| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714781
Identifier: 119714781
GI number: 119714781
Start: 548444
End: 549013
Strand: Direct
Name: 119714781
Synonym: Noca_0517
Alternate gene names: NA
Gene position: 548444-549013 (Clockwise)
Preceding gene: 119714779
Following gene: 119714783
Centisome position: 11.0
GC content: 73.16
Gene sequence:
>570_bases GTGATCGCGCTCGGGTTGCTCGCCCTCTTTGCGATCGCGCTGCCGAAGGCGGTCGGCGAGGACGACGGCGCTGCCCGGCT CGTGCTCCCGGACACCCTGCCGGGCGGGTACGCCGCCGCCGACGACCCCGCGTCCTTCGAGGGTGGCGACTACGCCGACC AGGCCGACTCGATCGCCGAGCAGGAGAAGTCCAACAGCGCCTACGGCAACCGGGTGCTGCCGGAGGTGCTGGGTCACGCG GCCGCCACCCGCACGTACGTCCTCGACGGCACCAAGGCCGTGTTCGTGCAGGTCTTCGACGCCGAGGGCGGCGCCTTCGC GCCGAACAGCATCCCCGACCCCGAGGCCTCCGGCGGCGCGCCCGCGAACGAGGTCACCAACGTCGGCGACGGGGTCTGCA TCCTCAGCTACGGGCAGGGGTCGACCGACGCCGGCCCGGCCGACCCGGTCTTCAGCCAGTGCCAGGTCACCCGGGACGGA CGCACCGTCCAGATCGGGGCGCCGGACGTCGACGCCGAGGATCTCGTCGCCACCGCGGACGGTCTGCTCGACGACCTCCA GGGCTCCTGA
Upstream 100 bases:
>100_bases CTCCGCACCCACGGGCCCGGTAGCGTCGCCGGACGTGACCAGCCGCACCTCCGCCCCGACGTCCGGCCGTCCCTCCACCT GGGCGGGGATCGCCATCGGC
Downstream 100 bases:
>100_bases GGACCCTGCCGAGGGTCCCGGTCAGGACCAGTACACGACGACCGTGTCGCCCACGCGGACCTGCCCGTAGAGCAGGCCGA GCGCGTCGTAGTCGCGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MIALGLLALFAIALPKAVGEDDGAARLVLPDTLPGGYAAADDPASFEGGDYADQADSIAEQEKSNSAYGNRVLPEVLGHA AATRTYVLDGTKAVFVQVFDAEGGAFAPNSIPDPEASGGAPANEVTNVGDGVCILSYGQGSTDAGPADPVFSQCQVTRDG RTVQIGAPDVDAEDLVATADGLLDDLQGS
Sequences:
>Translated_189_residues MIALGLLALFAIALPKAVGEDDGAARLVLPDTLPGGYAAADDPASFEGGDYADQADSIAEQEKSNSAYGNRVLPEVLGHA AATRTYVLDGTKAVFVQVFDAEGGAFAPNSIPDPEASGGAPANEVTNVGDGVCILSYGQGSTDAGPADPVFSQCQVTRDG RTVQIGAPDVDAEDLVATADGLLDDLQGS >Mature_189_residues MIALGLLALFAIALPKAVGEDDGAARLVLPDTLPGGYAAADDPASFEGGDYADQADSIAEQEKSNSAYGNRVLPEVLGHA AATRTYVLDGTKAVFVQVFDAEGGAFAPNSIPDPEASGGAPANEVTNVGDGVCILSYGQGSTDAGPADPVFSQCQVTRDG RTVQIGAPDVDAEDLVATADGLLDDLQGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19069; Mature: 19069
Theoretical pI: Translated: 3.62; Mature: 3.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIALGLLALFAIALPKAVGEDDGAARLVLPDTLPGGYAAADDPASFEGGDYADQADSIAE CHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH QEKSNSAYGNRVLPEVLGHAAATRTYVLDGTKAVFVQVFDAEGGAFAPNSIPDPEASGGA HHHCCCCCCCCHHHHHHHHHHHCEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC PANEVTNVGDGVCILSYGQGSTDAGPADPVFSQCQVTRDGRTVQIGAPDVDAEDLVATAD CHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHEEEECCCCEEEECCCCCCHHHHHHHHH GLLDDLQGS HHHHHHCCC >Mature Secondary Structure MIALGLLALFAIALPKAVGEDDGAARLVLPDTLPGGYAAADDPASFEGGDYADQADSIAE CHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH QEKSNSAYGNRVLPEVLGHAAATRTYVLDGTKAVFVQVFDAEGGAFAPNSIPDPEASGGA HHHCCCCCCCCHHHHHHHHHHHCEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC PANEVTNVGDGVCILSYGQGSTDAGPADPVFSQCQVTRDGRTVQIGAPDVDAEDLVATAD CHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHEEEECCCCEEEECCCCCCHHHHHHHHH GLLDDLQGS HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA