGTGATGGACGAGGCCGAGCTGCGCCGCGG CGCGGTCTCGGCCAACGCCCGTTGGGACAACCACGTCGCGATCCTCACCGGGGACTTCCTGTTCTCGAAGTCCTCCGAGC TGACGGCCGAGCTCGGCCCGGACGCCGTCCGCGTCCAGGCCCGGACGTTCACCCGGCTGGTCGAGGGCCAGATCCTGGAG ACCGTGCAGCCCGGGCCGGGCGAGGACCCGCTCGCCCACTACCTCGACGTGGTCGCCGGCAAGACCGGCTCGCTGATCGC GACCTCGGCGCACTACGGCGCCCGGTTCGGCGGCGCCAGCCGCGAGGTCGAGGAGGCGCTGACGGCGTACGGCGAGATCG TCGGCTCGGCGTTCCAGCTCTCCGACGACATCCTCGACATCGCCTCCGACTCCGGCGAGTCCGGGAAGACGCCCGGCACC GACCTCCGCGAGGGCGTGCCCACGCTGCCGGTGCTGATGGCGCGGGCCTCGACCGACCCCGCGGACGCGCGCCTGCTCGA GCTGCTCGGCGGCGACCTCACCGATGACGACCGGCACGCCGAGGCGCTGCGCCTGCTGCGGGCCCACCCGGCCCTCGGCC AGGCCCGCGACTACGTGATCGCCCGCGCGCACGAGGCCAAGGCCCACCTCGCCGTCGTACCCCCTGGCCCGGTGCGCGAC GCGCTCGAGGCGTTCGCCGACCTGGTGGCTGTCCGTTCCTCCTAG
Upstream 100 bases:
>100_bases CCTCGGCGACGATCTTCGTCGGCGTGGCCGCGACCCTGGTGCTCGGTGTCGTTCCCGGACCGGTGCTCGATCTCGCCGCC AATGCAGGACAATTCGTCAG
Downstream 100 bases:
>100_bases CTACTGGGTCTCGACCCGCCGGTCGCGGCTTCGTTCCTCAGCCGCGCGGCTTGCTCGACCTTCGCCAGCCCACGCGCCGC CCTCGTTCCTCGGGCGACGC
Product: trans-hexaprenyltranstransferase
Products: NA
Alternate protein names: HEPPP synthase subunit 2 [H]
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTPASSGLALPVTDEALASRLRDRMAAVEVALAGHVVSRAGFVSETASHLMAAGGKRFRPLLVLLAAETGEHPDADEVIT AACVVELTHLASLYHDDVMDEAELRRGAVSANARWDNHVAILTGDFLFSKSSELTAELGPDAVRVQARTFTRLVEGQILE TVQPGPGEDPLAHYLDVVAGKTGSLIATSAHYGARFGGASREVEEALTAYGEIVGSAFQLSDDILDIASDSGESGKTPGT DLREGVPTLPVLMARASTDPADARLLELLGGDLTDDDRHAEALRLLRAHPALGQARDYVIARAHEAKAHLAVVPPGPVRD ALEAFADLVAVRSS
Sequences:
>Translated_334_residues MTPASSGLALPVTDEALASRLRDRMAAVEVALAGHVVSRAGFVSETASHLMAAGGKRFRPLLVLLAAETGEHPDADEVIT AACVVELTHLASLYHDDVMDEAELRRGAVSANARWDNHVAILTGDFLFSKSSELTAELGPDAVRVQARTFTRLVEGQILE TVQPGPGEDPLAHYLDVVAGKTGSLIATSAHYGARFGGASREVEEALTAYGEIVGSAFQLSDDILDIASDSGESGKTPGT DLREGVPTLPVLMARASTDPADARLLELLGGDLTDDDRHAEALRLLRAHPALGQARDYVIARAHEAKAHLAVVPPGPVRD ALEAFADLVAVRSS >Mature_333_residues TPASSGLALPVTDEALASRLRDRMAAVEVALAGHVVSRAGFVSETASHLMAAGGKRFRPLLVLLAAETGEHPDADEVITA ACVVELTHLASLYHDDVMDEAELRRGAVSANARWDNHVAILTGDFLFSKSSELTAELGPDAVRVQARTFTRLVEGQILET VQPGPGEDPLAHYLDVVAGKTGSLIATSAHYGARFGGASREVEEALTAYGEIVGSAFQLSDDILDIASDSGESGKTPGTD LREGVPTLPVLMARASTDPADARLLELLGGDLTDDDRHAEALRLLRAHPALGQARDYVIARAHEAKAHLAVVPPGPVRDA LEAFADLVAVRSS
Specific function: Supplies heptaprenyl diphosphate, the precursor for the side chain of the isoprenoid quinone menaquinone-7 (MQ-7) [H]
COG id: COG0142
COG function: function code H; Geranylgeranyl pyrophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FPP/GGPP synthase family [H]
Homologues:
Organism=Homo sapiens, GI50659086, Length=299, Percent_Identity=32.7759197324415, Blast_Score=130, Evalue=2e-30, Organism=Escherichia coli, GI1789578, Length=311, Percent_Identity=31.5112540192926, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI1786623, Length=280, Percent_Identity=31.7857142857143, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17505681, Length=177, Percent_Identity=36.7231638418079, Blast_Score=115, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6319475, Length=297, Percent_Identity=27.9461279461279, Blast_Score=101, Evalue=1e-22, Organism=Drosophila melanogaster, GI24651612, Length=296, Percent_Identity=31.0810810810811, Blast_Score=124, Evalue=6e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014119 - InterPro: IPR000092 - InterPro: IPR017446 - InterPro: IPR008949 [H]
Pfam domain/function: PF00348 polyprenyl_synt [H]
EC number: =2.5.1.30 [H]
Molecular weight: Translated: 35141; Mature: 35010
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00444 POLYPRENYL_SYNTHET_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPASSGLALPVTDEALASRLRDRMAAVEVALAGHVVSRAGFVSETASHLMAAGGKRFRP CCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LLVLLAAETGEHPDADEVITAACVVELTHLASLYHDDVMDEAELRRGAVSANARWDNHVA EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCEEE ILTGDFLFSKSSELTAELGPDAVRVQARTFTRLVEGQILETVQPGPGEDPLAHYLDVVAG EEECCHHHCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC KTGSLIATSAHYGARFGGASREVEEALTAYGEIVGSAFQLSDDILDIASDSGESGKTPGT CCCCEEEECCHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DLREGVPTLPVLMARASTDPADARLLELLGGDLTDDDRHAEALRLLRAHPALGQARDYVI HHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH ARAHEAKAHLAVVPPGPVRDALEAFADLVAVRSS EECCCCCCEEEEECCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TPASSGLALPVTDEALASRLRDRMAAVEVALAGHVVSRAGFVSETASHLMAAGGKRFRP CCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LLVLLAAETGEHPDADEVITAACVVELTHLASLYHDDVMDEAELRRGAVSANARWDNHVA EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCEEE ILTGDFLFSKSSELTAELGPDAVRVQARTFTRLVEGQILETVQPGPGEDPLAHYLDVVAG EEECCHHHCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC KTGSLIATSAHYGARFGGASREVEEALTAYGEIVGSAFQLSDDILDIASDSGESGKTPGT CCCCEEEECCHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DLREGVPTLPVLMARASTDPADARLLELLGGDLTDDDRHAEALRLLRAHPALGQARDYVI HHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH ARAHEAKAHLAVVPPGPVRDALEAFADLVAVRSS EECCCCCCEEEEECCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7629164 [H]